Matrix-assisted laser desorption ionization (MALDI)-time of flight mass spectrometry- and MALDI biotyper-based identification of cultured biphenyl-metabolizing bacteria from contaminated horseradish rhizosphere soil

Applied and Environmental Microbiology

Volumn 77, Issue 19, 2011, Pages 6858-6866

  Uhlik, Ondrej ^a,b   Strejcek, Michal ^a   Junkova, Petra ^a   Sanda, Miloslav ^b   Hroudova, Miluse ^c   Vlcek, Cestmir ^c   Mackova, Martina ^a,b   Macek, Tomas ^a,b  

^a INSTITUTE OF CHEMICAL TECHNOLOGY   (Czech Republic)

^b INSTITUTE OF ORGANIC CHEMISTRY AND BIOCHEMISTRY   (Czech Republic)

^c INSTITUTE OF MOLECULAR GENETICS   (Czech Republic)

Author keywords

[No Author keywords available]

Indexed keywords

16S RRNA GENE; 16S RRNA GENE SEQUENCE; ARTHROBACTER; CONTAMINATED SOILS; FLIGHT MASS SPECTROMETRY; ISOLATED STRAINS; MALDI TOF MS; MATRIX ASSISTED LASER DESORPTION; MATRIX-ASSISTED LASER DESORPTION IONIZATION; REFERENCE SPECTRUM; RHIZOSPHERE SOILS; RHODOCOCCUS; SERRATIA; SOLE SOURCE OF CARBON; TIME OF FLIGHT MASS SPECTROMETRY; WIDE SPECTRUM;

BACTERIA; COPOLYMERIZATION; DESORPTION; GENES; IONIZATION; MASS SPECTROMETRY; ORGANIC POLLUTANTS; POLYCHLORINATED BIPHENYLS; RNA; SOILS;

SOIL POLLUTION;

BACTERIAL DNA; BIPHENYL; BIPHENYL DERIVATIVE; RIBOSOME DNA; RNA 16S;

BACTERIUM; BIOTYPE; DATABASE; DESORPTION; DICOTYLEDON; GENETIC ANALYSIS; IDENTIFICATION METHOD; IONIZATION; MASS SPECTROMETRY; PCB; PROTEIN; RHIZOSPHERE; SOIL POLLUTION;

ARTICLE; BACTERIUM; BACTERIUM IDENTIFICATION; BIODIVERSITY; CHEMISTRY; CLASSIFICATION; CLUSTER ANALYSIS; COMPARATIVE STUDY; DNA SEQUENCE; EVALUATION; GENETICS; HORSERADISH; ISOLATION AND PURIFICATION; MASS SPECTROMETRY; METABOLISM; METHODOLOGY; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; RHIZOSPHERE; SOIL POLLUTANT;

ARMORACIA; BACTERIA; BACTERIAL TYPING TECHNIQUES; BIODIVERSITY; BIPHENYL COMPOUNDS; CLUSTER ANALYSIS; DNA, BACTERIAL; DNA, RIBOSOMAL; MOLECULAR SEQUENCE DATA; RHIZOSPHERE; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SOIL MICROBIOLOGY; SOIL POLLUTANTS; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 82955227959     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.05465-11     Document Type: Article

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