A transcriptomic analysis reveals the nature of salinity tolerance of a wheat introgression line

Plant Molecular Biology

Volumn 78, Issue 1-2, 2012, Pages 159-169

  Liu, Chun ^a   Li, Shuo ^a   Wang, Mengcheng ^a   Xia, Guangmin ^a  

^a SHANDONG UNIVERSITY   (China)

Author keywords

Introgression; Iso osmotic; ROS; Salt tolerance; Transcriptome; Wheat

Indexed keywords

MACROGOL DERIVATIVE; PROTEOME; SODIUM CHLORIDE; TRANSCRIPTOME; VEGETABLE PROTEIN;

ADAPTATION; ARTICLE; CLUSTER ANALYSIS; DNA MICROARRAY; DRUG EFFECT; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE LIBRARY; GENETICS; HALOPHYTE; HETEROSIS; HYBRIDIZATION; METABOLISM; POACEAE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SALINITY; SALT TOLERANCE; TIME; WHEAT;

ADAPTATION, PHYSIOLOGICAL; CLUSTER ANALYSIS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; GENE LIBRARY; HYBRID VIGOR; HYBRIDIZATION, GENETIC; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PLANT PROTEINS; POACEAE; POLYETHYLENE GLYCOLS; PROTEOME; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SALINITY; SALT-TOLERANCE; SALT-TOLERANT PLANTS; SODIUM CHLORIDE; TIME FACTORS; TRANSCRIPTOME; TRITICUM;

LOPHOPYRUM ELONGATUM; THINOPYRUM PONTICUM; TRITICUM AESTIVUM;

EID: 82755194802     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11103-011-9854-1     Document Type: Article

References (40)

1. Aprile A, Mastrangelo AM, De Leonardis AM, Galiba G, Roncaglia E, Ferrari F, De Bellis L, Turchi L, Giuliano G, Cattivelli L (2009) Transcriptional profiling in response to terminal drought stress reveals differential responses along the wheat genome. BMC Genomics 10: 279.
2. Askari H, Edqvist J, Hajheidari M, Kafi M, Salekdeh GH (2006) Effects of salinity levels on proteome of Suaeda aegyptiaca leaves. Proteomics 6: 2542-2554.
3. Bartels D, Sunkar R (2005) Drought and salt tolerance in plants. Crit Rev Plant Sci 24: 23-58.
4. Chen SY, Xia GM (2003) Heredity of chloroplast and nuclear genomes of asymmetric somatic hybrid lines between wheat and couch grass. ACTA Bot Sin 46(1): 110-115.
5. Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M (2005) Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21: 3674-3676.
6. Deyholos MK (2010) Making the most of drought and salinity transcriptomics. Plant Cell Environ 33: 648-654.
7. Fujibe T, Saji H, Watahiki MK, Yamamoto KT (2006) Overexpression of the RADICAL-INDUCED CELL DEATH1 (RCD1) gene of Arabidopsis causes weak rcd1 phenotype with compromised oxidative-stress responses. Biosci Biotechnol Biochem 70: 1827-1831.
8. Gao X, Liu SW, Sun Q, Xia GM (2010) High frequency of HMW-GS sequence variation through somatic hybridization between Agropyron elongatum and common wheat. Planta 231: 245-250.
9. Hirayama T, Shinozaki K (2010) Research on plant abiotic stress responses in the post-genome era: past, present and future. Plant J 61: 1041-1052.
10. Huang W, Ma X, Wang Q, Gao Y, Xue Y, Niu X, Yu G, Liu Y (2008) Significant improvement of stress tolerance in tobacco plants by overexpressing a stress-responsive aldehyde dehydrogenase gene from maize (Zea mays). Plant Mol Biol 68: 451-463.
11. Ishitani M, Liu J, Halfter U, Kim C-S, Shi W, Zhu J-K (2000) SOS3 function in plant salt tolerance requires N-myristoylation and calcium binding. Plant Cell 12: 1667-1677.
12. Kang JY, Choi HI, Im MY, Kim SY (2002) Arabidopsis basic leucine zipper proteins that mediate stress-responsive abscisic acid signaling. Plant Cell 14: 343-357.
13. + antiporter SOS1 interacts with RCD1 and functions in oxidative stress tolerance in Arabidopsis. Proc Natl Acad Sci USA 103: 18816-18821.
14. Kotchoni SO, Kuhns C, Ditzer A, Kirch HH, Bartels D (2006) Over-expression of different aldehyde dehydrogenase genes in Arabidopsis thaliana confers tolerance to abiotic stress and protects plants against lipid peroxidation and oxidative stress. Plant Cell Environ 29: 1033-1048.
15. Li C, Lv J, Zhao X, Ai X, Zhu X, Wang M, Zhao S, Xia G (2010) TaCHP: a wheat zinc finger protein gene down-regulated by abscisic acid and salinity stress plays a positive role in stress tolerance. Plant Physiol 154: 211-221.
16. Liu SW, Zhao SY, Chen FG, Xia GM (2007) Generation of novel high quality HMW-GS genes in two introgression lines of Triticum aestivum/Agropyron elongatum. MBC Evol Biol 7: 76-83.
17. Mittler R (2002) Oxidative stress, antioxidants and stress tolerance. Trends Plant Sci 7: 405-410.
18. Mohammadi M, Kav NNV, Deyholos MK (2007) Transcriptional profiling of hexaploid wheat (Triticum aestivum L.) roots identifies novel, dehydration-responsive genes. Plant Cell Environ 30(5): 630-645.
19. Munnik T, Meijer HJ (2001) Osmotic stress activates distinct lipid and MAPK signaling pathways in plants. FEBS Lett 498: 172-178.
20. Munns R, Tester M (2008) Mechanisms of salinity tolerance. Annu Rev Plant Biol 59: 651-681.
21. Nankivell BJ, Chen J, Boadle RA, Harris DC (1994) The role of tubular iron accumulation in the remnant kidney. J Am Soc Nephrol 4: 1598-1607.
22. 2+ and phosphorylation. J Biol Chem 283: 8885-8892.
23. Overmyer K, Tuominen H, Kettunen R, Betz C, Langebartels C, Sandermann H Jr, Kangasjärvi J (2000) Ozone-sensitive Arabidopsisrcd1 mutant reveals opposite roles for ethylene and jasmonate signaling pathways in regulating superoxide-dependent cell death. Plant Cell 12: 1849-1862.
24. Peng Z, Wang M, Li F, Lv H, Li C, Xia G (2009) A proteomic study of the response to salinity and drought stress in an introgression strain of bread wheat. Mol Cell Proteomics 8: 2676-2686.
25. Sakamo T, Murata N (2002) Regulation of the desaturation of fatty acids and its role in tolerance to cold and salt stress. Curr Opin Microbiol 5: 206-210.
26. Saldanha AJ (2004) Java Treeview-extensible visualization of microarray data. Bioinformatics 20: 3246-3248.
27. Shan L, Zhao SY, Chen F, Xia GM (2006) Screening and localization of SSR markers related to salt tolerance of somatic hybrid wheat Shanrong No. 3. Sci Agric Sin 39: 225-230.
28. Sharma YK, Davis KR (1995) Isolation of a novel Arabidopsis ozone-induced cDNA by differential display. Plant Mol Biol 29: 91-98.
29. Shetty K, Wahlqvist ML (2004) A model for the role of the proline-linked pentose-phosphate pathway in phenolic phytochemical bio-synthesis and mechanism of action for human health and environmental applications. Asia Pac J Clin Nutr 13: 1-24.
30. Smyth GK, Yang YH, Speed T (2003) Statistical issues in cDNA microarray data analysis. Methods Mol Biol 224: 111-136.
31. Treutter D (2006) Significance of flavonoids in plant resistance: a review. Environ Chem Lett 4: 147-157.
32. van Baarlen P, van Esse HP, Siezen RJ, Thomma BPHJ (2008) Challenges in plant cellular pathway reconstruction based on gene expression profiling. Trends Plant Sci 13: 44-50.
33. Walia H, Wilson C, Wahid A, Condamine P, Cui X, Close TJ (2006) Expression analysis of barley (Hordeum vulgare L.) during salinity stress. Funct Integr Genomics 6: 143-156.
34. Walia H, Wilson C, Condamine P, Ismail AM, Xu J, Cui X, Close TJ (2007) Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise. BMC Genomics 8: 87-100.
35. Wang J, Xiang FN, Xia GM (2005) Agropyron elongatum chromatin localization on the wheat chromosomes in an introgression line. Planta 221: 277-286.
36. Wang MC, Peng ZY, Li CL, Li F, Liu C, Xia GM (2008) Proteomic analysis on a high salt tolerance introgression strain of Triticum aestivum/Thinopyrum ponticum. Proteomics 8: 1470-1489.
37. Wu J, Mao X, Cai T, Luo J, Wei L (2006) KOBAS server: a web-based platform for automated annotation and pathway identification. Nucleic Acids Res 34: W720-W724.
38. Xia GM, Xiang FN, Zhou AF, Wang H, Chen HM (2003) Asymmetric somatic hybridization between wheat (Triticum aestivum L.) and Agropyron elongatum (Host) Nevishi. Theor Appl Genet 107: 299-305.
39. 2+ and anion currents in Arabidopsis suspension cells. Plant Physiol 141: 1555-1562.
40. Zhu J (2002) Salt and drought stress signal transduction in plants. Annu Rev Plant Biol 53: 247-273.