Differential regulation of orthologous chitinase genes in mycoparasitic Trichoderma species

Applied and Environmental Microbiology

Volumn 77, Issue 20, 2011, Pages 7217-7226

  Gruber, Sabine ^a   Kubicek, Christian P ^a   Seidl Seiboth, Verena ^a  

^a VIENNA UNIVERSITY OF TECHNOLOGY   (Austria)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL FUNCTIONS; CARBOHYDRATE BINDING MODULES; CARBON SOURCE; CELL WALLS; CHITINASE GENES; CHITINASES; COLONY FORMATION; DIFFERENTIAL REGULATION; DIVERGENT GENES; EXPRESSION PATTERNS; EXPRESSION PROFILE; EXTERNAL SIGNALS; FUNGAL CELLS; FUNGAL COLONIES; MICROSCOPIC ANALYSIS; NUTRITIONAL STIMULI; ORTHOLOGUES; PLEIOTROPIC ROLES; TRANSCRIPT LEVEL; TRICHODERMA; TRICHODERMA VIRENS;

CARBOHYDRATES; CELLS; DEGRADATION; FUNGI;

GENE EXPRESSION;

CHITINASE;

BIODEGRADATION; CARBOHYDRATE; CARBON; DIVERGENCE; ENZYME ACTIVITY; FUNGUS; GENE EXPRESSION; MICROSCOPY; MYCOPARASITE; PLEIOTROPY; SIGNAL;

ARTICLE; BIOSYNTHESIS; ENZYMOLOGY; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; GENETICS; METABOLISM; SIGNAL TRANSDUCTION; TRICHODERMA;

CHITINASE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, FUNGAL; SIGNAL TRANSDUCTION; TRANSCRIPTION, GENETIC; TRICHODERMA;

EID: 82955206449     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.06027-11     Document Type: Article

References (17)

1. Benítez, T., A. M. Rincon, M. C. Limon, and A. C. Codon. 2004. Biocontrol mechanisms of Trichoderma strains. Int. Microbiol. 7:249-260.
2. Boraston, A. B., D. N. Bolam, H. J. Gilbert, and G. J. Davies. 2004. Carbohydrate-binding modules: fine-tuning polysaccharide recognition. Biochem. J. 382:769-781.
3. Djonović, S., M. J. Pozo, and C. M. Kenerley. 2006. Tvbgn3, a beta-1,6-glucanase from the biocontrol fungus Trichoderma virens, is involved in mycoparasitism and control of Pythium ultimum. Appl. Environ. Microbiol. 72:7661-7670.
4. Foreman, P. K., et al. 2003. Transcriptional regulation of biomass-degrading enzymes in the filamentous fungus Trichoderma reesei. J. Biol. Chem. 278: 31988-31997.
5. Gruber, S., et al. 2011. Analysis of subgroup C of fungal chitinases containing chitin-binding and LysM modules in the mycoparasite Trichoderma atroviride. Glycobiology 21:122-133.
6. Karlsson, M., and J. Stenlid. 2008. Comparative evolutionary histories of the fungal chitinase gene family reveal non-random size expansions and contractions due to adaptive natural selection. Evol. Bioinform. Online 4:47-60.
7. Kubicek, C. P., et al. 2011. Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma. Genome Biol. 12:R40.
8. Palma-Guerrero, J., H. B. Jansson, J. Salinas, and L. V. Lopez-Llorca. 2008. Effect of chitosan on hyphal growth and spore germination of plant pathogenic and biocontrol fungi. J. Appl. Microbiol. 104:541-553.
9. Roncero, C., and A. Duran. 1985. Effect of calcofluor white and Congo red on fungal cell wall morphogenesis: in vivo activation of chitin polymerization. J. Bacteriol. 163:1180-1185.
10. Seidl, V. 2008. Chitinases of filamentous fungi: a large group of diverse proteins with multiple physiological functions. Fungal Biol. Rev. 22:36-42.
11. Seidl, V., B. Huemer, B. Seiboth, and C. P. Kubicek. 2005. A complete survey of Trichoderma chitinases reveals three distinct subgroups of family 18 chitinases. FEBS J. 272:5923-5939.
12. Seidl, V., B. Seiboth, L. Karaffa, and C. P. Kubicek. 2004. The fungal STRE-element-binding protein Seb1 is involved but not essential for glycerol dehydrogenase (gld1) gene expression and glycerol accumulation in Trichoderma atroviride during osmotic stress. Fungal Genet. Biol. 41:1132- 1140.
13. Seo, J., and B. Shneiderman. 2002. Interactively exploring hierarchical clustering results. Computer 35:80-86.
14. Song, W., et al. 2010. R-SNARE homolog MoSec22 is required for conidiogenesis, cell wall integrity, and pathogenesis of Magnaporthe oryzae. PLoS One 5:e13193.
15. Vogel, H. J. 1956. A convenient growth medium for Neurospora (Medium N). Microbiol. Genet. Bull. 13:42-43.
16. Wood, P. J. 1980. Specificity in the interaction of direct dyes with polysaccharides. Carbohydr. Res. 81:271-287.
17. Zhang, S., Y. Xia, and N. O. Keyhani. 2011. Contribution of the gas1 gene of the entomopathogenic fungus Beauveria bassiana, encoding a putative glycosylphosphatidylinositol-anchored beta-1,3-glucanosyltransferase, to conidial thermotolerance and virulence. Appl. Environ. Microbiol. 77:2676-2684.