메뉴 건너뛰기




Volumn 7074 LNCS, Issue , 2011, Pages 653-662

Faster approximate pattern matching in compressed repetitive texts

Author keywords

[No Author keywords available]

Indexed keywords

APPROXIMATE MATCHES; APPROXIMATE PATTERN MATCHING; CHARIKAR; EDIT DISTANCE; GENOMIC DATABASE; RANDOM ACCESS; STRAIGHT LINE PROGRAM; STRING DATABASE; SUBSTRING;

EID: 84055199877     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-25591-5_67     Document Type: Conference Paper
Times cited : (23)

References (18)
  • 1
  • 3
    • 0036767341 scopus 로고    scopus 로고
    • Approximate string matching: A simpler faster algorithm
    • Cole, R., Hariharan, R.: Approximate string matching: A simpler faster algorithm. SIAM Journal on Computing 31(6), 1761-1782 (2002)
    • (2002) SIAM Journal on Computing , vol.31 , Issue.6 , pp. 1761-1782
    • Cole, R.1    Hariharan, R.2
  • 4
    • 33846895874 scopus 로고    scopus 로고
    • A simple storage scheme for strings achieving entropy bounds
    • Ferragina, P., Venturini, R.: A simple storage scheme for strings achieving entropy bounds. Theoretical Computer Science 372(1), 115-121 (2007)
    • (2007) Theoretical Computer Science , vol.372 , Issue.1 , pp. 115-121
    • Ferragina, P.1    Venturini, R.2
  • 6
    • 77953789714 scopus 로고    scopus 로고
    • Grammar-Based Compression in a Streaming Model
    • Dediu, A.-H., Fernau, H., Martín-Vide, C. (eds.) LATA 2010. Springer, Heidelberg
    • Gagie, T., Gawrychowski, P.: Grammar-Based Compression in a Streaming Model. In: Dediu, A.-H., Fernau, H., Martín-Vide, C. (eds.) LATA 2010. LNCS, vol. 6031, pp. 273-284. Springer, Heidelberg (2010)
    • (2010) LNCS , vol.6031 , pp. 273-284
    • Gagie, T.1    Gawrychowski, P.2
  • 7
    • 71049176982 scopus 로고    scopus 로고
    • Genome 10K Community of Scientists: A proposal to obtain whole-genome sequence for 10,000 vertebrate species
    • Genome 10K Community of Scientists: A proposal to obtain whole-genome sequence for 10,000 vertebrate species. Journal of Heredity 100, 659-674 (2009)
    • (2009) Journal of Heredity , vol.100 , pp. 659-674
  • 8
    • 37849029611 scopus 로고    scopus 로고
    • Compressed Text Indexes with Fast Locate
    • Ma, B., Zhang, K. (eds.) CPM 2007. Springer, Heidelberg
    • González, R., Navarro, G.: Compressed Text Indexes with Fast Locate. In: Ma, B., Zhang, K. (eds.) CPM 2007. LNCS, vol. 4580, pp. 216-227. Springer, Heidelberg (2007)
    • (2007) LNCS , vol.4580 , pp. 216-227
    • González, R.1    Navarro, G.2
  • 10
    • 79960106566 scopus 로고    scopus 로고
    • Self-Indexing Based on LZ77
    • Giancarlo, R., Manzini, G. (eds.) CPM 2011. Springer, Heidelberg
    • Kreft, S., Navarro, G.: Self-Indexing Based on LZ77. In: Giancarlo, R., Manzini, G. (eds.) CPM 2011. LNCS, vol. 6661, pp. 41-54. Springer, Heidelberg (2011)
    • (2011) LNCS , vol.6661 , pp. 41-54
    • Kreft, S.1    Navarro, G.2
  • 11
    • 0001421462 scopus 로고
    • Fast parallel and serial approximate string matching
    • Landau, G.M., Vishkin, U.: Fast parallel and serial approximate string matching. Journal of Algorithms 10(2), 157-169 (1989)
    • (1989) Journal of Algorithms , vol.10 , Issue.2 , pp. 157-169
    • Landau, G.M.1    Vishkin, U.2
  • 13
    • 0037967496 scopus 로고    scopus 로고
    • An analysis of the Burrows-Wheeler transform
    • Manzini, G.: An analysis of the Burrows-Wheeler transform. Journal of the ACM 48(3), 407-430 (2001)
    • (2001) Journal of the ACM , vol.48 , Issue.3 , pp. 407-430
    • Manzini, G.1
  • 15
    • 0038238644 scopus 로고    scopus 로고
    • Application of Lempel-Ziv factorization to the approximation of grammar-based compression
    • Rytter, W.: Application of Lempel-Ziv factorization to the approximation of grammar-based compression. Theoretical Computer Science 302(1-3), 211-222 (2003)
    • (2003) Theoretical Computer Science , vol.302 , Issue.1-3 , pp. 211-222
    • Rytter, W.1
  • 16
    • 85041128864 scopus 로고    scopus 로고
    • Run-Length Compressed Indexes are Superior for Highly Repetitive Sequence Collections
    • Amir, A., Turpin, A., Moffat, A. (eds.) SPIRE 2008. Springer, Heidelberg
    • Sirén, J., Välimäki, N., Mäkinen, V., Navarro, G.: Run-Length Compressed Indexes are Superior for Highly Repetitive Sequence Collections. In: Amir, A., Turpin, A., Moffat, A. (eds.) SPIRE 2008. LNCS, vol. 5280, pp. 164-175. Springer, Heidelberg (2008)
    • (2008) LNCS , vol.5280 , pp. 164-175
    • Sirén, J.1    Välimäki, N.2    Mäkinen, V.3    Navarro, G.4
  • 17
    • 0020190931 scopus 로고
    • Data compression via textual substitution
    • Storer, J.A., Szymanski, T.G.: Data compression via textual substitution. Journal of the ACM 29(4), 928-951 (1982)
    • (1982) Journal of the ACM , vol.29 , Issue.4 , pp. 928-951
    • Storer, J.A.1    Szymanski, T.G.2
  • 18
    • 0017493286 scopus 로고
    • A universal algorithm for sequential data compression
    • Ziv, J., Lempel, A.: A universal algorithm for sequential data compression. IEEE Transactions on Information Theory 23(3), 337-343 (1977)
    • (1977) IEEE Transactions on Information Theory , vol.23 , Issue.3 , pp. 337-343
    • Ziv, J.1    Lempel, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.