-
1
-
-
0002590589
-
Tetraploidy and the evolution of salmonid fishes
-
New York: Plenum Press, Turner BJ
-
Allendorf FW, Thorgaard GH. Tetraploidy and the evolution of salmonid fishes. Evolutionary Genetics of Fishes 1984, 1-53. New York: Plenum Press, Turner BJ.
-
(1984)
Evolutionary Genetics of Fishes
, pp. 1-53
-
-
Allendorf, F.W.1
Thorgaard, G.H.2
-
2
-
-
0035096956
-
Chromosome evolution in the Salmonidae (Pisces): an update
-
10.1017/S1464793100005613, 11325050
-
Phillips RB, Rab P. Chromosome evolution in the Salmonidae (Pisces): an update. Biol Rev 2001, 76:1-25. 10.1017/S1464793100005613, 11325050.
-
(2001)
Biol Rev
, vol.76
, pp. 1-25
-
-
Phillips, R.B.1
Rab, P.2
-
3
-
-
0030972920
-
Secondary tetrasomic segregation of MDH-B and preferential pairing of homeologues in rainbow trout
-
1207878, 9093860
-
Allendorf FW, Danzmann RG. Secondary tetrasomic segregation of MDH-B and preferential pairing of homeologues in rainbow trout. Genetics 1997, 145:1083-1092. 1207878, 9093860.
-
(1997)
Genetics
, vol.145
, pp. 1083-1092
-
-
Allendorf, F.W.1
Danzmann, R.G.2
-
5
-
-
0035344021
-
Yesterday's polyploids and the mystery of diploidization
-
Wolfe KH. Yesterday's polyploids and the mystery of diploidization. Nat Rev Genet 2001, 2:333-341.
-
(2001)
Nat Rev Genet
, vol.2
, pp. 333-341
-
-
Wolfe, K.H.1
-
6
-
-
60849126112
-
Distribution of ancestral proto-Actinopterygian chromosome arms within the genomes of 4R-derivative salmonid fishes (Rainbow trout and Atlantic salmon)
-
10.1186/1471-2164-9-557, 2632648, 19032764
-
Danzmann RG, Davidson EA, Ferguson MM, Gharbi K, Koop BF, Hoyheim B, Lien S, Lubieniecki KP, Moghadam HK, Park J, Phillips RB, Davidson WS. Distribution of ancestral proto-Actinopterygian chromosome arms within the genomes of 4R-derivative salmonid fishes (Rainbow trout and Atlantic salmon). BMC Genomics 2008, 9:557. 10.1186/1471-2164-9-557, 2632648, 19032764.
-
(2008)
BMC Genomics
, vol.9
, pp. 557
-
-
Danzmann, R.G.1
Davidson, E.A.2
Ferguson, M.M.3
Gharbi, K.4
Koop, B.F.5
Hoyheim, B.6
Lien, S.7
Lubieniecki, K.P.8
Moghadam, H.K.9
Park, J.10
Phillips, R.B.11
Davidson, W.S.12
-
7
-
-
1842715739
-
A microsatellite linkage map for Atlantic salmon (Salmo salar)
-
10.1111/j.1365-2052.2004.01091.x, 15025568
-
Gilbey J, Verspoor E, McLay A, Houlihan D. A microsatellite linkage map for Atlantic salmon (Salmo salar). Animal Genet 2004, 35:98-105. 10.1111/j.1365-2052.2004.01091.x, 15025568.
-
(2004)
Animal Genet
, vol.35
, pp. 98-105
-
-
Gilbey, J.1
Verspoor, E.2
McLay, A.3
Houlihan, D.4
-
8
-
-
1842766267
-
A linkage map of Atlantic salmon (Salmo salar) reveals an uncommonly large difference in recombination rate between the sexes
-
10.1111/j.1365-2052.2004.01097.x, 15025566
-
Moen T, Hoyheim B, Munck H, Gomez-Raya L. A linkage map of Atlantic salmon (Salmo salar) reveals an uncommonly large difference in recombination rate between the sexes. Animal Genet 2004, 35:81-92. 10.1111/j.1365-2052.2004.01097.x, 15025566.
-
(2004)
Animal Genet
, vol.35
, pp. 81-92
-
-
Moen, T.1
Hoyheim, B.2
Munck, H.3
Gomez-Raya, L.4
-
9
-
-
33646188556
-
A linkage map for brown trout (Salmo trutta): chromosome homeologies and comparative genome organization with other salmonid fish
-
1456399, 16452148
-
Gharbi K, Gautier A, Danzmann RG, Gharbi S, Sakamoto T, Høyheim B, Taggart JB, Cairney M, Powell R, Krieg F, Okamoto N, Ferguson MM, Holm LE, Guyomard R. A linkage map for brown trout (Salmo trutta): chromosome homeologies and comparative genome organization with other salmonid fish. Genetics 2006, 172:2405-2419. 1456399, 16452148.
-
(2006)
Genetics
, vol.172
, pp. 2405-2419
-
-
Gharbi, K.1
Gautier, A.2
Danzmann, R.G.3
Gharbi, S.4
Sakamoto, T.5
Høyheim, B.6
Taggart, J.B.7
Cairney, M.8
Powell, R.9
Krieg, F.10
Okamoto, N.11
Ferguson, M.M.12
Holm, L.E.13
Guyomard, R.14
-
10
-
-
18544392753
-
A microsatellite linkage map of rainbow trout (Oncorhynchus mykiss) characterized by large sex-specific differences in recombination rates
-
1461176, 10880492
-
Sakamoto T, Danzmann RG, Gharbi K, Howard P, Ozaki A, Khoo SK, Woram RA, Okamoto N, Ferguson MM, Holm LE, Guyomard R, Hoyheim B. A microsatellite linkage map of rainbow trout (Oncorhynchus mykiss) characterized by large sex-specific differences in recombination rates. Genetics 2000, 155:1331-1345. 1461176, 10880492.
-
(2000)
Genetics
, vol.155
, pp. 1331-1345
-
-
Sakamoto, T.1
Danzmann, R.G.2
Gharbi, K.3
Howard, P.4
Ozaki, A.5
Khoo, S.K.6
Woram, R.A.7
Okamoto, N.8
Ferguson, M.M.9
Holm, L.E.10
Guyomard, R.11
Hoyheim, B.12
-
11
-
-
32244432718
-
A comparative analysis of the rainbow trout genome with 2 other species of fish (Arctic charr and Atlantic salmon) within the tetraploid derivative Salmonidae family (subfamily: Salmoninae)
-
10.1139/g05-067, 16391673
-
Danzmann RG, Cairney M, Davidson WS, Ferguson MM, Gharbi K, Guyomard R, Holm LE, Leder E, Okamoto N, Ozaki A, Rexroad CE, Sakamoto T, Taggart JB, Woram RA. A comparative analysis of the rainbow trout genome with 2 other species of fish (Arctic charr and Atlantic salmon) within the tetraploid derivative Salmonidae family (subfamily: Salmoninae). Genome 2005, 48:1037-51. 10.1139/g05-067, 16391673.
-
(2005)
Genome
, vol.48
, pp. 1037-1051
-
-
Danzmann, R.G.1
Cairney, M.2
Davidson, W.S.3
Ferguson, M.M.4
Gharbi, K.5
Guyomard, R.6
Holm, L.E.7
Leder, E.8
Okamoto, N.9
Ozaki, A.10
Rexroad, C.E.11
Sakamoto, T.12
Taggart, J.B.13
Woram, R.A.14
-
12
-
-
33845710168
-
A type I and type II microsatellite linkage map of rainbow trout (Oncorhynchus mykiss) with presumptive coverage of all chromosome arms
-
10.1186/1471-2164-7-302, 1698487, 17137492
-
Guyomard R, Mauger S, Tabet-Canale K, Martineau S, Genet C, Krieg F, Quillet E. A type I and type II microsatellite linkage map of rainbow trout (Oncorhynchus mykiss) with presumptive coverage of all chromosome arms. BMC Genomics 2006, 7:302. 10.1186/1471-2164-7-302, 1698487, 17137492.
-
(2006)
BMC Genomics
, vol.7
, pp. 302
-
-
Guyomard, R.1
Mauger, S.2
Tabet-Canale, K.3
Martineau, S.4
Genet, C.5
Krieg, F.6
Quillet, E.7
-
13
-
-
58049215494
-
A second generation genetic map for rainbow trout (Oncorhynchus mykiss)
-
2605456, 19019240
-
Rexroad CE, Palti Y, Gahr SA, Vallejo RL. A second generation genetic map for rainbow trout (Oncorhynchus mykiss). BMC Genet 2008, 9:74. 2605456, 19019240.
-
(2008)
BMC Genet
, vol.9
, pp. 74
-
-
Rexroad, C.E.1
Palti, Y.2
Gahr, S.A.3
Vallejo, R.L.4
-
14
-
-
0033853966
-
Gene-centromere mapping of 312 loci in pink salmon by half-tetrad analysis
-
10.1139/g00-016, 10902719
-
Lindner KR, Seeb JE, Habicht C, Knudsen KL, Kretschmer E, Reedy DJ, Spruell P, Allendorf FW. Gene-centromere mapping of 312 loci in pink salmon by half-tetrad analysis. Genome 2000, 43:538-549. 10.1139/g00-016, 10902719.
-
(2000)
Genome
, vol.43
, pp. 538-549
-
-
Lindner, K.R.1
Seeb, J.E.2
Habicht, C.3
Knudsen, K.L.4
Kretschmer, E.5
Reedy, D.J.6
Spruell, P.7
Allendorf, F.W.8
-
15
-
-
41149162725
-
A genetic linkage map for coho salmon (Oncorhynchus kisutch)
-
10.1111/j.1365-2052.2008.01699.x, 18318791
-
McClelland EK, Naish KA. A genetic linkage map for coho salmon (Oncorhynchus kisutch). Anim Genet 2008, 39:169-179. 10.1111/j.1365-2052.2008.01699.x, 18318791.
-
(2008)
Anim Genet
, vol.39
, pp. 169-179
-
-
McClelland, E.K.1
Naish, K.A.2
-
16
-
-
71949101266
-
Single nucleotide polymorphism discovery in rainbow trout by deep sequencing of a reduced representation library
-
10.1186/1471-2164-10-559, 2790473, 19939274
-
Sánchez CC, Smith TP, Wiedmann RT, Vallejo RL, Salem M, Yao J, Rexroad CE. Single nucleotide polymorphism discovery in rainbow trout by deep sequencing of a reduced representation library. BMC Genomics 2009, 10:559. 10.1186/1471-2164-10-559, 2790473, 19939274.
-
(2009)
BMC Genomics
, vol.10
, pp. 559
-
-
Sánchez, C.C.1
Smith, T.P.2
Wiedmann, R.T.3
Vallejo, R.L.4
Salem, M.5
Yao, J.6
Rexroad, C.E.7
-
17
-
-
79551599953
-
Genotype calling and mapping of multisite variants using an Atlantic salmon iSelect SNP array
-
10.1093/bioinformatics/btq673, 21149341
-
Gidskehaug L, Kent M, Hayes BJ, Lien S. Genotype calling and mapping of multisite variants using an Atlantic salmon iSelect SNP array. Bioinformatics 2011, 27:303-310. 10.1093/bioinformatics/btq673, 21149341.
-
(2011)
Bioinformatics
, vol.27
, pp. 303-310
-
-
Gidskehaug, L.1
Kent, M.2
Hayes, B.J.3
Lien, S.4
-
18
-
-
34047264454
-
An extensive resource of single nucleotide polymorphism markers associated with Atlantic salmon (Salmo salar) expressed sequences
-
Hayes B, Laerdahl JK, Lien S, Moen T, Berg P, Hindar K, Davidson WS, Koop BF, Adzhubei A, Høyheim B. An extensive resource of single nucleotide polymorphism markers associated with Atlantic salmon (Salmo salar) expressed sequences. Aquaculture 2007, 265:82-90.
-
(2007)
Aquaculture
, vol.265
, pp. 82-90
-
-
Hayes, B.1
Laerdahl, J.K.2
Lien, S.3
Moen, T.4
Berg, P.5
Hindar, K.6
Davidson, W.S.7
Koop, B.F.8
Adzhubei, A.9
Høyheim, B.10
-
19
-
-
34547844090
-
SNP detection exploiting multiple sources of redundancy in large EST collections improves validation rates
-
10.1093/bioinformatics/btm154, 17463019
-
Hayes BJ, Nilsen K, Berg PR, Grindflek E, Lien S. SNP detection exploiting multiple sources of redundancy in large EST collections improves validation rates. Bioinformatics 2007, 23:1692-1693. 10.1093/bioinformatics/btm154, 17463019.
-
(2007)
Bioinformatics
, vol.23
, pp. 1692-1693
-
-
Hayes, B.J.1
Nilsen, K.2
Berg, P.R.3
Grindflek, E.4
Lien, S.5
-
20
-
-
69849109309
-
Assignment of Atlantic salmon (Salmo salar) linkage groups to specific chromosomes: conservation of large syntenic blocks corresponding to whole chromosome arms in rainbow trout (Oncorhynchus mykiss)
-
2734554, 19689812
-
Phillips RB, Keatley KA, Morasch MR, Ventura AB, Lubieniecki KP, Koop BF, Danzmann RG, Davidson WS. Assignment of Atlantic salmon (Salmo salar) linkage groups to specific chromosomes: conservation of large syntenic blocks corresponding to whole chromosome arms in rainbow trout (Oncorhynchus mykiss). BMC Genet 2009, 10:46. 2734554, 19689812.
-
(2009)
BMC Genet
, vol.10
, pp. 46
-
-
Phillips, R.B.1
Keatley, K.A.2
Morasch, M.R.3
Ventura, A.B.4
Lubieniecki, K.P.5
Koop, B.F.6
Danzmann, R.G.7
Davidson, W.S.8
-
21
-
-
44449161026
-
A linkage map of the Atlantic salmon (Salmo salar) based on EST-derived SNP markers
-
10.1186/1471-2164-9-223, 2405805, 18482444
-
Moen T, Hayes B, Baranski M, Berg PR, Kjoglum S, Koop BF, Davidson WS, Omholt SW, Lien S. A linkage map of the Atlantic salmon (Salmo salar) based on EST-derived SNP markers. BMC Genomics 2008, 9:223. 10.1186/1471-2164-9-223, 2405805, 18482444.
-
(2008)
BMC Genomics
, vol.9
, pp. 223
-
-
Moen, T.1
Hayes, B.2
Baranski, M.3
Berg, P.R.4
Kjoglum, S.5
Koop, B.F.6
Davidson, W.S.7
Omholt, S.W.8
Lien, S.9
-
22
-
-
73849088359
-
BAC-based upgrading and physical integration of a genetic SNP map in Atlantic salmon
-
10.1111/j.1365-2052.2009.01963.x, 19917045
-
Lorenz S, Brenna-Hansen S, Moen T, Roseth A, Davidson WS, Omholt SW, Lien S. BAC-based upgrading and physical integration of a genetic SNP map in Atlantic salmon. Anim Genet 2010, 41:48-54. 10.1111/j.1365-2052.2009.01963.x, 19917045.
-
(2010)
Anim Genet
, vol.41
, pp. 48-54
-
-
Lorenz, S.1
Brenna-Hansen, S.2
Moen, T.3
Roseth, A.4
Davidson, W.S.5
Omholt, S.W.6
Lien, S.7
-
23
-
-
3543040014
-
Complex SNP-related sequence variation in segmental genome duplications
-
10.1038/ng1401, 15247918
-
Fredman D, White SJ, Potter S, Eichler EE, Den Dunnen JT, Brookes AJ. Complex SNP-related sequence variation in segmental genome duplications. Nat Genet 2004, 36:861-866. 10.1038/ng1401, 15247918.
-
(2004)
Nat Genet
, vol.36
, pp. 861-866
-
-
Fredman, D.1
White, S.J.2
Potter, S.3
Eichler, E.E.4
Den Dunnen, J.T.5
Brookes, A.J.6
-
24
-
-
33746117256
-
Phylogenetic conservation of chromosome numbers in Actinopterygiian fishes
-
10.1007/s10709-005-5248-0, 16850236
-
Mank JE, Avise JC. Phylogenetic conservation of chromosome numbers in Actinopterygiian fishes. Genetica 2006, 127:321-327. 10.1007/s10709-005-5248-0, 16850236.
-
(2006)
Genetica
, vol.127
, pp. 321-327
-
-
Mank, J.E.1
Avise, J.C.2
-
25
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990, 215:403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
26
-
-
0030581163
-
Direct evidence of a role for heterochromatin in meiotic chromosome segregation
-
10.1016/S0092-8674(00)80084-7, 8689681
-
Dernburg AF, Sedat JW, Hawley RS. Direct evidence of a role for heterochromatin in meiotic chromosome segregation. Cell 1996, 86:135-46. 10.1016/S0092-8674(00)80084-7, 8689681.
-
(1996)
Cell
, vol.86
, pp. 135-146
-
-
Dernburg, A.F.1
Sedat, J.W.2
Hawley, R.S.3
-
27
-
-
79959526883
-
Optimum contribution selection using traditional best linear unbiased prediction and genomic breeding values in aquaculture breeding schemes
-
10.2527/jas.2009-2731, 21036937
-
Nielsen HM, Sonesson AK, Meuwissen TH. Optimum contribution selection using traditional best linear unbiased prediction and genomic breeding values in aquaculture breeding schemes. J Anim Sci 2011, 89:630-638. 10.2527/jas.2009-2731, 21036937.
-
(2011)
J Anim Sci
, vol.89
, pp. 630-638
-
-
Nielsen, H.M.1
Sonesson, A.K.2
Meuwissen, T.H.3
-
28
-
-
13444274822
-
QTL for body weight and condition factor in Atlantic salmon (Salmo salar): comparative analysis with rainbow trout (Oncorhynchus mykiss) and Arctic charr (Salvelinus alpinus)
-
10.1038/sj.hdy.6800590, 15483654
-
Reid DP, Szanto A, Glebe B, Danzmann RG, Ferguson MM. QTL for body weight and condition factor in Atlantic salmon (Salmo salar): comparative analysis with rainbow trout (Oncorhynchus mykiss) and Arctic charr (Salvelinus alpinus). Heredity 2005, 94:166-172. 10.1038/sj.hdy.6800590, 15483654.
-
(2005)
Heredity
, vol.94
, pp. 166-172
-
-
Reid, D.P.1
Szanto, A.2
Glebe, B.3
Danzmann, R.G.4
Ferguson, M.M.5
-
29
-
-
40849115094
-
Major quantitative trait loci affect resistance to infectious pancreatic necrosis in Atlantic salmon (Salmo salar)
-
10.1534/genetics.107.082974, 2248365, 18245341
-
Houston RD, Haley CS, Hamilton A, Guy DR, Tinch AE, Taggart JB, McAndrew BJ, Bishop SC. Major quantitative trait loci affect resistance to infectious pancreatic necrosis in Atlantic salmon (Salmo salar). Genetics 2008, 178:1109-1115. 10.1534/genetics.107.082974, 2248365, 18245341.
-
(2008)
Genetics
, vol.178
, pp. 1109-1115
-
-
Houston, R.D.1
Haley, C.S.2
Hamilton, A.3
Guy, D.R.4
Tinch, A.E.5
Taggart, J.B.6
McAndrew, B.J.7
Bishop, S.C.8
-
30
-
-
69049105456
-
Confirmation and fine-mapping of a major QTL for resistance to infectious pancreatic necrosis in Atlantic salmon (Salmo salar): population-level associations between markers and trait
-
10.1186/1471-2164-10-368, 2728743, 19664221
-
Moen T, Baranski M, Sonesson AK, Kjøglum S. Confirmation and fine-mapping of a major QTL for resistance to infectious pancreatic necrosis in Atlantic salmon (Salmo salar): population-level associations between markers and trait. BMC Genomics 2009, 10:368. 10.1186/1471-2164-10-368, 2728743, 19664221.
-
(2009)
BMC Genomics
, vol.10
, pp. 368
-
-
Moen, T.1
Baranski, M.2
Sonesson, A.K.3
Kjøglum, S.4
-
31
-
-
77956405939
-
Mapping of quantitative trait loci for flesh colour and growth traits in Atlantic salmon (Salmo salar)
-
Baranski M, Moen T, Våge DI. Mapping of quantitative trait loci for flesh colour and growth traits in Atlantic salmon (Salmo salar). Genet Sel Evol 2010, 4:17.
-
(2010)
Genet Sel Evol
, vol.4
, pp. 17
-
-
Baranski, M.1
Moen, T.2
Våge, D.I.3
-
32
-
-
77958150590
-
Sequencing the genome of the Atlantic salmon (Salmo salar)
-
2965382, 20887641
-
Davidson WS, Koop BF, Jones SJ, Iturra P, Vidal R, Maass A, Jonassen I, Lien S, Omholt SW. Sequencing the genome of the Atlantic salmon (Salmo salar). Genome Biol 2010, 11:403. 2965382, 20887641.
-
(2010)
Genome Biol
, vol.11
, pp. 403
-
-
Davidson, W.S.1
Koop, B.F.2
Jones, S.J.3
Iturra, P.4
Vidal, R.5
Maass, A.6
Jonassen, I.7
Lien, S.8
Omholt, S.W.9
-
33
-
-
79955595127
-
Documentation for CRI-MAP version 2.4
-
St. Louis, Mo., USA
-
Green P, Falls K, Crooks S. Documentation for CRI-MAP version 2.4. Washington University School of Medicine 1990, St. Louis, Mo., USA.
-
(1990)
Washington University School of Medicine
-
-
Green, P.1
Falls, K.2
Crooks, S.3
|