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Volumn 50, Issue 1, 2012, Pages 37-45

SYBR green-based real-time reverse transcription-PCR for typing and subtyping of all hemagglutinin and neuraminidase genes of avian influenza viruses and comparison to standard serological subtyping tests

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; CYANINE DYE; INFLUENZA VIRUS HEMAGGLUTININ; SYBR GREEN DYE; UNCLASSIFIED DRUG; VIRUS NUCLEOPROTEIN; VIRUS SIALIDASE;

EID: 84555188018     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.01195-11     Document Type: Article
Times cited : (27)

References (31)
  • 3
    • 61849099408 scopus 로고    scopus 로고
    • Rapid molecular subtyping by reverse transcription polymerase chain reaction of the neuraminidase gene of avian influenza A viruses
    • Fereidouni SR, et al. 2009. Rapid molecular subtyping by reverse transcription polymerase chain reaction of the neuraminidase gene of avian influenza A viruses. Vet. Microbiol. 135:253-260.
    • (2009) Vet. Microbiol. , vol.135 , pp. 253-260
    • Fereidouni, S.R.1
  • 4
    • 75149180076 scopus 로고    scopus 로고
    • Breeding-season sympatry facilitates genetic exchange among allopatric wintering populations of northern pintails in Japan and California
    • Flint P, et al. 2009. Breeding-season sympatry facilitates genetic exchange among allopatric wintering populations of northern pintails in Japan and California. Condor 111:591-598.
    • (2009) Condor , vol.111 , pp. 591-598
    • Flint, P.1
  • 6
    • 33847014076 scopus 로고    scopus 로고
    • Rapid and highly sensitive pathotyping of avian influenza A H5N1 virus by using real-time reverse transcription-PCR
    • Hoffmann B, et al. 2007. Rapid and highly sensitive pathotyping of avian influenza A H5N1 virus by using real-time reverse transcription-PCR. J. Clin. Microbiol. 45:600-603.
    • (2007) J. Clin. Microbiol. , vol.45 , pp. 600-603
    • Hoffmann, B.1
  • 7
    • 79952335435 scopus 로고    scopus 로고
    • Clade 2.3.2 avian influenza virus (H5N1), Qinghai lake region, China, 2009-2010
    • Hu X, et al. 2011. Clade 2.3.2 avian influenza virus (H5N1), Qinghai lake region, China, 2009-2010. Emerg. Infect. Dis. 17:560-562.
    • (2011) Emerg. Infect. Dis. , vol.17 , pp. 560-562
    • Hu, X.1
  • 8
    • 78649528224 scopus 로고    scopus 로고
    • Genetic analyses of H5N1 avian influenza virus in Mongolia, 2009 and its relationship with those of eastern Asia
    • Kang HM, et al. 2011. Genetic analyses of H5N1 avian influenza virus in Mongolia, 2009 and its relationship with those of eastern Asia. Vet. Microbiol. 147:170-175.
    • (2011) Vet. Microbiol. , vol.147 , pp. 170-175
    • Kang, H.M.1
  • 9
    • 79960171182 scopus 로고    scopus 로고
    • H5N1 subtype highly pathogenic avian influenza virus isolated form healthy mallard captured in South Korea
    • Kim HR, et al. 2011. H5N1 subtype highly pathogenic avian influenza virus isolated form healthy mallard captured in South Korea. Vet. Microbiol. 151:386-389.
    • (2011) Vet. Microbiol. , vol.151 , pp. 386-389
    • Kim, H.R.1
  • 10
    • 0034900095 scopus 로고    scopus 로고
    • Identification and subtyping of avian influenza viruses by reverse transcription-PCR
    • DOI 10.1016/S0166-0934(01)00301-9, PII S0166093401003019
    • Lee MS, Chang PC, Shien JH, Cheng MC, Shieh HK. 2001. Identification and subtyping of avian influenza viruses by reverse transcription-PCR. J. Virol. Methods 97:13-22. (Pubitemid 32718737)
    • (2001) Journal of Virological Methods , vol.97 , Issue.1-2 , pp. 13-22
    • Lee, M.-S.1    Chang, P.-C.2    Shien, J.-H.3    Cheng, M.-C.4    Shieh, H.K.5
  • 11
    • 0035126736 scopus 로고    scopus 로고
    • Typing and subtyping influenza virus using DNA microarrays and multiplex reverse transcriptase PCR
    • DOI 10.1128/JCM.39.2.696-704.2001
    • Li J, Chen S, Evans DH. 2001. Typing and subtyping influenza virus using DNA microarrays and multiplex reverse transcriptase PCR. J. Clin. Microbiol. 39:696-704. (Pubitemid 32150841)
    • (2001) Journal of Clinical Microbiology , vol.39 , Issue.2 , pp. 696-704
    • Li, J.1    Chen, S.2    Evans, D.H.3
  • 13
    • 63449119902 scopus 로고    scopus 로고
    • Panorama phylogenetic diversity and distribution of type A influenza virus
    • Liu S, et al. 2009. Panorama phylogenetic diversity and distribution of type A influenza virus. PLoS One 4:e5022.
    • (2009) PLoS One , vol.4
    • Liu, S.1
  • 15
    • 79951784156 scopus 로고    scopus 로고
    • Interspecific exchanges of avian influenza virus genes in Alaska: The influence of trans-hemispheric migratory tendency and breeding ground sympatry
    • Pearce JM, et al. 2011. Interspecific exchanges of avian influenza virus genes in Alaska: the influence of trans-hemispheric migratory tendency and breeding ground sympatry. Mol. Ecol. 20:1015-1025.
    • (2011) Mol. Ecol. , vol.20 , pp. 1015-1025
    • Pearce, J.M.1
  • 16
    • 67650661676 scopus 로고    scopus 로고
    • Neuraminidase-inhibition assay for the identification of influenza A virus neuraminidase subtype or neuraminidase antibody specificity
    • E. Spackman (ed.), Humana Press, Totowa, NJ
    • Pedersen J. 2008. Neuraminidase-inhibition assay for the identification of influenza A virus neuraminidase subtype or neuraminidase antibody specificity, p. 67-76. In E. Spackman (ed.), Avian influenza viurs. Humana Press, Totowa, NJ.
    • (2008) Avian Influenza Viurs , pp. 67-76
    • Pedersen, J.1
  • 17
    • 84934436683 scopus 로고    scopus 로고
    • Hemagglutination-inhibition test for avian influenza virus subtype identification and the detection and quantitation of serum antibodies to the avian influenza virus
    • E. Spackman (ed.), Humana Press, Totowa, NJ
    • Pedersen JC. 2008. Hemagglutination-inhibition test for avian influenza virus subtype identification and the detection and quantitation of serum antibodies to the avian influenza virus, p. 53-66. In E. Spackman (ed.), Avian influenza virus. Humana Press, Totowa, NJ.
    • (2008) Avian Influenza Virus , pp. 53-66
    • Pedersen, J.C.1
  • 18
    • 34447299235 scopus 로고    scopus 로고
    • Orthomyxoviridae: The viruses and their replication
    • D. M. Knipe and P. M. Howley (ed.), 5th ed. Lippincott Williams & Wilkins, Philadelphia, PA
    • Peter P, Shaw ML. 2007. Orthomyxoviridae: the viruses and their replication, p. 1647-1690. In D. M. Knipe and P. M. Howley (ed.), Fields virology, 5th ed. Lippincott Williams & Wilkins, Philadelphia, PA.
    • (2007) Fields Virology , pp. 1647-1690
    • Peter, P.1    Shaw, M.L.2
  • 19
    • 57749206195 scopus 로고    scopus 로고
    • A reverse transcription-PCR for subtyping of the neuraminidase of avian influenza viruses
    • Qiu BF, et al. 2009. A reverse transcription-PCR for subtyping of the neuraminidase of avian influenza viruses. J. Virol. Methods 155:193-198.
    • (2009) J. Virol. Methods , vol.155 , pp. 193-198
    • Qiu, B.F.1
  • 20
    • 79651470183 scopus 로고    scopus 로고
    • Transmission and reassortment of avian influenza viruses at the Asian-North American interface
    • Ramey AM, et al. 2010. Transmission and reassortment of avian influenza viruses at the Asian-North American interface. Virology 406:352-359.
    • (2010) Virology , vol.406 , pp. 352-359
    • Ramey, A.M.1
  • 21
    • 33745158157 scopus 로고
    • A simple method of estimating fifty percent endpoints
    • Reed L, Muench H. 1938. A simple method of estimating fifty percent endpoints. Am. J. Hyg. 27:493-497.
    • (1938) Am. J. Hyg. , vol.27 , pp. 493-497
    • Reed, L.1    Muench, H.2
  • 23
    • 67650930744 scopus 로고    scopus 로고
    • Association of increased pathogenicity of Asian H5N1 highly pathogenic avian influenza viruses in chickens with highly efficient viral replication accompanied by early destruction of innate immune responses
    • Suzuki K, et al. 2009. Association of increased pathogenicity of Asian H5N1 highly pathogenic avian influenza viruses in chickens with highly efficient viral replication accompanied by early destruction of innate immune responses. J. Virol. 83:7475-7486.
    • (2009) J. Virol. , vol.83 , pp. 7475-7486
    • Suzuki, K.1
  • 24
    • 0041625528 scopus 로고    scopus 로고
    • Influenza
    • Saif YM et al. (ed.), 11th ed. Iowa State Press, Ames, IA
    • Swayne DE, Halvorso DA. 2003. Influenza, p. 135-160. In Saif YM et al. (ed.), Diseases of poultry, 11th ed. Iowa State Press, Ames, IA.
    • (2003) Diseases of Poultry , pp. 135-160
    • Swayne, D.E.1    Halvorso, D.A.2
  • 25
    • 53649090488 scopus 로고    scopus 로고
    • Subtyping of avian influenza viruses H1 to H15 on the basis of hemagglutinin genes by PCR assay and molecular determination of pathogenic potential
    • Tsukamoto K, et al. 2008. Subtyping of avian influenza viruses H1 to H15 on the basis of hemagglutinin genes by PCR assay and molecular determination of pathogenic potential. J. Clin. Microbiol. 46:3048-3055.
    • (2008) J. Clin. Microbiol. , vol.46 , pp. 3048-3055
    • Tsukamoto, K.1
  • 26
    • 67650089629 scopus 로고    scopus 로고
    • Use of reverse transcriptase PCR to subtype N1 to N9 neuraminidase genes of avian influenza viruses
    • Tsukamoto K, et al. 2009. Use of reverse transcriptase PCR to subtype N1 to N9 neuraminidase genes of avian influenza viruses. J. Clin. Microbiol. 47:2301-2303.
    • (2009) J. Clin. Microbiol. , vol.47 , pp. 2301-2303
    • Tsukamoto, K.1
  • 27
    • 78049500910 scopus 로고    scopus 로고
    • Broad detection of diverse H5 and H7 hemagglutinin genes of avian influenza viruses by real-time reverse transcription-PCR using primer and probe sets containing mixed bases
    • Tsukamoto K, et al. 2010. Broad detection of diverse H5 and H7 hemagglutinin genes of avian influenza viruses by real-time reverse transcription-PCR using primer and probe sets containing mixed bases. J. Clin. Microbiol. 48:4275-4278.
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 4275-4278
    • Tsukamoto, K.1
  • 28
    • 50849112775 scopus 로고    scopus 로고
    • Highly pathogenic avian influenza virus (H5N1) isolated from whooper swans, Japan
    • Uchida Y, et al. 2008. Highly pathogenic avian influenza virus (H5N1) isolated from whooper swans, Japan. Emerg. Infect. Dis. 14:1427-1429.
    • (2008) Emerg. Infect. Dis. , vol.14 , pp. 1427-1429
    • Uchida, Y.1
  • 29
    • 0020791735 scopus 로고
    • Micro neuraminidase-inhibition assay for classification of influenza A virus neuraminidases
    • Van Deusen RA, Hinshaw VS, Senne DA, Pellacani D. 1983. Micro neuraminidase-inhibition assay for classification of influenza A virus neuraminidases. Avian Dis. 27:745-750.
    • (1983) Avian Dis. , vol.27 , pp. 745-750
    • Van Deusen, R.A.1    Hinshaw, V.S.2    Senne, D.A.3    Pellacani, D.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.