-
2
-
-
0030995455
-
-
Chaney, R., Malik, M., Li, Y., Brown, S., Brewer, E., Angleand, J., and Baker, A., 1997. Curr. Opin. Biotechnol., 8:279–284.
-
(1997)
Curr. Opin. Biotechnol.
, vol.8
, pp. 279-284
-
-
Chaney, R.1
Malik, M.2
Li, Y.3
Brown, S.4
Brewer, E.5
Angleand, J.6
Baker, A.7
-
4
-
-
0030907723
-
-
Raskin, I., Smith, R., and Salt, D., 1997. Curr. Opin. Biotechnol., 8:221–226.
-
(1997)
Curr. Opin. Biotechnol.
, vol.8
, pp. 221-226
-
-
Raskin, I.1
Smith, R.2
Salt, D.3
-
5
-
-
0030574278
-
-
Zenk, M., 1996. Gene, 179:21–30.
-
(1996)
Gene
, vol.179
, pp. 21-30
-
-
Zenk, M.1
-
6
-
-
0030574276
-
-
Silver, S., 1996. Gene, 179:9–19.
-
(1996)
Gene
, vol.179
, pp. 9-19
-
-
Silver, S.1
-
7
-
-
0037329191
-
-
Le Clainche, L., Plancque, G., Amekraz, B., Moulin, C., Pradines-Lecomte, C., Peltier, G., and Vita, C., 2003. J. Biol. Inorg. Chem., 8:334–340.
-
(2003)
J. Biol. Inorg. Chem.
, vol.8
, pp. 334-340
-
-
Le Clainche, L.1
Plancque, G.2
Amekraz, B.3
Moulin, C.4
Pradines-Lecomte, C.5
Peltier, G.6
Vita, C.7
-
8
-
-
0027052523
-
-
Chattopadhyaya, R., Meador, W., Means, A., and Quiocho, F., 1992. J. Mol. Biol., 228:1177–1192.
-
(1992)
J. Mol. Biol.
, vol.228
, pp. 1177-1192
-
-
Chattopadhyaya, R.1
Meador, W.2
Means, A.3
Quiocho, F.4
-
9
-
-
0024213513
-
-
Babu, Y., Bugg, C., and Cook, W., 1988. J. Mol. Biol., 204:191–204.
-
(1988)
J. Mol. Biol.
, vol.204
, pp. 191-204
-
-
Babu, Y.1
Bugg, C.2
Cook, W.3
-
10
-
-
0029160568
-
-
Zhang, M., Tanaka, T., and Ikura, M., 1995. Nat. Struct. Biol., 2:758–767.
-
(1995)
Nat. Struct. Biol.
, vol.2
, pp. 758-767
-
-
Zhang, M.1
Tanaka, T.2
Ikura, M.3
-
13
-
-
0027975838
-
-
Ban, C., Ramakrishnan, B., Ling, K., Kung, C., and Sundaralingam, M., 1994. Acta. Cryst., D50:50–63.
-
(1994)
Acta. Cryst.
, vol.D50
, pp. 50-63
-
-
Ban, C.1
Ramakrishnan, B.2
Ling, K.3
Kung, C.4
Sundaralingam, M.5
-
14
-
-
84986512474
-
-
Brooks, B., Bruccoleri, R., Olafson, B. D., States, D., Swaminathan, S., and Karplus, M., 1983. J. Comput. Chem., 4:187–217.
-
(1983)
J. Comput. Chem.
, vol.4
, pp. 187-217
-
-
Brooks, B.1
Bruccoleri, R.2
Olafson, B.D.3
States, D.4
Swaminathan, S.5
Karplus, M.6
-
16
-
-
0029912748
-
-
Jorgensen, W. L., Maxwell, D. S., and Tirado-Rives, J., 1996. J. Am. Chem. Soc., 118:11225–11236.
-
(1996)
J. Am. Chem. Soc.
, vol.118
, pp. 11225-11236
-
-
Jorgensen, W.L.1
Maxwell, D.S.2
Tirado-Rives, J.3
-
18
-
-
36449007836
-
-
Feller, S., Zhang, Y., Pastor, R., and Brooks, B., 1995. J Chem Phys, 103:4613–4621.
-
(1995)
J Chem Phys
, vol.103
, pp. 4613-4621
-
-
Feller, S.1
Zhang, Y.2
Pastor, R.3
Brooks, B.4
-
19
-
-
33645961739
-
-
Essman, V., Perera, L., Berkowitz, M., Darden, T., Lee, H., and Pedersen, L., 1995. J. Chem. Phys., 103:8577–8593.
-
(1995)
J. Chem. Phys.
, vol.103
, pp. 8577-8593
-
-
Essman, V.1
Perera, L.2
Berkowitz, M.3
Darden, T.4
Lee, H.5
Pedersen, L.6
-
22
-
-
36449000062
-
-
Martyna, G., Klein, M., and Tuckerman, M., 1992. J. Chem. Phys., 97:2635–2643.
-
(1992)
J. Chem. Phys.
, vol.97
, pp. 2635-2643
-
-
Martyna, G.1
Klein, M.2
Tuckerman, M.3
-
23
-
-
36449003554
-
-
Martyna, G., Tobias, D., and Klein, M., 1994. J. Chem. Phys., 101:4177–4189.
-
(1994)
J. Chem. Phys.
, vol.101
, pp. 4177-4189
-
-
Martyna, G.1
Tobias, D.2
Klein, M.3
-
26
-
-
0029878720
-
-
27–28
-
Humphrey, W., Dalke, A., and Schulten, K., 1996. J. Mol. Graph, 14:33–38. 27–28
-
(1996)
J. Mol. Graph
, vol.14
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
27
-
-
0034521981
-
-
rd
-
rd
-
(2000)
Acc. Chem. Res.
, vol.33
, pp. 889-897
-
-
Kollman, P.1
Massova, I.2
Reyes, C.3
Kuhn, B.4
Huo, S.5
Chong, L.6
Lee, M.7
Lee, T.8
Duan, Y.9
Wang, W.10
Donini, O.11
Cieplak, P.12
Srinivasan, J.13
Case, D.14
Cheatham, T.15
-
28
-
-
0034811498
-
-
Wang, J., Morin, P., Wang, W., and Kollman, P., 2001. J. Am. Chem. Soc., 123:5221–5230.
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 5221-5230
-
-
Wang, J.1
Morin, P.2
Wang, W.3
Kollman, P.4
-
29
-
-
0030040323
-
-
Sanner, M., Olson, A., and Spehner, J., 1996. Biopolymers, 38:305–320.
-
(1996)
Biopolymers
, vol.38
, pp. 305-320
-
-
Sanner, M.1
Olson, A.2
Spehner, J.3
-
30
-
-
32844457567
-
-
Sitkoff, D., Sharp, K., and Honig, B., 1994. J. Phys. Chem., 98:1978–1988.
-
(1994)
J. Phys. Chem.
, vol.98
, pp. 1978-1988
-
-
Sitkoff, D.1
Sharp, K.2
Honig, B.3
-
32
-
-
0013422976
-
-
University of Houston
-
Briggs, J., Madura, J., Davis, M., Gilson, M., Antosiewicz, J., Luty, B. A., Wade, R., Bagheri, B., Ilin, A., Tan, R., and McCammon, J., 1989. University of Houston Brownian Dynamics Program User's Guide and Programmer's Manual Released 5.1exp. University of Houston.
-
(1989)
University of Houston Brownian Dynamics Program User's Guide and Programmer's Manual Released 5.1exp.
-
-
Briggs, J.1
Madura, J.2
Davis, M.3
Gilson, M.4
Antosiewicz, J.5
Luty, B.A.6
Wade, R.7
Bagheri, B.8
Ilin, A.9
Tan, R.10
McCammon, J.11
-
35
-
-
0000304948
-
-
Tannor, D., Marten, B., Murphy, R., Friesner, R., Sitkoff, D., Nicholls, A., Ringnalda, M., I, Goddard, W. A., and Honig, B., 1994. J Am Chem Soc, 116:11875–11882.
-
(1994)
J Am Chem Soc
, vol.116
, pp. 11875-11882
-
-
Tannor, D.1
Marten, B.2
Murphy, R.3
Friesner, R.4
Sitkoff, D.5
Nicholls, A.6
Ringnalda, M.7
Goddard, W.A.8
Honig, B.9
-
36
-
-
0030180875
-
-
Marten, B., Kim, K., Cortis, C., Friesner, R., Murphy, R., Ringnalda, M., Sitkoff, D., and Honig, B., 1996. J Phys Chem, 100:11775–11788.
-
(1996)
J Phys Chem
, vol.100
, pp. 11775-11788
-
-
Marten, B.1
Kim, K.2
Cortis, C.3
Friesner, R.4
Murphy, R.5
Ringnalda, M.6
Sitkoff, D.7
Honig, B.8
-
39
-
-
84986468508
-
-
Woods, R., Khalil, M., Pell, W., Moffat, S., and Smith, V., 1990. J. Comput. Chem., 11:297–310.
-
(1990)
J. Comput. Chem.
, vol.11
, pp. 297-310
-
-
Woods, R.1
Khalil, M.2
Pell, W.3
Moffat, S.4
Smith, V.5
-
41
-
-
36148995600
-
-
Reed, A., Weinstock, R., and Weinhold, F., 1985. J. Chem. Phys., 83:735–746.
-
(1985)
J. Chem. Phys.
, vol.83
, pp. 735-746
-
-
Reed, A.1
Weinstock, R.2
Weinhold, F.3
-
43
-
-
0031943576
-
-
Wriggers, W., Mehler, E., Pitici, F., Weinstein, H., and Schulten, K., 1998. Biophys. J., 74:1622–1639.
-
(1998)
Biophys. J.
, vol.74
, pp. 1622-1639
-
-
Wriggers, W.1
Mehler, E.2
Pitici, F.3
Weinstein, H.4
Schulten, K.5
-
44
-
-
0037168294
-
-
Barton, N. P., Verma, C. S., and Caves, L. S.D., 2002. J. Phys. Chem. B., 106:11036–11040.
-
(2002)
J. Phys. Chem. B.
, vol.106
, pp. 11036-11040
-
-
Barton, N.P.1
Verma, C.S.2
Caves, L.S.D.3
-
45
-
-
0035029050
-
-
Vigil, D., Gallagher, S., Trewhella, J., and Garcia, A., 2001. Biophys. J., 80:2082–2092.
-
(2001)
Biophys. J.
, vol.80
, pp. 2082-2092
-
-
Vigil, D.1
Gallagher, S.2
Trewhella, J.3
Garcia, A.4
-
46
-
-
0025913645
-
-
Mehler, E., Pascual-Ahuir, J., and Weinstein, H., 1991. Protein Eng., 4:625–637.
-
(1991)
Protein Eng.
, vol.4
, pp. 625-637
-
-
Mehler, E.1
Pascual-Ahuir, J.2
Weinstein, H.3
-
47
-
-
0035038072
-
-
Elkins, K., Gatzeva-Topalova, P., and Nelson, D., 2001. Protein Eng., 14:115–126.
-
(2001)
Protein Eng.
, vol.14
, pp. 115-126
-
-
Elkins, K.1
Gatzeva-Topalova, P.2
Nelson, D.3
-
49
-
-
7044239742
-
-
Kollman, P., 1993. Chem. Rev., 93:2395–2417.
-
(1993)
Chem. Rev.
, vol.93
, pp. 2395-2417
-
-
Kollman, P.1
-
50
-
-
9344224511
-
-
Clementi, E. E., Raimondi, D., and Reinhardt, W., 1967. J. Chem. Phys., 47:1300
-
(1967)
J. Chem. Phys.
, vol.47
, pp. 1300
-
-
Clementi, E.E.1
Raimondi, D.2
Reinhardt, W.3
-
51
-
-
0003930168
-
-
Chichester: John Wiley and Sons
-
Marcus, Y., 1985. Ion Solvation. Chichester:John Wiley and Sons.
-
(1985)
Ion Solvation.
-
-
Marcus, Y.1
-
54
-
-
0025823438
-
-
Linse, S., Helmersson, A., and Forsen, S., 1991. J. Biol. Chem., 266:8050–8054.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 8050-8054
-
-
Linse, S.1
Helmersson, A.2
Forsen, S.3
-
55
-
-
0025950774
-
-
Falke, J., Snyder, E., Thatcher, K., and Voertler, C., 1991. Biochemistry, 30:8690–8697.
-
(1991)
Biochemistry
, vol.30
, pp. 8690-8697
-
-
Falke, J.1
Snyder, E.2
Thatcher, K.3
Voertler, C.4
-
57
-
-
0029959124
-
-
van der Spoel, D., de Groot, B., Hayward, S., Berendsen, H., and Vogel, H., 1996. Protein Science, 5:2044–2053.
-
(1996)
Protein Science
, vol.5
, pp. 2044-2053
-
-
van der Spoel, D.1
de Groot, B.2
Hayward, S.3
Berendsen, H.4
Vogel, H.5
-
58
-
-
0037397705
-
-
Thirumalai, D., Klimov, D., and Dima, R., 2003. Curr. Opin. Struct. Biol., 13:146–159.
-
(2003)
Curr. Opin. Struct. Biol.
, vol.13
, pp. 146-159
-
-
Thirumalai, D.1
Klimov, D.2
Dima, R.3
-
60
-
-
0036227252
-
-
Pikkemaat, M., Linssen, A., Berendsen, H., and Janssen, D., 2002. Protein Eng., 15:185–192.
-
(2002)
Protein Eng.
, vol.15
, pp. 185-192
-
-
Pikkemaat, M.1
Linssen, A.2
Berendsen, H.3
Janssen, D.4
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