Unsupervised segmentation of brain tissues using multiphase level sets on multiple MRI sequences

Proceedings of the 2nd IASTED International Conference on Computational Bioscience, CompBio 2011

Volumn , Issue , 2011, Pages 385-391

  Veronese, Elisa ^a   Poletti, Enea ^a   Calabrese, Massimiliano ^a   Bertoldo, Alessand ^a   Grisan, Enrico ^a  

^a UNIVERSITY OF PADOVA   (Italy)

Author keywords

MRI segmentation; Multiphase level set

Indexed keywords

ACTIVE CONTOUR MODEL; AUTOMATED SEGMENTATION; AUTOMATIC EVALUATION; BIAS FIELD INHOMOGENEITY; BRAIN TISSUE; CEREBRO SPINAL FLUIDS; GRAY MATTER; HIGH RESOLUTION; LEVEL SET; LEVEL SET FRAMEWORK; MAGNETIC RESONANCE IMAGES; MR IMAGES; MR SEQUENCE; MRI SEGMENTATION; MRI SEQUENCES; MULTI-MODAL; PARTIAL VOLUME EFFECT; PIECEWISE CONSTANT; TISSUE CLASSIFICATION; UNSUPERVISED SEGMENTATION; VECTOR-VALUED FUNCTION; WHITE MATTER;

BRAIN; HISTOLOGY; MAGNETIC RESONANCE; MAGNETIC RESONANCE IMAGING; NEURODEGENERATIVE DISEASES; TISSUE;

IMAGE SEGMENTATION;

EID: 82655183003     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.2316/P.2011.742-034     Document Type: Conference Paper

References (15)

1. T. F. Chan and L. A. Vese, "Active contours without edges." IEEE transactions on image processing : a publication of the IEEE Signal Processing Society, vol. 10, no. 2, pp. 266-77, Jan. 2001. (Pubitemid 32254596)
2. A. Venneri, "Imaging treatment effects in Alzheimer's disease." Magnetic resonance imaging, vol. 25, no. 6, pp. 953-68, Jul. 2007. (Pubitemid 47081351)
3. M. Bozzali, M. Cercignani, and C. Caltagirone, "Brain volumetrics to investigate aging and the principal forms of degenerative cognitive decline: a brief review." Magnetic resonance imaging, vol. 26, no. 7, pp. 1065-70, Sep. 2008.
4. S. Huber, G. Paulson, D. Chakeres, A. Pakalnis, M. Brogan, B. Phillips, M. Myers, and K. Rammohan, "Magnetic resonance imaging and clinical correlations in multiple sclerosis," Journal of the Neurological Sciences, vol. 86, no. 1, pp. 1-12, 1988.
5. Y. Ge, R. I. Grossman, J. K. Udupa, J. S. Babb, L. G. Nyúl, and D. L. Kolson, "Brain atrophy in relapsing-remitting multiple sclerosis: fractional volumetric analysis of graymatter and whitematter." Radiology, vol. 220, no. 3, pp. 606-10, Sep. 2001. (Pubitemid 32799964)
6. J. T. Chen, S. Narayanan, D. L. Collins, S. M. Smith, P. M. Matthews, and D. L. Arnold, "Relating neocortical pathology to disability progression in multiple sclerosis using MRI." NeuroImage, vol. 23, no. 3, pp. 1168-75, Nov. 2004. (Pubitemid 39446548)
7. K. Nakamura and E. Fisher, "Segmentation of brain magnetic resonance images for measurement of gray matter atrophy in multiple sclerosis patients." NeuroImage, vol. 44, no. 3, pp. 769-76, Feb. 2009.
8. B. R. Sajja, S. Datta, R. He, M. Mehta, R. K. Gupta, J. S. Wolinsky, and P. a. Narayana, "Unified approach for multiple sclerosis lesion segmentation on brain MRI." Annals of biomedical engineering, vol. 34, no. 1, pp. 142-51, Jan. 2006.
9. J. Ashburner and K. J. Friston, "Unified segmentation." NeuroImage, vol. 26, no. 3, pp. 839-51, Jul. 2005. (Pubitemid 40825026)
10. S. M. Smith, M. Jenkinson, M. W. Woolrich, C. F. Beckmann, T. E. J. Behrens, H. Johansen-Berg, P. R. Bannister, M. De Luca, I. Drobnjak, D. E. Flitney, R. K. Niazy, J. Saunders, J. Vickers, Y. Zhang, N. De Stefano, J. M. Brady, and P.M. Matthews, "Advances in functional and structural MR image analysis and implementation as FSL." NeuroImage, vol. 23 Suppl 1, pp. S208-19, Jan. 2004. (Pubitemid 39421720)
11. R. Gelineau-Kattner, V. Tomassini, M. Jemkinson, and J. Palace, "The effect of white matter lesions on segmentation of deep grey matter structures," in Proceedings of the 16th annual meeting of the Organization for the Human Brain Mapping HBM2010, 2010, p. 153.
12. D. Mumford and J. Shah, "Optimal approximation by piecewise smooth functions and associated variational problems," Communications on Pure and Applied Mathematics, vol. 42, pp. 577-685, 1989.
13. S. Osher and J. Sethian, "Fronts propagating with curvature-dependent speed: algorithm based on Hamilton-Jacobi formulation," Journal of Computational Physics, vol. 42, pp. 12-49, 1988.
14. L. A. Vese and T. F. Chan, "A Multiphase Level Set Framework for Image Segmentation Using the Mumford and Shah Model ," The International Journal of Computer Vision, vol. 50, no. 3, pp. 271-293, 2002. (Pubitemid 35377416)
15. E. Veronese, E. Grisan, A. Favaretto, M. Calabrese, P. Gallo, and A. Bertoldo, "Automatic segmentation of gray matter multiple sclerosis lesions on dir images," in Proceedings of the 16th annual meeting of the Organization for the Human Brain Mapping HBM2010, 2010, p. 153.