Identification of Salmonella enterica species- and subgroup-specific genomic regions using Panseq 2.0

Infection, Genetics and Evolution

Volumn 11, Issue 8, 2011, Pages 2151-2161

  Laing, Chad ^a,b   Villegas, Andre ^a   Taboada, Eduardo N ^a   Kropinski, Andrew ^a   Thomas, James E ^b   Gannon, Victor P J ^a  

^a PUBLIC HEALTH AGENCY OF CANADA   (Canada)

^b UNIVERSITY OF LETHBRIDGE   (Canada)

Author keywords

Evolution; Genomics; Pan genome; Panseq; Salmonella; Software

Indexed keywords

ARTICLE; BACTERIAL GENOME; BACTERIUM IDENTIFICATION; CONTROLLED STUDY; DATA ANALYSIS SOFTWARE; GASTROENTERITIS; GENE LOCUS; GENOME ANALYSIS; GENOME SIZE; MULTILOCUS SEQUENCE TYPING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PRIORITY JOURNAL; SALMONELLA ENTERICA; SEQUENCE ALIGNMENT; SEROTYPE; SINGLE NUCLEOTIDE POLYMORPHISM; SPECIES DIFFERENCE; TYPHOID FEVER;

BACTERIAL TYPING TECHNIQUES; DNA, BACTERIAL; GENOME, BACTERIAL; HUMANS; PHYLOGENY; POLYMORPHISM, SINGLE NUCLEOTIDE; SALMONELLA ENTERICA; SEQUENCE ANALYSIS, DNA;

SALMONELLA; SALMONELLA ENTERICA;

EID: 82655184191     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2011.09.021     Document Type: Article

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