Peroxisomal Acyl-CoA oxidase 4 activity differs between Arabidopsis accessions

Plant Molecular Biology

Volumn 78, Issue 1-2, 2012, Pages 45-58

  Khan, Bibi Rafeiza ^a   Adham, A Raquel ^b   Zolman, Bethany K ^a  

^a UNIVERSITY OF MISSOURI ST LOUIS   (United States)

^b RICE UNIVERSITY   (United States)

Author keywords

ACX; Acyl CoA oxidase; Fatty acid beta oxidation; Peroxisome

Indexed keywords

ACX1 PROTEIN, ARABIDOPSIS; ACX2 PROTEIN, ARABIDOPSIS; ACX3 PROTEIN, ARABIDOPSIS; ACX4 PROTEIN, ARABIDOPSIS; ACX5 PROTEIN, ARABIDOPSIS; ACYL COENZYME A OXIDASE; ARABIDOPSIS PROTEIN; FATTY ACID; ISOBUTYRIC ACID DERIVATIVE; PROPIONIC ACID DERIVATIVE; SUCROSE;

ARABIDOPSIS; ARTICLE; CLASSIFICATION; DRUG EFFECT; ENZYMOLOGY; GENE EXPRESSION REGULATION; GENETICS; GENOTYPE; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MUTATION; NORTHERN BLOTTING; OXIDATION REDUCTION REACTION; PEROXISOME; PHENOTYPE; PLANT ROOT; SEEDLING; SPECIES DIFFERENCE;

ACYL-COA OXIDASE; ARABIDOPSIS; ARABIDOPSIS PROTEINS; BLOTTING, NORTHERN; FATTY ACIDS; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE EXPRESSION REGULATION, ENZYMOLOGIC; GENE EXPRESSION REGULATION, PLANT; GENOTYPE; ISOBUTYRIC ACIDS; MUTATION; OXIDATION-REDUCTION; PEROXISOMES; PHENOTYPE; PLANT ROOTS; PROPIONATES; SEEDLING; SPECIES SPECIFICITY; SUCROSE;

ARABIDOPSIS;

EID: 82755195785     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11103-011-9843-4     Document Type: Article

References (44)

1. Adham AR, Zolman BK, Millius A, Bartel B (2005) Mutations in Arabidopsis acyl-CoA oxidase genes reveal distinct and overlapping roles in β-oxidation. Plant J 41: 859-874.
2. Arent S, Christensen CE, Pye VE, Nørgaard A, Henriksen A (2010) The multifunctional protein in peroxisomal β-oxidation: structure and substrate specificity of the Arabidopsis thaliana protein MFP2. J Biol Chem 285: 24066-24077.
3. Browse J, McCourt PJ, Somerville CR (1986) Fatty acid composition of leaf lipids determined after combined digestion and fatty acid methyl ester formation from fresh tissue. Anal Biochem 152: 141-145.
4. Cooper TG (1971) The activation of fatty acids in castor bean endosperm. J Biol Chem 246: 3451-3455.
5. Cruz Castillo M, Martinez C, Buchala A, Metraux JP, León J (2004) Gene-specific involvement of β-oxidation in wound-activated responses in Arabidopsis. Plant Physiol 135: 85-94.
6. Dakin HD (1909) The mode of oxidation in the animal organism of phenyl derivatives of fatty acids. Part V. Studies on the fate of phenylvaleric acid and its derivatives. J Biol Chem 6: 221-233.
7. Dave A, Hernández ML, He Z, Andriotis VME, Vaistij FE, Larson TR, Graham IA (2011) 12-oxo-phytodienoic acid accumulation during seed development represses seed germination in Arabidopsis. Plant Cell 23(2): 583-599.
8. Devaiah PS, Pan X, Hong Y, Roth M, Welt R, Wang X (2007) Enhancing seed quality and viability by suppressing phospholipase d in Arabidopsis. Plant J 50: 950-957.
9. Eastmond PJ (2006) SUGAR-DEPENDENT1 encodes a patatin domain triacylglycerol lipase that initiates storage oil breakdown in germinating arabidopsis seeds. Plant Cell 18(3): 665-675. doi: 10. 1105/tpc. 105. 040543.
10. Eastmond PJ, Hooks MA, Graham IA (2000a) The Arabidopsis acyl-CoA oxidase gene family. Biochem Soc Trans 28(6): 755-757.
11. Eastmond PJ, Hooks MA, Williams D, Lange P, Bechtold N, Sarrobert C, Nussaume L, Graham IA (2000b) Promoter trapping of a novel medium-chain acyl-CoA oxidase, which is induced transcriptionally during Arabidopsis seed germination. J Biol Chem 275(44): 34375-34381.
12. Feinberg AP, Vogelstein B (1983) A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Ann Biochem 132: 6-13.
13. Footitt S, Slocombe SP, Larner V, Kurup S, Wu Y, Larson T, Graham I, Baker A, Holdsworth M (2002) Control of germination and lipid mobilization by COMATOSE, the Arabidopsis homologue of human ALDP. EMBO J 21: 2912-2922.
14. Froman BE, Edwards PC, Bursch AG, Dehesh K (2000) ACX3, a novel medium-chain acyl-coenzyme A oxidase from Arabidopsis. Plant Physiol 123(2): 733-741.
15. Gerhardt B (1987) Peroxisomes and fatty acid degradation. Meth Enzymol 148: 516-525.
16. Germain V, Rylott EL, Larson TR, Sherson SM, Bechntold N, Carde J-P, Bryce JH, Graham IA, Smith SM (2001) Requirement for 3-ketoacyl-CoA thiolase-2 in peroxisome development, fatty acid β-oxidation and breakdown of triacylglycerol in lipid bodies of Arabidopsis seedlings. Plant J 28(1): 1-12.
17. Graham IA (2008) Seed storage oil mobilization. Ann Rev Plant Biol 59: 115-142.
18. Haughn GW, Somerville CR (1986) Sulfonylurea-resistant mutants of Arabidopsis thaliana. Mol Gen Genet 204: 430-434.
19. Hayashi H, De Bellis L, Yamaguchi K, Kato A, Hayashi M, Nishimura M (1998a) Molecular characterization of a glyoxysomal long chain acyl-CoA oxidase that is synthesized as a precursor of higher molecular mass in pumpkin. J Biol Chem 273: 8301-8307.
20. Hayashi M, Toriyama K, Kondo M, Nishimura M (1998b) 2, 4-Dichlorophenoxybutyric acid-resistant mutants of Arabidopsis have defects in glyoxysomal fatty acid β-oxidation. Plant Cell 10: 183-195.
21. Hayashi H, De Bellis L, Ciurli A, Kondo M, Hayashi M, Nishimura M (1999) A novel acyl-CoA oxidase that can oxidize short-chain acyl-CoA in plant peroxisomes. J Biol Chem 274: 12715-12721.
22. Hayashi H, Nito K, Takei-Hoshi R, Yagi M, Kondo M, Suenaga A, Yamaya T, Nishimura M (2002) Ped3p is a peroxisomal ATP-binding cassette transporter that might supply substrates for fatty acid β-oxidation. Plant Cell Physiol 43: 1-11.
23. Hooks MA, Kellas F, Graham IA (1999) Long-chain acyl-CoA oxidases of Arabidopsis. Plant J 20(1): 1-13.
24. Hooks M, Turner JE, Murphy EC, Johnston KA, Burr S, Jarosławski S (2007) The Arabidopsis ALDP protein homologue COMATOSE is instrumental in peroxisomal acetate metabolism. Biochem J 406: 399-406.
25. Hryb DJ, Hogg JF (1979) Chain length specificities of peroxisomal and mitochondrial beta-oxidation in rat liver. Biochem Biophys Res Commun 87(4): 1200-1206.
26. Ibdah M, Pichersky E (2009) Arabidopsis Chy1 null mutants are deficient in benzoic acid-containing glucosinolates in the seeds. Plant Biol 11: 574-581.
27. Lange PR, Eastmond PJ, Madagan K, Graham IA (2004) An Arabidopsis mutant disrupted in valine catabolism is also compromised in peroxisomal fatty acid beta-oxidation. FEBS Lett 571(1-3): 147-153.
28. LeClere S, Bartel B (2001) A library of Arabidopsis 35S-cDNA lines for identifying novel mutants. Plant Mol Biol 46: 695-703.
29. Lemieux B, Miquel M, Somerville C, Browse J (1990) Mutants of Arabidopsis with alterations in seed lipid fatty acid composition. Theor Appl Genet 80: 234-240.
30. Lucas KA, Filley JR, Erb JM, Graybill ER, Hawes JW (2007) Peroxisomal metabolism of propionic acid and isobutyric acid in plants. J Biol Chem 282(34): 24980-24989.
31. Pedersen L, Henriksen A (2005) Acyl-CoA oxidase 1 from Arabidopsis thaliana: structure of a key enzyme in plant lipid metabolism. J Mol Biol 345(3): 487-500.
32. Pickett FB, Wilson AK, Estelle M (1990) The aux1 mutation of Arabidopsis confers both auxin and ethylene resistance. Plant Physiol 94: 1462-1466.
33. Pinfield-Wells H, Rylott EL, Gilday AD, Graham S, Job K, Larson TR, Graham IA (2005) Sucrose rescues seedling establishment but not germination of Arabidopsis mutants disrupted in peroxisomal fatty acid catabolism. Plant J 43(6): 861-872.
34. Richmond TA, Bleecker AB (1999) A defect in β-oxidation causes abnormal inflorescence development in Arabidopsis. Plant Cell 11: 1911-1923.
35. Rylott EL, Rogers CA, Gilday AD, Edgell T, Larson TR, Graham IA (2003) Arabidopsis mutants in short- and medium-chain acyl-CoA oxidase activities accumulate acyl-CoAs and reveal that fatty acid β-oxidation is essential for embryo development. J Biol Chem 278(24): 21370-21377.
36. Rylott EL, Eastmond PJ, Gilday AD, Slocombe SP, Larson TR, Baker A, Graham IA (2006) The Arabidopsis thaliana multifunctional protein gene (MFP2) of peroxisomal beta-oxidation is essential for seedling establishment. Plant J 45(6): 930-941. doi: 10. 1111/j. 1365-313X. 2005. 02650. x.
37. Schilmiller AL, Koo AJK, Howe GA (2007) Functional diversification of acyl-coenzyme A oxidases in jasmonic acid biosynthesis and action. Plant Physiol 143(2): 812-824. doi: 10. 1104/pp. 106. 092916.
38. Strader LC, Culler AH, Cohen JD, Bartel B (2010) Conversion of endogenous indole-3-butyric acid to indole-3-acetic acid drives cell expansion in arabidopsis seedlings. Plant Physiol 153(4): 1577-1586. doi: 10. 1104/pp. 110. 157461.
39. Verwoerd TC, Dekker BMM, Hoekema A (1989) A small-scale procedure for the rapid isolation of plant RNAs. Nucleic Acids Res 17: 2362.
40. Wasternack C, Kombrink E (2010) Jasmonates: structural requirements for lipid-derived signals active in plant stress responses and development. ACS Chem Biol 5: 63-77.
41. Winter D, Vinegar B, Nahal H, Ammar R, Wilson GV, Provart NJ (2007) An "electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets. PLoS One 2(1): e718.
42. Zolman BK, Yoder A, Bartel B (2000) Genetic analysis of indole-3-butyric acid responses in Arabidopsis thaliana reveals four mutant classes. Genetics 156: 1323-1337.
43. Zolman BK, Monroe-Augustus M, Thompson B, Hawes JW, Krukenberg KA, Matsuda SPT, Bartel B (2001a) chy1, an Arabidopsis mutant with impaired β-oxidation, is defective in a peroxisomal β-hydroxyisobutyryl-CoA hydrolase. J Biol Chem 276: 31037-31046.
44. Zolman BKS, Silva ID, Bartel B (2001b) The Arabidopsis pxa1 mutant is defective in an ATP-binding cassette transporter-like protein required for peroxisomal fatty acid β-oxidation. Plant Physiol 127: 1266-1278.