-
1
-
-
75549090505
-
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
-
Caspi, R. et al. (2010) The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res., 38, D473-D479.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Caspi, R.1
-
2
-
-
78651275182
-
Reactome: a database of reactions, pathways and biological processes
-
Croft, D. et al. (2011) Reactome: a database of reactions, pathways and biological processes. Nucleic Acids Res., 39, D691-D697.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Croft, D.1
-
3
-
-
38549127678
-
ChEBI: a database and ontology for chemical entities of biological interest
-
Degtyarenko, K. et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res., 36, D344-D350.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Degtyarenko, K.1
-
4
-
-
77956664073
-
The BioPAX community standard for pathway data sharing
-
Demir, E. et al. (2010) The BioPAX community standard for pathway data sharing. Nat. Biotechnol., 28, 935-942.
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 935-942
-
-
Demir, E.1
-
5
-
-
47949099328
-
CellDesigner 3.5: a versatile modeling tool for biochemical networks
-
Funahashi, A. et al. (2008) CellDesigner 3.5: a versatile modeling tool for biochemical networks. Proceedings of the IEEE 96, 1254-1265.
-
(2008)
Proceedings of the IEEE
, vol.96
, pp. 1254-1265
-
-
Funahashi, A.1
-
6
-
-
75849158230
-
The Gene Ontology in 2010 extensions and refinements
-
Gene Ontology Consortium
-
Gene Ontology Consortium (2010) The Gene Ontology in 2010: extensions and refinements. Nucleic Acids Res., 38, D331-D335.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
-
7
-
-
0037342537
-
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models
-
Hucka, M. et al. (2003) The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinformatics, 19, 524-531.
-
(2003)
Bioinformatics
, vol.19
, pp. 524-531
-
-
Hucka, M.1
-
8
-
-
35348976204
-
Broadening the horizon-level 2.5 of the HUPO-PSI format for molecular interactions
-
Kerrien, S. et al. (2007) Broadening the horizon-level 2.5 of the HUPO-PSI format for molecular interactions. BMC Biol., 5, 44.
-
(2007)
BMC Biol
, vol.5
, pp. 44
-
-
Kerrien, S.1
-
9
-
-
68449103579
-
The Systems Biology Graphical Notation
-
Le Novère, N. et al. (2009) The Systems Biology Graphical Notation. Nat. Biotechnol., 27, 735-741.
-
(2009)
Nat. Biotechnol.
, vol.27
, pp. 735-741
-
-
Le Novère, N.1
-
10
-
-
83355169990
-
Ontologies and standards in bioscience research: for machine or for human
-
Mi, H. and Thomas, P.D. (2011) Ontologies and standards in bioscience research: for machine or for human. Front. Physio., 2, 5.
-
(2011)
Front. Physio.
, vol.2
, pp. 5
-
-
Mi, H.1
Thomas, P.D.2
-
11
-
-
75549084894
-
PANTHER version 7 improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium
-
Mi, H. et al. (2010) PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium. Nucleic Acids Res., 38, D204-D210.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Mi, H.1
-
12
-
-
70349548795
-
Integrating BioPAX pathway knowledge with SBML models
-
Ruebenacker, O. et al. (2009) Integrating BioPAX pathway knowledge with SBML models. IET Syst. Biol., 3, 317-328.
-
(2009)
IET Syst. Biol.
, vol.3
, pp. 317-328
-
-
Ruebenacker, O.1
-
13
-
-
58149186477
-
PID: the Pathway Interaction Database
-
Schaefer, C.F. et al. (2009) PID: the Pathway Interaction Database. Nucleic Acids Res., 37, D674-D679.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Schaefer, C.F.1
|