Flyexpress: Visual mining of spatiotemporal patterns for genes and publications in drosophila embryogenesis

Bioinformatics

Volumn 27, Issue 23, 2011, Pages 3319-3320

  Kumar, Sudhir ^a,e   Konikoff, Charlotte ^a,b   Van emden, Bernard ^a   Busick, Christopher ^a   Davis, Kailah T ^a   Ji, Shuiwang ^a,c   Wu, Lin Wei ^a   Ramos, Hector ^a   Brody, Thomas ^d   Panchanathan, Sethuraman ^c   Ye, Jieping ^a,c   Karr, Timothy L ^a   Gerold, Kristyn ^a   Mccutchan, Michael ^a   Newfeld, Stuart J ^a,e  

^a ARIZONA STATE UNIVERSITY   (United States)

^b Department of Biology ^*  (United States)

^c ARIZONA STATE UNIVERSITY   (United States)

^d NATIONAL INSTITUTES OF HEALTH   (United States)

^e ARIZONA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DROSOPHILA MELANOGASTER;

DROSOPHILA PROTEIN;

ANIMAL; ARTICLE; AUDIOVISUAL EQUIPMENT; DATA MINING; DROSOPHILA MELANOGASTER; EMBRYO DEVELOPMENT; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; PRENATAL DEVELOPMENT;

ANIMALS; AUDIOVISUAL AIDS; DATA MINING; DROSOPHILA MELANOGASTER; DROSOPHILA PROTEINS; EMBRYONIC DEVELOPMENT; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, DEVELOPMENTAL;

EID: 82255181421     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btr567     Document Type: Article

References (4)

1. Konikoff, C. et al. (2011) Comparison of embryonic expression within multigene families employing the FlyExpress discovery platform reveals significantly more spatial than temporal divergence. Developmental Dynamics [Epub ahead of print, doi: 10.1002/dvdy.22749, September 29, 2011].
2. Kumar, S. et al. (2002) BEST. A novel computational approach for comparing gene expression patterns from early stages of Drosophila melanogaster development. Genetics, 162, 2037-2047.
3. Lécuyer, E. et al. (2007) Global analysis of mRNAlocalization reveals a prominent role in organizing cellular architecture and function, Cell, 131, 174-187.
4. Tomancak, P. et al. (2002) Systematic determination of patterns of gene expression during Drosophila embryogenesis. Genome Biol., 3, RESEARCH0088.