Breeding, genetic and genomic of citrus for disease resistance;Melhoramento, Genética e Genômica de Citros Para Resistência a Doenças

Revista Brasileira de Fruticultura

Volumn 33, Issue SPEC. ISSUE 1, 2011, Pages 158-172

  Machado, Marcos A ^a   Cristofani Yaly, Mariângela ^a   Bastianel, Marinês ^a  

^a INSTITUTO AGRONÔMICO   (Brazil)

Author keywords

Citriculture; Hybrids; Improvement

Indexed keywords

EID: 83255193385     PISSN: 01002945     EISSN: None     Source Type: Journal    
DOI: 10.1590/s0100-29452011000500019     Document Type: Article

References (57)

1. BASTIANEL, M.; OLIVEIRA, A.C.; CRISTOFANI, M.; MACHADO, M.A. Diversidade genética entre híbridos de laranja Pêra com tangor Murcott avaliada por AFLP e RAPD. Pesquisa Agropecuária Brasi-leira, Brasília, v. 42, n. 5, p. 779-784, 2006.
2. BASTIANEL, M.; CRISTOFANI-YALY, M.; OLI-VEIRA, A.C.; FREITAS-ASTÚA, J.; GARCIA, A; A.F.; RESENDE, M.D.V.; RODRIGUES, V.; MACHADO, M.A. Quantitative trait loci analysis of citrus leprosis resistance in an interspecific backcross family of (Citrus reticulata Blanco C. sinensis L. Osbeck) C. sinensis L. Osb. Euphytica, Wageningen, v.169, p.101-111, 2009.
3. BOAVA, L. P; CRISTOFANI-YALY, M.; MAFRA, V. S; KUBO, K.S.; KISHI, L. T; TAKITA, M. A; RIBEIRO-A. M.; MACHADO, M.A. Global gene expression of Poncirus trifoliata, Citrus sunki and their hybrids under infection of Phytophthora parasit-ica. BMC Genomics, Chichester, v. 12, p. 39, 2011.
4. CAI, Q; GUY, C.L.; MOORE, G.A. Extension of the linkage map in Citrus using random amplified polymorphic DNA (RAPD) markers and RFLP map-ping of cold-acclimation-responsive loci. Theoreti-cal Applied Genetics, Berlin, v.89, p.606-14, 1994.
5. CHENG, F.S.; ROOSE, M.L. Origin and inheritance of dwarfing by the citrus rootstock Poncirus trifoliata Flying Dragon. Journal of the American Society for Horticultural Science, Alexandria, v.120, p.286-91, 1995.
6. CRISTOFANI, M.; MACHADO, M. A; GRAT-TAPAGLIA, D. Genetic linkage maps of Citrus sunki Hort. ex. Tan. and Poncirus trifoliata (L.) Raf. and mapping of citrus tristeza virus resistance gene. Euphytica, Dordrecht, v.109, p. 25-32, 1999.
7. CRISTOFANI, M.; MACHADO, M.A.; NOVELLI, V.M.; SOUZA, A.A.; TARGON, M.L.P.N. Construc-tion of linkage maps of Poncirus trifoliata and Citrus sunki based on microsatellite markers. In: INTERNA-TIONAL SOCIETY CITRICULTURE CONGRESS, 9., 2000, Orlando. Proceedings... p.175-8
8. CRISTOFANI, M.; NOVELLI, V.M.; OLIVEIRA, A.C.; OTAVIANO, A.R.; SOUZA, A.A.; MACHA-DO, M.A. Identificação de híbridos de cruzamentos interespecíficos em citros utilizando marcadores RAPD e SSR. Laranja, Cordeirópolis, v.22, p. 231-241, 2001.
9. CRISTOFANI-YALY, M.; NOVELLI, V. M.; BAS-TIANEL, M.; MACHADO, M.A. Transferability and level of heterozygosity of microsatellite markers in citrus species. Plant Molecular Biology Reporter, Dordrecht, v. 29, n.2, p.418-42, 2011.
10. DENG, Z., HUANG, S.; XIAO, S.; GMITTER, F.G. Development and characterization of SCAR mark-ers linked to the citrus tristeza virus resistance gene from Poncirus trifoliata. Genome, Ottawa, v.40, p.697-704, 1997.
11. DENG, Z.; HUANG, S.; LING, P.; YU, C.; TAO, Q.; CHEN, C.; WENDELL, M. K.; ZHANG, H.B.; GMITTER, F.G. JR. Fine genetic mapping and BAC contig development for the citrus tristeza virus resistance gene locus in Poncirus trifoliata (Raf.). Molecular Genetics and Genomics, Berlin, v.265, p.739-47, 2001.
12. DOMINGUEZ, A.; FAGOAGA, C.; NAVARRO, L.; MORENO, P.; PEÑA, L. Efficient production of transgenic citrus plants expressing the coat protein gene of citrus tristeza virus. Molecular Genetics and Genomics, Berlin, v.267, p. 544-56, 2002.
13. DURHAN, R.E.; LIOU, P.C.; GMITTER, JR. F.G.; MOORE, G.A. Linkage of restriction frag-ment length polymorphism and isozymes in Citrus. Theoretical and Applied Genetics, Berlin, v.84, p. 39-48, 1992.
14. FANG, D.Q., FEDERICI, C.T., ROOSE, M.L. De-velopment of molecular markers linked to a gene controlling fruit acidity in citrus. Genome, Ottawa, v.40, p. 841-9, 1997.
15. FANG, D.Q.; FEDERICI, C.T.; ROOSE, M.L. A high-resolution map of citrus tristeza virus resistance gene region in Poncirus trifoliata (L.) Raf. Genetics, Bethesda, v.150, p.883-9, 1998.
16. FREITAS-ASTÚA, J.; BASTIANEL, M.; LOCALI-FABRIS, E.C.; NOVELLI, V. M.; SILVA-PINHATI, A.C.; BASILIO, A.C.P.; TARGON, M.L.P.N.; MACHADO, M.A. Differentially expressed stress-related genes in the compatible citrus-Citrus leprosis virus interaction. Genetics and Molecular Biology, Ribeirão Preto, v.30, p. 980-1018, 2007.
17. GARCIA, R.; ASINS, M.J.; FORNER, J.; CAR-BONELL, E.A. Genetic analysis of apomixis in Cit-rus and Poncirus by molecular markers. Theoretical and Applied Genetics, Berlin, v.99, p. 511-8, 1999.
18. GARCÍA, M.R.; ASÍNS, M.J.; CARBONELL, E.A. QTL analysis of yield and seed number in Citrus. Theoretical and Applied Genetics, Berlin, v.101, p.487-493, 2000.
19. GMITTER JR., F.G.; XIAO, S.Y.; HUANG, S.;HU., X. L; GARNSEY, S.M.; DENG, Z. A localized link-age map of the citrus virus resistance gene region. Theoretical and Applied Genetics, Berlin, v.92, p.688-695, 1996.
20. GOLDSCHMIDT, E.E. Regulatory aspects of chloro-chromoplast interconversions in senescing Citrus fruit peel. Israel Journal of Botany, Jerusalem, v.37, p.123-30, 1988.
21. GROSS, J. Carotenoids: pigments in fruits. London: Academic Press, 1987.
22. GUTIÉRREZ-E, M.A.; LUTH, D.; MOORE, G.A. Factors affecting Agrobacterium-mediated transfor-mation in Citrus and production of sour orange (Cit-rus aurantium L.) plants expressing the coat protein gene of citrus tristeza virus. Plant Cell Reports, Berlin, v.16, p.745-53, 1997.
23. HIDAKA, T.; OMURA, M. Transformation of Cit-rus protoplasts by electroporation. Journal of the Japanese Society for Horticultural Science, Tokyo, v.62, p.371-6, 1993.
24. HIDAKA, T.; OMURA, M.; UGAKI, M.; TOMI-YAMA, M. Agrobacterium-Mediated Transforma-tion and Regeneration of Citrus spp from suspension cells. Japanese Journal of Breeding, Tokyo, v.40, p.199-207,1990.
25. HIRAI, M.Y.; YANO, M.; GOODENOWE, D.B.; KANAYA, S.; KIMURA. T.; AWAZUHARA, M.; ARITA, M.; FUJIWARA, T.; SAITO, K. Integration of transcriptomics and metabolomics for under-standing of global responses to nutritional stresses in Arabidopsis thaliana. Proceedings of the Na-tional Academy of Sciences of the United States of America, Washington, v.101, p.10205-10, 2004.
26. JARREL, D.C.; ROOSE, M.L.; TRAUGH, S.N.; KUPPER, R.S. A genetic map of citrus based on the segregation of isozymes and RFLPs in an intergeneric cross. Theoretical and Applied Genetics, Berlin, v.84, p.49-56, 1992.
27. KANEYOSHI, J.; KOBAYASHI, S.; NAKAMURA, Y. A simple and efficient gene transfer system of trifoliate orange. Plant Cell Reports, Berlin, v.13, p.541-5, 1994.
28. KANYUKAKATO, M.; IKOMA, Y.; MATSU-MOTO, H.; SIGIURA, M.; HYODO, H.; YANO, M. Accumulation of carotenoids and expression of carotenoid biosynthetic genes during maturation in citrus fruit. Plant Physiology, Minneapolis, v.134, p. 824-37, 2004.
29. Ing, P.; Duncan, L.W.; Deng, Z.; Dunn, D.; Hu, X.; Huang, S.; Gmitter, F.G. Inheritance of citrus nematode resistance and its linkage with molecular markers. Theoretical and Applied Genetics, Berlin, v.100, p.1010-7, 2000.
30. LIOU, P.C. A molecular study of the Citrus genome through restriction fragment length polymor-phism and isozyme mapping. 1990. Dissertation (PhD)-University of Florida, Gainsville, 1990.
31. LOCALI, E.C.; FREITAS-ASTUA, J.; SOUZA, A.A.; TAKITA, M.A.; ASTUA-MONGE, G.; AN-TONIOLI, R.; KITAJIMA, E.W.; MACHADO M.A. Development of a molecular tool for the diagnosis of leprosis, a major threat to the citrus production in the Americas. Plant Disease, Saint Paul, v.87, p.1317-21, 2003.
32. LURO, F.; LAIGRET, F.; LORIEUX, M.; OL-LITRAULT, P. Citrus genome mapping with mo-lecular markers: two maps obtained by segregation analysis of progeny of one intergeneric cross. In: INTERNATIONAL SOCIETY OF CITRICULTURE CONGRESS, 2., 1996, Sun City. Proceedings.... p.862-6.
33. MACHADO, M.A.; COLLETA FILHO, H.D.; TARGON, M.L.N.P.; POMPEU JR., J. Genetic relationship of Mediterranean mandarins (Citrus deliciosa Tenore) using RAPD markers. Euphytica, Wageningen, v.92, p.321-6, 1996.
34. MACHADO, M.A.; CRISTOFANI-YALY, M.; AMARAL, A.M.; OLIVEIRA, A.C. Genética, me-lhoramento e biotecnologia. In: MATTOS JUNIOR; D.; NEGRI. J.D.; PIO, R. M; POMPEU JUNIOR, J. (Org.). Citros. Campinas: Instituto Agronômico e Fundag, 2005. p. 223-264.
35. MESTRE, P.F.; ASÍNS, M.J.; PINA, J.A.; CAR-BONELL, E.A.; NAVARRO, L. Molecular markers flanking citrus tristeza virus resistance gene from Poncirus trifoliata (L.) Raf. Theoretical and Ap-plied Genetics, Berlin, v.94, p.458-64, 1997.
36. MOORE, G.A.; JACANO, C.C.; NEIDIGH, J.L. Agrobacterium-mediated transformation of citrus stem segments and regeneration of transgenic plants. Plant Cell Reports, Berlin, v.11, p. 238-42, 1992.
37. MOORE, G.A.; LUTH, D.; KAPLAN, F.; GUTIÉR-REZ-E, M.A. Genetic transformation in citrus. In: JAIN, S.M.; MINOCHA, S.C. (Ed.). Molecular biology of woody plants. Boston: Kluwer Academic Press, 2000. v.2, p. 227-243.
38. NOVELLI, V.M.; CRISTOFANI, M.; MACHADO, M.A. Evaluation of microsatellite markers in culti-vars of sweet orange Citrus sinensis (L.) Osbeck. Acta Horticulturae, The Hague, v. 535, p.47-50., 2000.
39. NOVELLI, V.M.; CRISTOFANI, M.; SOUZA, A.A.; MACHADO, M.A. Development and characteriza-tion of polymorphic simple sequence repeats (SSRs) in sweet orange (Citrus sinensis L. Osbeck). Genet-ics and Molecular Biology, Ribeirão Preto, v.29, n.1, p.90-96, 2006;
40. NOVELLI, V.M.; TAKITA, M.A.; MACHADO, M.A. Identification and analysis of Single Nucleo-tide Polymorphisms (SNPs) in Citrus. Euphytica, Wageningen, v.138, p. 227-237, 2004b.
41. NUNES, L.R.; ROSATO, Y.B.; MUTO, N.H.; YANAI, G.M.; DA SILVA, V.S.; LEITE, D.B.; GONÇALVES, E.R.; DE SOUZA, A.A.; COLLETA-FILHO, H.D.; MACHADO, M.A.; LOPES, S.L.; COSTA DE OLIVEIRA, R. Microarray analyses of Xylella fastidiosa provide evidence for coordi-nated transcription control of laterally transferred elements. Genome Research, Cold Spring Harbor, v.13, p.570-8, 2003.
42. OLIVEIRA, A.C.; BASTIANEL, M.L.; CRISTO-FANI, M.; MEDINA, C.L.; MACHADO, E.C.; GOLDMAN, G.H.; MACHADO, M.A. Mapeamento genético de marcadores AFLP ligados a locos de resistência quantitativa de citros à Xylella fastidiosa. In: CONGRESSO NACIONAL DE GENÉTICA, 48., 2002. Águas de Lindóia. Anais...
43. OLIVEIRA, A.C., GARCIA, A.; CRISTOFANI, M.; MACHADO, M.A. Identification of citrus hybrids through the combination of leaf apex morphology and SSR markers. Euphytica, Wageningen, v.128, p.397-403, 2002.
44. Oliveira, A.C.; Machado, M.A. In vitro embryo res-cue of citrus and identification of hybrid morphomet-ric features and molecular markers. In: INTERNA-TIONAL SOCIETY CITRICULTURE CONGRESS, 9., 2000, Orlando. Proceedings... p.172-4.
45. OLIVEIRA, A.C.; VALLIM, M.A.; SEMIGHINI, C.P.; ARAÚJO, W.L.; GOLDMAN, G.H.; MACH-ADO. M.A. Quantification of Xylella fastidiosa from citrus trees by real-time polymerase chain reaction assay. Phytopathology, Saint Paul, v.92, p.1048-54, 2002.
46. OLIVEIRA, A.C.; BASTIANEL, M.; CRISTO-FANI-YALI, M.; AMARAL, A.M.; MACHADO, M.A. Development of genetic maps of the citrus varieties Murcott tangor and Pêra sweet orange by using fluorescent AFLP markers. Journal of Applied and Genetics, Berlin, v.48, p.219-231, 2007.
47. OLIVEIRA, R.P.; CRISTOFANI, M.; MACHADO, M.A. Genetic linkage maps of Pêra sweet orange and Cravo mandarin with RAPD markers. Pesquisa Agropecuária Brasileira, Brasília, v.39, p.159-65, 2004.
48. PALMIERI, D. A.; NOVELLI, V. M.; BASTIANEL, M.; CRISTOFANI, M.; ASTUA-MONGE, G.; CAR-LOS, E.F.; OLIVEIRA, A.C.; MACHADO, M.A. Frequency and distribution of microsatellites from ESTs of citrus. Genetics and Molecular Biology, Ribeirão Preto, v.30, p.1009-1018, 2007.
49. RUIZ, C., PAZ BRETO, M., ASÍNS, M.J. A quick methodology to identify sexual seedlings in citrus breeding programs using SSR markers. Euphytica, Wageningen, v.112, p. 89-94, 2000.
50. SIMONE, M.D.; RUSSO, M.P.; PULEO, G.; MAR-SAN, P.A.; LORENZONI, C.; MAROCCO, A.; RECUPERO, G.R. Construction of genetic maps for Citrus aurantium and C. latipes based on AFLP, RAPD and RFLP markers. Fruits, Paris, v.53, p.383-90, 1998.
51. SIVIERO, A.; CRISTOFANI-YALY, M.; FURTA-DO, E. L; GARCIA, A.A.F.; COELHO, A. S.; MACHADO, M.A. Identification of QTLs associated with citrus resistance to Phytophthora gummosis. Journal of Applied and Genetics, Berlin, v.47, p.23-28, 2006.
52. SIVIERO, A. Avaliação de métodos de inoculação de Phytophthora parasítica e mapeamento de QTLs de resistência em híbridos de Citrus sunki vs. Poncirus trifoliata à gomose. 2001. 117 f. Tese (Doutor)-Faculdade de Ciências Agronômicas, Universidade Estadual Paulista, Botucatu, 2001.
53. SIVIERO, A.; CRISTOFANI, M.; BOAVA; L.; MA-CHADO, M.A. Mapeamento de QTLs associados à produção de frutos e sementes em híbridos de Citrus sunki x Poncirus trifoliata. Revista Brasileira de Fruticultura, Jaboticabal, v.4, p.741-3, 2002.
54. TOZLU, I.; GUY, C.L.; MOORE, G.A. QTL analy-sis of morphological traits in an intergeneric BC1 progeny of Citrus and Poncirus under saline and non-saline environments. Genome, Ottawa, v.42, p.1020-9, 1999a.
55. TOZLU, I.; GUY, C.L.; MOORE, G.A. QTL analy-sis of Na and Cl accumulation related traits in an intergeneric BC1 progeny of Citrus and Poncirus under saline and non-saline environments. Genome, Ottawa, v.42, p.692-705, 1999b.
56. TUSHER, V.G.; TIBSHIRANI, R.; CHU, G. Sig-nificance analysis of microarrays applied to the ionizing radiation response. Proceedings of the National Academy of Sciences of the United States of America, Washington, v.98, p.5116-20, 2001.
57. YANG, Z.N.; YE, X.R.; CHOI, S.; MOLINA, J.; MOONAN, F.; WING, R. A; ROOSE, M.I.; MIRKOV, T.E. Construction of a 1.2 Mb contig including the citrus tristeza virus resistance gene locus using a bacterial artificial chromosome library of Poncirus trifoliata (L.) Raf. Genome, Ottawa, v.44, p.382-93, 2001.