Influence of prion variant and yeast strain variation on prion-molecular chaperone requirements

Prion

Volumn 5, Issue 4, 2011, Pages 238-244

  Hines, Justin K ^a,b   Higurashi, Takashi ^a,c   Srinivasan, Mathangi ^a   Craig, Elizabeth A ^a  

^a UNIVERSITY OF WISCONSIN MADISON   (United States)

^b LAFAYETTE COLLEGE   (United States)

^c Evec Inc   (Japan)

Author keywords

Cell stress; Heat shock; Hsp104; Hsp40; Neurodegenerative disease; PIN; Protein misfolding; Saccharomyces; Ssa

Indexed keywords

AMYLOID; CHAPERONE; PRION PROTEIN; RNQ PROTEIN; SIS1 PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; BIOSYNTHESIS; FUNGAL GENETICS; FUNGAL STRAIN; GENETIC VARIABILITY; IMMUNOBLOTTING; KINETICS; NONHUMAN; PLASMID; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRION; PROMOTER REGION; PROTEIN EXPRESSION; YEAST;

AMYLOID; GENETIC VARIATION; HSP40 HEAT-SHOCK PROTEINS; KINETICS; MODELS, MOLECULAR; PRIONS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS;

EID: 83755183712     PISSN: 19336896     EISSN: 1933690X     Source Type: Journal    
DOI: 10.4161/pri.5.4.17818     Document Type: Article

References (42)

1. Chiti F, Dobson CM. Protein misfolding, functional amyloid and human disease. Annu Rev Biochem 2006; 75:333-66. (Pubitemid 44118036)
2. Sondheimer N, Lindquist S. Rnq1: an epigenetic modifier of protein function in yeast. Mol Cell 2000; 5:163-72. (Pubitemid 30105445)
3. Derkatch IL, Bradley ME, Hong JY, Liebman SW. Prions affect the appearance of other prions: the story of [PIN(+)]. Cell 2001; 106:171-82. (Pubitemid 32772628)
4. Wickner RB, Masison DC, Edskes HK. [PSI] and [URE3] as yeast prions. Yeast 1995; 11:1671-85. (Pubitemid 26025608)
5. Derkatch IL, Chernoff YO, Kushnirov VV, Inge- Vechtomov SG, Liebman SW. Genesis and variability of [PSI] prion factors in Saccharomyces cerevisiae. Genetics 1996; 144:1375-86. (Pubitemid 26427888)
6. Crow ET, Li L. Newly identified prions in budding yeast, and their possible functions. Semin Cell Dev Biol 2011; 22(5):452-9.
7. Tuite MF, Koloteva-Levin N. Propagating prions in fungi and mammals. Mol Cell 2004; 14:541-52. (Pubitemid 38744574)
8. +]. Science 1995; 268:880-4.
9. Song Y, Wu YX, Jung G, Tutar Y, Eisenberg E, Greene LE, et al. Role for Hsp70 chaperone in Saccharomyces cerevisiae prion seed replication. Eukaryot Cell 2005; 4:289-97. (Pubitemid 40257129)
10. +] prion. EMBO J 2001; 20:2435-42.
11. Masison DC, Kirkland PA, Sharma D. Influence of Hsp70s and their regulators on yeast prion propagation. Prion 2009; 3:65-73.
12. Kampinga HH, Craig EA. The HSP70 chaperone machinery: J proteins as drivers of functional specificity. Nat Rev Mol Cell Biol 2010; 11:579-92.
13. Sahi C, Craig EA. Network of general and specialty J protein chaperones of the yeast cytosol. Proc Natl Acad Sci USA 2007; 104:7163-8. (Pubitemid 47186026)
14. Higurashi T, Hines JK, Sahi C, Aron R, Craig EA. Specificity of the J-protein Sis1 in the propagation of 3 yeast prions. Proc Natl Acad Sci USA 2008; 105:16596-601.
15. Tipton KA, Verges KJ, Weissman JS. In vivo monitoring of the prion replication cycle reveals a critical role for Sis1 in delivering substrates to Hsp104. Mol Cell 2008; 32:584-91.
16. Hines JK, Li X, Du Z, Higurashi T, Li L, Craig EA. [SWI], the prion formed by the chromatin remodeling factor Swi1, is highly sensitive to alterations in Hsp70 chaperone system activity. PLoS Genet 2011; 7:1001309.
17. Kirkland PA, Reidy M, Masison DC. Functions of yeast Hsp40 chaperone Sis1p dispensable for prion propagation but important for prion curing and protection from prion toxicity. Genetics 2011; 188:565-77.
18. +] seeds necessary for prion propagation. EMBO J 2007; 26:3794-803.
19. King CY. Supporting the structural basis of prion strains: induction and identification of [PSI] variants. J Mol Biol 2001; 307:1247-60.
20. Tanaka M, Chien P, Naber N, Cooke R, Weissman JS. Conformational variations in an infectious protein determine prion strain differences. Nature 2004; 428:323-8. (Pubitemid 38418803)
21. Tanaka M, Collins SR, Toyama BH, Weissman JS. The physical basis of how prion conformations determine strain phenotypes. Nature 2006; 442:585-9. (Pubitemid 44167919)
22. Bradley ME, Edskes HK, Hong JY, Wickner RB, Liebman SW. Interactions among prions and prion "strains" in yeast. Proc Natl Acad Sci USA 2002; 99:16392-9. (Pubitemid 35470984)
23. Sikorski RS, Boeke JD. In vitro mutagenesis and plasmid shuffling: from cloned gene to mutant yeast. Methods Enzymol 1991; 194:302-18.
24. Yan W, Craig EA. The glycine-phenylalanine-rich region determines the specificity of the yeast Hsp40 Sis1. Mol Cell Biol 1999; 19:7751-8. (Pubitemid 29493439)
25. +] prion aggregates are formed by small Sup35 polymers fragmented by Hsp104. J Biol Chem 2003; 278:49636-43.
26. Lopez N, Aron R, Craig EA. Specificity of class II Hsp40 Sis1 in maintenance of yeast prion [RNQ+]. Mol Biol Cell 2003; 14:1172-81. (Pubitemid 36337461)
27. Fan Q, Park KW, Du Z, Morano KA, Li L. The role of Sse1 in the de novo formation and variant determination of the [PSI+] prion. Genetics 2007; 177:1583-93. (Pubitemid 350277054)
28. Kryndushkin D, Wickner RB. Nucleotide exchange factors for Hsp70s are required for [URE3] prion propagation in Saccharomyces cerevisiae. Mol Biol Cell 2007; 18:2149-54. (Pubitemid 46911366)
29. Tanaka M, Weissman JS. An efficient protein transformation protocol for introducing prions into yeast. Methods Enzymol 2006; 412:185-200. (Pubitemid 44548581)
30. Wickner RB, Edskes HK, Shewmaker F, Nakayashiki T. Prions of fungi: inherited structures and biological roles. Nat Rev Microbiol 2007; 5:611-8. (Pubitemid 47074116)
31. Cox B, Ness F, Tuite M. Analysis of the generation and segregation of propagons: entities that propagate the [PSI+] prion in yeast. Genetics 2003; 165:23-33. (Pubitemid 37204053)
32. +] prion by guanidine hydrochloride. Proc Natl Acad Sci USA 2007; 104:11688-93.
33. Ness F, Ferreira P, Cox BS, Tuite MF. Guanidine hydrochloride inhibits the generation of prion "seeds" but not prion protein aggregation in yeast. Mol Cell Biol 2002; 22:5593-605. (Pubitemid 34755768)
34. Lewis JA, Elkon IM, McGee MA, Higbee AJ, Gasch AP. Exploiting natural variation in Saccharomyces cerevisiae to identify genes for increased ethanol resistance. Genetics 2010; 186:1197-205.
35. Osherovich LZ, Weissman JS. Multiple Gln/Asn-rich prion domains confer susceptibility to induction of the yeast [PSI(+)] prion. Cell 2001; 106:183-94. (Pubitemid 32772629)
36. Brachmann A, Baxa U, Wickner RB. Prion generation in vitro: amyloid of Ure2p is infectious. EMBO J 2005; 24:3082-92. (Pubitemid 41486344)
37. Mumberg D, Muller R, Funk M. Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds. Gene 1995; 156:119-22.
38. Inge-Vechtomov SG, Tikhodeev ON, Karpova TS. Selective systems for obtaining recessive ribosomal suppressors in saccharomycete yeasts. Genetika 1988; 24:1159-65.
39. Cox BS. [PSI], a cytoplasmic suppressor of super-suppression in yeast. Heredity 1965; 20:505-21.
40. Bousset L, Savistchenko J, Melki R. Assembly of the asparagine- and glutamine-rich yeast prions into protein fibrils. Curr Alzheimer Res 2008; 5:251-9. (Pubitemid 351840277)
41. Eaglestone SS, Ruddock LW, Cox BS, Tuite MF. Guanidine hydrochloride blocks a critical step in the propagation of the prion-like determinant [PSI(+)] of Saccharomyces cerevisiae. Proc Natl Acad Sci USA 2000; 97:240-4. (Pubitemid 30055815)
42. Abramoff MD, Magelhaes PJ, Ram SJ. Image Processing with ImageJ. Biophotonics International 2004; 11:36-42.