Susceptibility of rice to sheath blight: An assessment of the diversity of rice germplasm according to genetic groups and morphological traits

Euphytica

Volumn 183, Issue 2, 2012, Pages 227-241

  Willocquet, L ^a   Noel, M ^a   Sackville Hamilton, R ^a   Savary, S ^a  

^a INTERNATIONAL RICE RESEARCH INSTITUTE   (Philippines)

Author keywords

Germplasm; Oryza sativa; Rhizoctonia solani; Rice; Sheath blight; Susceptibility

Indexed keywords

HYPHOMYCETES; JAPONICA; ORYZA SATIVA; THANATEPHORUS CUCUMERIS;

EID: 82355161064     PISSN: 00142336     EISSN: 15735060     Source Type: Journal    
DOI: 10.1007/s10681-011-0451-9     Document Type: Article

References (37)

1. Agresti A (2002) Categorial data analysis, 2nd edn. Wiley, Hoboken.
2. Benzécri JP (1973) L'Analyse des Données. Tome 2. L'Analyse des Correspondances. Dunod, Paris.
3. Bioversity International, IRRI and WARDA (2007) Descriptors for wild and cultivated rice (Oryza spp.).
4. Butt DJ, Royle DJ (1980) The importance of terms and definitions for a conceptually unified epidemiology. In: Palti J, Kranz J (eds) Comparative epidemiology. A tool for better disease management. Pudoc, Wageningen, pp 29-45.
5. Castilla NP, Leano RM, Elazegui FA, Teng PS, Savary S (1996) Effects of plant contact, inoculation pattern, leaf wetness regime, and nitrogen supply on inoculum efficiency in rice sheath blight. J Phytopathol 144: 187-192.
6. Dagnelie P (1975) Analyse statistique a plusieurs variables. Les presses agronomiques de Gembloux. Gembloux, Belgique.
7. Fisher L, van Ness JW (1971) Admissible clustering procedures. Biometrika 58: 91-104.
8. Garris AJ, Tai TH, Coburn J, Kresovich S, McCouch S (2005) Genetic structure and diversity in Oryza sativa L. Genetics 169: 1631-1638.
9. Glaszmann JC (1987) Isozymes and classification of Asian rice varieties. Theor Appl Genet 74: 21-30.
10. Gomez KA, Gomez AA (1975) Statistical procedures for agricultural research, 2nd edn. Wiley, New York.
11. Greenacre MJ (1984) Theory and applications of correspondence analysis. Academic Press, London.
12. Harrell FE Jr (2001) Regression modeling strategies: with applications to models, logistic regression, and survival analysis. Springer-Verlag, New-York.
13. IRGCIS (2010) http://www. irgcis. irri. org: 81/grc/irgcishome. html. Accessed 8 July 2010.
14. IRRI, IBPGR (1980) Descriptors for rice Oryza sativa L. IRRI, Los Baños, p 21.
15. Lebart L, Morineau A, Fénelon JP (1982) Traitement des Données Statistiques. Méthodes et Programmes. Dunod, Paris.
16. McNally KL, Manzano R, Macatangay M, Redondo M, Lacorte V, Zaidem M, Detras J, Barile M, Angeles R, Quilloy S, Gamalinda M, Sancinagco M, Pabale D, Sackville Hamilton NR, Benoit L, Rivallan R, Courtois B, Billot C, Garavito A, Lorieux M, Martinez CP, Borba T, Brondani RV, Brondani C, Cissoko M, Ndjiondjop MN, Famoso A, McCouch SR (2007) Population structure of the rice composite set. Generation challenge programme annual research meeting, September 2007, Benoni, Poster Abstracts, p. 25. http://www. generationcp. org/UserFiles/File/Abstracts. pdf.
17. Mew TW (1991) Disease management in rice. In: CRC handbook of pest management in agriculture, 2nd edn, vol III. CRC Press, Inc. Boca Raton, Ann Arbor, pp 279-299.
18. Ou SH (1985) Rice diseases, 2nd edn. Commonwealth Mycological Institute, Surrey.
19. Parlevliet JE, van Ommeren A (1975) Partial resistance of barley to leaf rust: Puccinia hordei. II. Relationship between field trials microplot tests and latent period. Euphytica 24: 293-303.
20. Pinson SRM, Capdevielle FM, Oard JH (2005) Confirming QTLs and finding additional loci conditioning sheath blight resistance in rice using recombinant inbred lines. Crop Sci 45: 503-510.
21. Poland JA, Balint-Kurti PJ, Wisser RJ, Pratt RC, Nelson RJ (2009) Shades of gray: the world of quantitative disease resistance. Trends Plant Sci 14: 21-29.
22. Robinson RA (1976) Plant pathosystems. Springer, Berlin.
23. Sackville Hamilton NR, Skøt L, Chorlton KH, Thomas ID, Mizen S (2002) Molecular genecology of temperature response in Lolium perenne: preliminary analysis to reduce false positives. Mol Ecol 11: 1855-1863.
24. Savary S, Mew TW (1996) Analyzing crop losses due to Rhizoctonia solani: rice sheath blight, a case study. In: Sneh B, Jabaji-Hare S, Neate S, Dijst G (eds) Rhizoctonia species taxonomy, molecular biology, ecology, pathology and disease control. Kluwer Academic Publishers, Dordrecht, pp 237-245.
25. Savary S, Bosc JP, Noirot M, Zadoks JC (1988) Peanut rust in West Africa: a new component in a multiple pathosystem. Plant Dis 72: 1001-1009.
26. Savary S, Castilla NP, Elazegui FA, McLaren CG, Ynalvez MA, Teng PS (1995) Direct and indirect effects of nitrogen supply and disease source structure on rice sheath blight spread. Phytopathology 85: 959-965.
27. Savary S, Elazegui FA, Teng PS (1996) A survey portfolio for the characterization of rice pest constraints. IRRI Discussion Papers Series no. 18. IRRI, Los Baños.
28. Savary S, Willocquet L, Elazegui FA, Castilla N, Teng PS (2000) Rice pest constraints in tropical Asia: quantification and yield loss due to rice pests in a range of production situations. Plant Dis 84: 357-369.
29. Sharma NR, Teng PS (1990) Effect of inoculum source on sheath blight development. Int Rice Res Newsl 15: 20-21.
30. Shrestha CL, Oña I, Muthukrishnan S, Mew TW (2008) Chitinase levels in rice cultivars correlate with resistance to the sheath blight pathogen Rhizoctonia solani. Eur J Plant Pathol 120: 69-77.
31. Srinivasachary, Willocquet L, Savary S (2011) Resistance to rice sheath blight (Rhizoctonia solani Kühn) [(teleomorph: Thanatephorus cucumeris (A. B. Frank) Donk.] disease: current status and perspectives. Euphytica 178: 1-22.
32. Teng PS, Torres CQ, Nuque FL, Calvero SB (1990) Current knowledge on crop losses in tropical rice. In: Crop loss assessment in rice, IRRI, Philippines, pp 39-54.
33. van der Plank JE (1978) Genetic and molecular basis of plant pathogenesis. Springer, Berlin.
34. Wilkinson L, Engelman L, Corter J, Coward M (2007) Cluster analysis. In: Statistics I. SYSTAT Software, Inc. San Jose, pp I-65-I-124.
35. Yang XB, Snow JP, Berggen GT (1991) Patterns of Rhizoctonia foliar blight on soybean and effect of aggregation on disease development. Phytopathology 81: 287-293.
36. Zadoks JC, Schein RD (1979) Epidemiology and plant disease management. Oxford University Press, New York.
37. Zuo S, Zhang L, Wang H, Yin Y, Zhang Y, Chen Z, Ma Y, Pan X (2008) Prospect of the QTL-qSB-9Tq utilized in molecular breeding program of japonica rice against sheath blight. J Genet Genomics 35: 499-505.