Protein flexibility of dimers: Do symmetric motions play a role in allosteric interactions?

AIP Conference Proceedings

Volumn 1368, Issue , 2011, Pages 135-138

  Schulze, Bernd ^a   Sljoka, Adnan ^b   Whiteley, Walter ^b  

^a FIELDS INSTITUTE   (Canada)

^b YORK UNIVERSITY   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 83655164525     PISSN: 0094243X     EISSN: 15517616     Source Type: Conference Proceeding    
DOI: 10.1063/1.3663478     Document Type: Conference Paper

References (9)

1. Jacobs, D. J. Rader, A. J., Kuhn, L. A. and Thorpe, M. F., Protein Flexibility Predictions Using Graph Theory Proteins: Structure, Function, and Genetics 44(2001), 150-165
2. Sljoka, A., Counting for Rigidity, Flexibility and Extensions via the Pebble Game Algorithm, Masters Thesis, York University, September 2006.
3. Whiteley, W., Counting Out to the Flexibility of Molecules, J. Physical Bioloigy 2(2005), 1-11.
4. FIRST, protein flexibility web server at flexweb.asu.edu
5. Schulze, B. and Whiteley, W., The orbit rigidity matrix of a symmetric framework, Discrete & Computational Geometry 46(2011), No. 3, 561-598.
6. Greer, A., Wauchope, O., Farina, N., Haberfield, P. and Liebman, J., Paradigms and paradoxes: Mechanisms for possible enhanced biological activity of bilaterally symmetrical chemicals, Structural Chemistry Volume 17, Number 4, 347-350, DOI: 10.1007
7. Lee, A. and Streinu, I, Pebble game algorithms and (k,l)-sparse graphs, Eurocomb 05, 2005. arXiv:math/0702129v1
8. Katoh, N. and Tanigawa, S., A Proof of the Molecular Conjecture, Discrete & Computational Geometry 45(2011) 647-700
9. Schulze, B., Symmery as a sufficient condition for a finite flex, SIAM Journal on Discrete Mathematics 24(2010), No. 4, 1291-1312.