Detection and quantification of poliovirus infection using FTIR spectroscopy and cell culture

Journal of Biological Engineering

Volumn 5, Issue , 2011, Pages

  Lee Montiel, Felipe T ^a   Reynolds, Kelly A ^b   Riley, Mark R ^a  

^a University of Arizona   (United States)

^b UNIVERSITY OF ARIZONA   (United States)

Author keywords

Buffalo green monkey kidney (bgmk) cells; Cell culture; Enterovirus; Fourier transform infrared (ftir) spectroscopy; Mid infrared; Partial least squares; Poliovirus (pv1); Virus detection; Zinc selenide (znse)

Indexed keywords

VINCULIN;

ACTIN FILAMENT; ANIMAL CELL; ARTICLE; BIOSENSOR; CELL CULTURE; CELL NUCLEUS; IN VITRO STUDY; INFRARED SPECTROSCOPY; KIDNEY CELL; NONHUMAN; POLIOMYELITIS; POLIOMYELITIS VIRUS; PRIORITY JOURNAL; VIRUS PARTICLE;

CERCOPITHECUS AETHIOPS; ENTEROVIRUS; POLIOVIRUS;

EID: 82655170559     PISSN: None     EISSN: 17541611     Source Type: Journal    
DOI: 10.1186/1754-1611-5-16     Document Type: Article

References (55)

1. Jones KE, Patel NG, Levy MA, Storeygard A, Balk D, Gittleman JL, Daszak P. Global trends in emerging infectious diseases. Nature 2008, 451:990-993. 10.1038/nature06536, 18288193.
2. Pruss-Ustun A, Bos R, Gore F, Bartram J. Safe water, better health: costs, benefits and sustainability of interventions to protect and promote health. World Health Organization, Geneva 2008,
3. Reynolds K, Gerba C, Pepper I. Detection of infectious enteroviruses by an integrated cell culture-PCR procedure. Appl Environ Microbiol 1996, 62:1424-1427. 167909, 8919804.
4. Schiff GM, Stefanovic GM, Young B, Pennekamp JK. Minimum human infectious dose of enteric viruses (echovirus-12) in drinking water. Enteric viruses in water 1984, 15:222-228. Melnick JL.
5. Non-polio enterovirus infections, Division of viral Diseases Centers for Disease Control and Prevention. last access Nov 2011., http://www.cdc.gov/ncidod/dvrd/revb/enterovirus/non-polio_entero.htm
6. Koopmans M, Duizer E. Foodborne viruses: an emerging problem. International Journal of Food Microbiology 2004, 90:23-41. 10.1016/S0168-1605(03)00169-7, 14672828.
7. Gerba CP, Gramos DM, Nwachuku N. Comparative Inactivation of Enteroviruses and Adenovirus 2 by UV Light. Appl Environ Microbiol 2002, 68:5167-5169. 10.1128/AEM.68.10.5167-5169.2002, 126408, 12324370.
8. Karttunen T, Pöyry T, Vaarala O, Ilonen J, Hovi T, Roivainen M, Hyypiä T. Variation in enterovirus receptor genes. Journal of Medical Virology 2003, 70:99-108. 10.1002/jmv.10352, 12629650.
9. Wimmer E, Cu T, Cao X. Genetics of poliovirus. Palo Alto, CA, ETATS-UNIS: Annual Reviews 1993,
10. Gerba CP. Applied and Theoretical Aspects of Virus Adsorption to Surfaces. Advances in Applied Microbiology 1984, 30:133-168. Academic Press, Allen IL.
11. Rey M, Girard MP. The global eradication of poliomyelitis: Progress and problems. Comparative Immunology, Microbiology and Infectious Diseases 2008, 31:317-325. 10.1016/j.cimid.2007.07.013, 17923156.
12. Mantsch HH, Chapman D. Infrared spectroscopy of biomolecules. 1996, New York: Wiley-Liss.
13. Reynolds KA, Gerba CP, M A, IL P. ICC/PCR detection of enteroviruses and hepatitis A virus in environmental samples. Canadian Journal of Microbiology 2001, 47:153-157. 10.1139/w00-134, 11261495.
14. Nijhuis M, van Maarseveen N, Schuurman R, Verkuijlen S, de Vos M, Hendriksen K, van Loon AM. Rapid and Sensitive Routine Detection of All Members of the Genus Enterovirus in Different Clinical Specimens by Real-Time PCR. J Clin Microbiol 2002, 40:3666-3670. 10.1128/JCM.40.10.3666-3670.2002, 130891, 12354863.
15. Metcalf GT, Melnick LJ, Estes KM. Environmental virology: from detection of virus in sewage and water by isolation to identification by molecular biology: a trip of over 50 years. 1995, Palo Alto, CA, ETATS-UNIS: Annual Reviews.
16. Fields BN, Knipe DM, Howley PM. Fields virology 1996, Lippincott-Raven Publishers, Philadelphia, PA, 3.
17. Sano D, Matsuo, Takahiro, Omura, Tatsuo. Virus-binding proteins recovered from bacterial culture derived from activated sludge by affinity chromatography assay using a viral capsid peptide. 2004, Washington, DC, ETATS-UNIS: American Society for Microbiology.
18. Sedmak G, Bina D, MacDonald J, Couillard L. Nine-Year Study of the Occurrence of Culturable Viruses in Source Water for Two Drinking Water Treatment Plants and the Influent and Effluent of a Wastewater Treatment Plant in Milwaukee, Wisconsin (August 1994 through July 2003). Applied and Environmental Microbiology 2005, 71:1042-1050. 10.1128/AEM.71.2.1042-1050.2005, 546740, 15691964.
19. Gerba CP, Rose JB, Singh SN, Farrah SR. Waterborne gastroenteritis and viral hepatitis. Critical Reviews in Environmental Control 1985, 15:213-236.
20. AWWA Waterborne Pathogens. AWWA Manual of Water Practices M48, American Water Works Association, Denver, CO 1999, AWWA.
21. Scipioni A, Daube G, Thiry E. Contamination of food and water by human pathogenic viruses. Annales de Medecine Veterinaire 2000, 144:207-221.
22. Pina S, Buti M, Jardí R, Clemente-Casares P, Jofre J, Girones R. Genetic analysis of hepatitis A virus strains recovered from the environment and from patients with acute hepatitis. Journal of General Virology 2001, 82:2955-2963.
23. Dorner SM, Anderson WB, Gaulin T, Candon HL, Slawson RM, Payment P, Huck PM. Pathogen and indicator variability in a heavily impacted watershed 2007, London, ROYAUME-UNI: IWA Publishing.
24. US EPA, (2006a) 40 CFR Parts 9, 141 and 142. National Primary Drinking Water Regulations: Ground Water Rule. Final rule Fed Regist 2006, 71(216):65573-65660. US EPA, (2006a).
25. Erukhimovitch V, Talyshinsky M, Souprun Y, Huleihel M. FTIR Microscopy Detection of Cells Infected With Viruses. DNA Viruses 2005, 292:161-172.
26. Jackson M, Kim K, Tetteh J, Mansfield JR, Dolenko B, Somorjai RL, Orr FW, Watson PH, Mantsch HH. Cancer diagnosis by infrared spectroscopy: methodological aspects. San Jose, CA, USA 1998, 24-34. SPIE, Mantsch HH, Jackson M.
27. Vargas CA, Wilhelm AA, Williams J, Lucas P, Reynolds KA, Riley MR. Integrated Capture and Spectroscopic Detection of Viruses. Appl Environ Microbiol 2009, 75:6431-6440. 10.1128/AEM.02036-08, 2765139, 19700543.
28. Riley MR, Lucas P, Le Coq D, Juncker C, Boesewetter DE, Collier JL, DeRosa DM, Katterman ME, Boussard-Plédel C, Bureau B. Lung cell fiber evanescent wave spectroscopic biosensing of inhalation health hazards. Biotechnology and Bioengineering 2006, 95:599-612. 10.1002/bit.21152, 16900468.
29. Lucas P, Le Coq D, Juncker C, Collier J, Boesewetter DE, Boussard-Plédel C, Bureau B, Riley MR. Evaluation of Toxic Agent Effects on Lung Cells by Fiber Evanescent Wave Spectroscopy. Appl Spectrosc 2005, 59:1-9. 10.1366/0003702052940387, 15720730.
30. Wilhelm AA, Lucas P, Reynolds K, Riley MR. Integrated capture and spectroscopic detection of viruses in an aqueous environment. San Jose, CA, USA 2008, 68520K-68528. SPIE, Gannot I.
31. Erukhimovitch V, Mukmanov I, Talyshinsky M, Souprun Y, Huleihel M. The use of FTIR microscopy for evaluation of herpes viruses infection development kinetics. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 2004, 60:2355-2361.
32. Argov S, Ramesh J, Salman A, Sinelnikov I, Goldstein J, Guterman H, Mordechai S. Diagnostic potential of Fourier-transform infrared microspectroscopy and advanced computational methods in colon cancer patients. Journal of Biomedical Optics 2002, 7:248-254. 10.1117/1.1463051, 11966311.
33. Dukor KR, Liebman NM, Johnson LB. A New, Non-Destructive Method For Analysis of Clinical Samples with FT-IR Microspectroscopy. Breast Cancer Tissue As An Example. 1998, Noisy-Le-Grand, Royaume-Uni: Cellular And Molecular Biology.
34. Wang HP, Wang HC, Huang YJ. Microscopic FTIR studies of lung cancer cells in pleural fluid. Science of The Total Environment 1997, 204:283-287. 10.1016/S0048-9697(97)00180-0, 9335161.
35. Choo LP, Mansfield JR, Pizzi N, Somorjai RL, Jackson M, Halliday WC, Mantsch HH. Infrared spectra of human central nervous system tissue: Diagnosis of alzheimer's disease by multivariate analyses. Biospectroscopy 1995, 1:141-148.
36. Shaw AR, Kotowich S, Mantsch HH, Leroux M. Quantitation Of Protein, Creatinine, And Urea In Urine By Near-Infrared Spectroscopy. 1996, Amsterdam, Pays-Bas: Elsevier.
37. Stenger DA, Gross GW, Keefer EW, Shaffer KM, Andreadis JD, Ma W, Pancrazio JJ. Detection of physiologically active compounds using cell-based biosensors. Trends in Biotechnology 2001, 19:304-309. 10.1016/S0167-7799(01)01690-0, 11451472.
38. Banerjee P, Bhunia AK. Mammalian cell-based biosensors for pathogens and toxins. Trends in Biotechnology 2009, 27:179-188. 10.1016/j.tibtech.2008.11.006, 19187988.
39. Sakudo A, Suganuma Y, Kobayashi T, Onodera T, Ikuta K. Near-infrared spectroscopy: Promising diagnostic tool for viral infections. Biochemical and Biophysical Research Communications 2006, 341:279-284. 10.1016/j.bbrc.2005.12.153, 16414011.
40. Hastings G, Krug P, Wang R, Guo J, Lamichhane HP, Tang T, Hsu Y-S, Ward J, Katz D, Hilliard J. Viral infection of cells in culture detected using infrared microscopy. Analyst 2009, 134:1462-1471. 10.1039/b902154j, 19562216.
41. Cantera JL, Chen W, Yates MV. A simple, rapid and sensitive flow cytometry method to detect infective poliovirus based on fluorescence resonance energy transfer (FRET) technology. Appl Environ Microbiol 2009, AEM.01851-01809.
42. Pancrazio JJ, Whelan JP, Borkholder DA, Ma W, Stenger DA. Development and Application of Cell-Based Biosensors. Annals of Biomedical Engineering 1999, 27:697-711.
43. Haes AJ, Van Duyne RP. A Nanoscale Optical Biosensor: Sensitivity and Selectivity of an Approach Based on the Localized Surface Plasmon Resonance Spectroscopy of Triangular Silver Nanoparticles. Journal of the American Chemical Society 2002, 124:10596-10604. 10.1021/ja020393x, 12197762.
44. Koch F, Koch G. The molecular biology of poliovirus 1985, Wien: Springer-Verlag.
45. Movasaghi Z, Rehman S, ur Rehman DI. Fourier Transform Infrared (FTIR) Spectroscopy of Biological Tissues. Applied Spectroscopy Reviews 2008, 43:134-179.
46. Yano K, Ohoshima S, Gotou Y, Kumaido K, Moriguchi T, Katayama H. Direct Measurement of Human Lung Cancerous and Noncancerous Tissues by Fourier Transform Infrared Microscopy: Can an Infrared Microscope Be Used as a Clinical Tool?. Analytical Biochemistry 2000, 287:218-225. 10.1006/abio.2000.4872, 11112267.
47. Takahashi S, Satomi A, Yano K, Kawase H, Tanimizu T, Tuji Y, Murakami S, Hirayama R. Estimation of glycogen levels in human colorectal cancer tissue: relationship with cell cycle and tumor outgrowth. Journal of Gastroenterology 1999, 34:474-480. 10.1007/s005350050299, 10452680.
48. Graves IL. Effects of poliovirus and of guanidine on the metabolism of glycogen in HeLa cells. Journal of Virology 1967, 1(5):1098-1099. 375394, 4316235.
49. Romeo M, Mohlenhoff B, Diem M. Infrared micro-spectroscopy of human cells: Causes for the spectral variance of oral mucosa (buccal) cells. Vibrational Spectroscopy 2006, 42:9-14. 10.1016/j.vibspec.2006.04.009, 2742430, 19750140.
50. Mohlenhoff B, Romeo M, Diem M, Wood BR. Mie-Type Scattering and Non-Beer-Lambert Absorption Behavior of Human Cells in Infrared Microspectroscopy. Biophysical Journal 2005, 88:3635-3640. 10.1529/biophysj.104.057950, 1305510, 15749767.
51. Cantera JL, Chen W, Yates MV. Detection of Infective Poliovirus by a Simple, Rapid, and Sensitive Flow Cytometry Method Based on Fluorescence Resonance Energy Transfer Technology. Appl Environ Microbiol 2010, 76:584-588. 10.1128/AEM.01851-09, 2805220, 19933336.
52. Hwang Y-C, Chen W, Yates MV. Use of Fluorescence Resonance Energy Transfer for Rapid Detection of Enteroviral Infection In Vivo. Appl Environ Microbiol 2006, 72:3710-3715. 10.1128/AEM.72.5.3710-3715.2006, 1472337, 16672521.
53. Huang YT, Yam P, Yan H, Sun Y. Engineered BGMK Cells for Sensitive and Rapid Detection of Enteroviruses. J Clin Microbiol 2002, 40:366-371. 10.1128/JCM.40.2.366-371.2002, 153414, 11825943.
54. Liebmann B, Filzmoser P, Varmuza K. Robust and classical PLS regression compared. Journal of Chemometrics 2010, 24:111-120.
55. Abdi H. Partial least squares regression and projection on latent structure regression (PLS Regression). Wiley Interdisciplinary Reviews: Computational Statistics 2010, 2:97-106.