Two-phase olive mill waste composting: Community dynamics and functional role of the resident microbiota

Bioresource Technology

Volumn 102, Issue 23, 2011, Pages 10965-10972

  Federici, Ermanno ^a   Pepi, Milva ^b   Esposito, Alessandro ^c   Scargetta, Silvia ^a   Fidati, Laura ^a   Gasperini, Simone ^b   Cenci, Giovanni ^a   Altieri, Roberto ^c  

^a UNIVERSITY OF PERUGIA   (Italy)

^b UNIVERSITY OF SIENA   (Italy)

^c CNR   (Italy)

Author keywords

Bacterial diversity; Composting; DGGE; Olive mill waste; Tannase

Indexed keywords

16S RRNA GENE; BACTERIAL DIVERSITY; BACTERIAL POPULATION; CELL NUMBER; COMMUNITY DYNAMICS; COMPOSTING PROCESS; DENATURING GRADIENT GEL ELECTROPHORESIS; DGGE; ENZYMATIC ACTIVITIES; HIGH QUALITY; HUMIFICATION; LOW LOSS; MICROBIOTAS; OLIVE MILL WASTE; PHYSICO-CHEMICALS; POLYPHENOLS; RHODOCOCCUS RHODOCHROUS; TANNASE; THERMOPHILIC PHASE; TWO-PHASE EXTRACTION; TWO-PHASE OLIVE MILL WASTE; VARIABLE COMMUNITIES; VIABLE CELLS;

BIODIVERSITY; CHEMICAL MODIFICATION; COMPOSTING; DEGRADATION; DYNAMICS; ELECTROPHORESIS; GENES; PHENOLS; RNA;

WASTE TREATMENT;

CARBON; NITROGEN; ORGANIC MATTER; POLYPHENOL DERIVATIVE; RNA 16S; TANNIN;

BACTERIUM; BIODEGRADATION; BIODIVERSITY; BIOTRANSFORMATION; CARBON; COMMUNITY DYNAMICS; COMPOST; COMPOSTING; ELECTROKINESIS; ENZYME ACTIVITY; EVERGREEN TREE; GEL; GENETIC ANALYSIS; HUMIFICATION; MICROBIAL ACTIVITY; MILL; MINERALIZATION; NITROGEN; ORGANIC MATTER; PHENOL; PHYSICOCHEMICAL PROPERTY; WASTE;

ARTICLE; BACILLACEAE; BACTERIUM ISOLATION; BIODIVERSITY; BIOTRANSFORMATION; CELL COUNT; COMMUNITY DYNAMICS; COMPOST; COMPOSTING; CONTROLLED STUDY; DEGRADATION; DENATURING GRADIENT GEL ELECTROPHORESIS; ENZYME ACTIVITY; EXTRACTION; FIRMICUTES; HUMIFICATION; KOCURIA PALUSTRIS; LYSINIBACILLUS FUSIFORMIS; MICROFLORA; MINERALIZATION; NONHUMAN; NUCLEOTIDE SEQUENCE; OLIVE; PHYSICAL CHEMISTRY; PRIORITY JOURNAL; RHODOCOCCUS RHODOCHROUS; TETRATHIOBACTER KASHMIRENSIS;

BACTERIA; BIODEGRADATION, ENVIRONMENTAL; BIODIVERSITY; BIOTRANSFORMATION; CHEMISTRY, PHYSICAL; DNA; ELECTROPHORESIS, AGAR GEL; HYDROGEN-ION CONCENTRATION; INDUSTRIAL WASTE; METAGENOME; OLEA; ORGANIC CHEMICALS; PHENOLS; PHYLOGENY; POLYMERASE CHAIN REACTION; REFUSE DISPOSAL; RNA, RIBOSOMAL, 16S; SOIL; TANNINS;

BACTERIA (MICROORGANISMS); KOCURIA PALUSTRIS; RHODOCOCCUS RHODOCHROUS; TETRATHIOBACTER KASHMIRENSIS;

EID: 82455209047     PISSN: 09608524     EISSN: 18732976     Source Type: Journal    
DOI: 10.1016/j.biortech.2011.09.062     Document Type: Article

References (34)

1. Altieri R., Esposito A. Olive orchard amended with two experimental olive mill wastes mixtures: effects on soil organic carbon, plant growth and yield. Bioresour. Technol. 2008, 99:8390-8393.
2. Altieri R., Esposito A. Evaluation of the fertilizing effect of olive mill waste compost in short-term crops. Int. Biodeter. Biodegr. 2010, 64:124-128.
3. Baeta-Hall L., Céu Sàágua M., Lourdes Bartolomeu M., Anselmo A.M., Fernanda Rosa M. Bio-degradation of olive oil husks in composting aerated piles. Bioresour. Technol. 2005, 96:69-78.
4. Belur P.D., Gopal M., Nirmala K.R., Basavaraj N. Production of novel cell-associated tannase from newly isolated Serratia ficaria DTC. J. Microbiol. Biotechnol. 2010, 20:732-736.
5. Belur P.D., Mugeraya G. Microbial production of tannase: state of the art. Res. J. Microbiol. 2011, 6:25-40.
6. Bernal M.P., Alburquerque J.A., Moral R. Composting of animal manures and chemical criteria for compost maturity assessment. A review. Bioresour. Technol. 2009, 100:5444-5453.
7. Bhat T.K., Singh B., Sharma O.P. Microbial degradation of tannins. A current perspective. Biodegradation 1998, 9:343-357.
8. Cayuela M.L., Sanchez-Monedero M.A., Roig A. Evaluation of two different aeration systems for composting two-phase olive mill wastes. Process Biochem. 2006, 41:616-623.
9. Chowdhury S.P., Khanna S., Verma S.C., Tripathi A.K. Molecular diversity of tannic acid degrading bacteria isolated from tannery soil. J. Appl. Microbiol. 2004, 97:1210-1219.
10. Cole J.R., Wang Q., Cardenas E., Fish J., Chai B., Farris R.J., Kulam-Syed-Mohideen A.S., McGarrell D.M., Marsh T.G., Garrity M., Tiedje J.M. The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res. 2009, 37:D141-D145.
11. Federici E., Leonardi V., Giubilei M.A., Quaratino D., Spaccapelo R., D'Annibale A., Petruccioli M. Addition of allochthonous fungi to a historically contaminated soil affects both remediation efficiency and bacterial diversity. Appl. Microbiol. Biotechnol. 2007, 77:203-211.
12. Federici F., Fava F., Kalogerakis N., Mantzavinos D. Valorisation of agro-industrial by-products, effluents and wastes: concept, opportunities and the case of olive oil sector. J. Chem. Technol. Biotechnol. 2009, 84:895-900.
13. Hachicha S., Cegarra J., Sellami F., Hachicha R., Drira N., Medhioub K., Ammar E. Elimination of polyphenols toxicity from olive mill wastewater sludge by its co-composting with sesame bark. J. Hazard. Mater. 2009, 161:1131-1139.
14. Hachicha S., Sellami F., Cegarra J., Hachicha R., Drira N., Medhioub K., Ammar E. Biological activity during co-composting of sludge issued from the OMW evaporation ponds with poultry manure. Physico-chemical characterization of the processed organic matter. J. Hazard. Mater. 2009, 162:402-409.
15. Kirk J.L., Beaudette L.A., Hart M., Moutoglis P., Klironomos J.N., Lee H., Trevors J.T. Methods of studying soil microbial diversity. J. Microbiol. Meth. 2004, 58:169-188.
16. Kistner T., Nitz G., Schnitzler W.H. Phytotoxic effects of some compounds of olive mill wastewater (OMW). Fres. Environ. Bull. 2004, 13:1360-1361.
17. Kulcu R., Yaldiz O. Determination of aeration rate and kinetics of composting some agricultural wastes. Bioresour. Technol. 2004, 93:49-57.
18. Miller F.C. Composting as a process based on the control of ecologically selective factors. Soil Microbial Ecology, Applications in Agricultural and Environmental Management 1992, 515-544. Marcel Dekker, Inc., New York. F.B. Metting (Ed.).
19. Mondal K.C., Banerjee R., Pati B.R. Tannase production by Bacillus licheniformis. Biotechnol. Lett. 2000, 22:767-769.
20. Mondal K.C., Banerjee D., Banerjee R., Pati B.R. Production and characterization of tannase from Bacillus cereus KBR9. J. Gen. Appl. Microbiol. 2001, 47:263-267.
21. Mupondi L.T., Mnkeni P.N.S., Brutsch M.O. The effect of goat manure, sewage sludge and effective microorganisms on the composting of pine bark and the nutritional value of compost. Compost. Sci. Util. 2006, 14:201-210.
22. Muyzer G., de Waal E.C., Uitterlinden A.G. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 1993, 59:695-700.
23. Noguchi N., Ohashi T., Shiratori T., Narui K., Hagiwara T., Ko M., Watanabe K., Miyahara T., Taira S., Moriyasu F., Sasatsu M. Association of tannase-producing Staphylococcus lugdunensis with colon cancer and characterization of a novel tannase gene. J. Gastroenterol. 2007, 42:346-351.
24. Novinscak A., DeCoste N.J., Surette C., Filion M. Characterization of bacterial and fungal communities in composted biosolids over a 2 year period using denaturing gradient gel electrophoresis. Can. J. Microbiol. 2009, 55:375-387.
25. Osawa R., Kuroiso K., Goto S., Shimizu A. Isolation of tannin degrading Lactobacilli from humans and fermented foods. Appl. Environ. Microbiol. 2000, 66:3093-3097.
26. Pepi M., Lampariello L.R., Altieri R., Esposito A., Perra G., Renzi M., Lobianco A., Feola A., Gasperini S., Focardi S.E. Tannic acid degradation by bacterial strains Serratia spp. and Pantoea sp. isolated from olive mill waste mixtures. Int. Biodeter. Biodegr. 2010, 64:73-80.
27. Roig A., Cayuela M.L., Sánchez-Monedero M.A. An overview on olive mill wastes and their valorisation methods. Waste Manage. 2006, 26:960-969.
28. Ryckeboer J., Mergaert J., Vaes K., Klammer S., De Clercq D., Coosemans J., Insam H., Swings J. A survey of bacteria and fungi occurring during composting and self-heating processes. Ann. Microbiol. 2003, 53:349-410.
29. Said-Pullicino D., Erriquens F.G., Gigliotti G. Changes in the chemical characteristics of water-extractable organic matter during composting and their influence on compost stability and maturity. Bioresour. Technol. 2007, 98:1822-1831.
30. Takaku H., Kodaira S., Kimoto A., Nashimoto M., Takagi M. Microbial communities in the garbage composting with rice hull as an amendment revealed by culture-dependent and -independent approaches. J. Biosci. Bioeng. 2006, 101:42-50.
31. Tuomela M., Vikman A., Hatakka M., Itavaara M. Biodegradation of lignin in a compost environment: a review. Bioresour. Technol. 2000, 72:169-183.
32. Vaquero I., Marcobal A., Muñoz R. Tannase activity by lactic acid bacteria isolated from grape must and wine. Int. J. Food Microbiol. 2004, 96:199-204.
33. Vivas A., Moreno B., Garcia-Rodriguez S., Benitez E. Assessing the impact of composting and vermicomposting on bacterial community size and structure, and microbial functional diversity of an olive-mill waste. Bioresour. Technol. 2009, 100:1319-1326.
34. Zhang J., Zeng G., Chen Y., Yu M., Yu Z., Li H., Yu Y., Huang H. Effects of physico-chemical parameters on the bacterial and fungal communities during agricultural waste composting. Bioresour. Technol. 2010, 102:2950-2956.