Structural insights into the homology and differences between mouse protein tyrosine phosphatase-sigma and human protein tyrosine phosphatase-sigma

Acta Biochimica et Biophysica Sinica

Volumn 43, Issue 12, 2011, Pages 977-988

  Hou, Li ^a   Wang, Jianchuan ^b   Zhou, Yueyang ^c   Li, Jingya ^c   Zang, Yi ^c   Li, Jia ^a,c  

^a EAST CHINA NORMAL UNIVERSITY   (China)

^b INSTITUTE OF BIOCHEMISTRY AND CELL BIOLOGY   (China)

^c SHANGHAI INSTITUTE OF MATERIA MEDICA   (China)

Author keywords

Crystallization; Difference; Homology; Mouse PTP sigma

Indexed keywords

3 METHOXYFLUORESCEIN PHOSPHATE; 3-O-METHYLFLUORESCEIN PHOSPHATE; FLUORESCEIN DERIVATIVE; NITROPHENOL; NITROPHENYL PHOSPHATE; ORGANOPHOSPHORUS COMPOUND; RECEPTOR LIKE PROTEIN TYROSINE PHOSPHATASE;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; CHEMISTRY; COMPARATIVE STUDY; CRYSTALLIZATION; ENZYME SPECIFICITY; GENETICS; HUMAN; METABOLISM; METHODOLOGY; MOLECULAR GENETICS; MOUSE; PROTEIN TERTIARY STRUCTURE; SEQUENCE HOMOLOGY; SPECIES DIFFERENCE;

AMINO ACID SEQUENCE; ANIMALS; CRYSTALLIZATION; FLUORESCEINS; HUMANS; MICE; MOLECULAR SEQUENCE DATA; NITROPHENOLS; ORGANOPHOSPHORUS COMPOUNDS; PROTEIN STRUCTURE, TERTIARY; RECEPTOR-LIKE PROTEIN TYROSINE PHOSPHATASES, CLASS 2; SEQUENCE HOMOLOGY, AMINO ACID; SPECIES SPECIFICITY; SUBSTRATE SPECIFICITY;

EID: 82255194166     PISSN: 16729145     EISSN: 17457270     Source Type: Journal    
DOI: 10.1093/abbs/gmr095     Document Type: Article

References (27)

1. Fischer EH, Charbonneau H, Cool DE and Tonks NK. Tyrosine phosphatases and their possible interplay with tyrosine kinases. Ciba Found Symp 1992, 164: 132-144.
2. Kotelevets L, van Hengel J, Bruyneel E, Mareel M, van Roy F and Chastre E. The lipid phosphatase activity of PTEN is critical for stabilizing intercellular junctions and reverting invasiveness. J Cell Biol 2001, 155: 1129-1135. (Pubitemid 34286264)
3. Knillova J, Kolar Z and Hlobilkova A. The significance of key regulators of apoptosis in the development and prognosis of prostate carcinoma. II. Products of suppressor genes Rb and PTEN, CDKI, Fas. Biomed Pap Med Fac Univ Palacky Olomouc Czech Repub 2003, 147: 11-17.
4. Den Hertog J and Hunter T. Tight association of GRB2 with receptor protein tyrosine phosphatase alpha is mediated by the SH2 and C terminal SH3 domains. EMBO J 1996, 15: 3016-3027.
5. Asante Appiah E and Kennedy BP. Protein tyrosine phosphatases: the quest for negative regulators of insulin action. Am J Physiol Endocrinol Metab 2003, 284: E663-E670. (Pubitemid 36323858)
6. Zhu Z, Oh SY, Cho YS, Zhang L, Kim YK and Zheng T. Tyrosine phosphatase SHP-1 in allergic and anaphylactic inflammation. Immunol Res 2010, 47: 3-13.
7. Chagnon MJ, Uetani N and Tremblay ML. Functional significance of the LAR receptor protein tyrosine phosphatase family in development and diseases. Biochem Cell Biol 2004, 82: 664-675. (Pubitemid 40486145)
8. Tautz L, Pellecchia M and Mustelin T. Targeting the PTPome in human disease. Expert Opin Ther Targets 2006, 10: 157-177. (Pubitemid 43263273)
9. Alonso A, Sasin J, Bottini N, Friedberg I, Osterman A, Godzik A and Hunter T, et al. Protein tyrosine phosphatases in the human genome. Cell 2004, 117: 699-711. (Pubitemid 38748887)
10. Andersen JN, Mortensen OH, Peters GH, Drake PG, Iversen LF, Olsen OH and Jansen PG, et al. Structural and evolutionary relationships among protein tyrosine phosphatase domains. Mol Cell Biol 2001, 21: 7117-7136. (Pubitemid 32953467)
11. Almo SC, Bonanno JB, Sauder JM, Emtage S, Dilorenzo TP, Malashkevich V and Wasserman SR, et al. Structural genomics of protein phosphatases. J Struct Funct Genomics 2007, 8: 121-140. (Pubitemid 50007113)
12. Johnson KG and Van Vactor D. Receptor protein tyrosine phosphatases in nervous system development. Physiol Rev 2003, 83: 1-24. (Pubitemid 36459876)
13. Aricescu AR, McKinnell IW, Halfter W and Stoker AW. Heparan sulfate proteoglycans are ligands for receptor protein tyrosine phosphatase sigma. Mol Cell Biol 2002, 6: 1881-1892. (Pubitemid 34175003)
14. Fox AN and Zinn K. The heparan sulfate proteoglycan syndecan is an in vivo ligand for the Drosophila LAR receptor tyrosine phosphatase. Curr Biol 2005, 15: 1701-1711. (Pubitemid 41415626)
15. Johnson KG, Tenney AP, Ghose A, Duckworth AM, Higashi ME, Parfitt K and Marcu O, et al. The HSPGs Syndecan and Dallylike bind the receptor phosphatase LAR and exert distinct effects on synaptic development. Neuron 2006, 49: 517-531. (Pubitemid 43221888)
16. Siu R, Fladd C and Rotin D. N-cadherin is an in vivo substrate for protein tyrosine phosphatase sigma (PTPsigma) and participates in PTPsigmamediated inhibition of axon growth. Mol Cell Biol 2007, 27: 208-219. (Pubitemid 46013245)
17. Thompson KM, Uetani N, Manitt C, Elchebly M, Tremblay ML and Kennedy TE. Receptor protein tyrosine phosphatase sigma inhibits axonal regeneration and the rate of axon extension. Mol Cell Neurosci 2003, 23: 681-692. (Pubitemid 36970228)
18. Sapieha PS, Duplan L, Uetani N, Joly S, Tremblay ML, Kennedy TE and Di Polo A. Receptor protein tyrosine phosphatase sigma inhibits axon regrowth in the adult injured CNS. Mol Cell Neurosci 2005, 28: 625-635. (Pubitemid 40387878)
19. Shen Y, Tenney AP, Busch SA, Horn KP, Cuascut FX, Liu K and He Z, et al. PTPsigma is a receptor for chondroitin sulfate proteoglycan, an inhibitor of neural regeneration. Science 2009, 326: 592-596.
20. Otwinowski Z and Minor W. Processing of X-ray diffraction data collected in oscillation mode. Method Enzymol 1997, 276: 307-326. (Pubitemid 27085611)
21. Brunger AT, Adams PD, Clore GM, DeLano WL, Gros P, Grosse-Kunstleve RW and Jiang JS, et al. Crystallography & NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr D Biol Crystallogr 1998, 54: 905-921.
22. Brunger AT. Version 1.2 of the crystallography and NMR system. Nat Protoc 2007, 2: 2728-2733.
23. Emsley P and Cowtan K. Coot: model-building tools for molecular graphics. Acta Crystallogr D Biol Crystallogr 2004, 60: 2126-2132. (Pubitemid 41742764)
24. Nam HJ, Poy F, Krueger NX, Saito H and Frederick CA. Crystal structure of the tandem phosphatase domains of RPTP LAR. Cell 1999, 97: 449-457. (Pubitemid 29231168)
25. Barr AJ, Ugochukwu E, Lee WH, King ON, Filippakopoulos P, Alfano I and Savitsky P, et al. Large-scale structural analysis of the classical human protein tyrosine phosphatome. Cell 2009, 136: 352-363.
26. Nam HJ, Poy F, Saito H and Frederick CA. Structural basis for the function and regulation of the receptor protein tyrosine phosphatase CD45. J Exp Med 2005, 201: 441-452. (Pubitemid 40229418)
27. Lee S, Faux C, Nixon J, Alete D, Chilton J, Hawadle M and Stoker AW. Dimerization of protein tyrosine phosphatase sigma governs both ligand binding and isoform specificity. Mol Cell Biol 2007, 27: 1795-1808.