-
1
-
-
31544452808
-
The path forward for biofuels and biomaterials
-
DOI 10.1126/science.1114736
-
A.J. Ragauskas, C.K. Williams, B.H. Davison, G. Britovsek, J. Cairney, C.A. Eckert, W.J. Frederick Jr., J.P. Hallett, D.J. Leak, C.L. Liotta, J.R. Mielenz, R. Murphy, R. Templer, and T. Tschaplinski The path forward for biofuels and biomaterials Science 311 2006 484 489 (Pubitemid 43158454)
-
(2006)
Science
, vol.311
, Issue.5760
, pp. 484-489
-
-
Ragauskas, A.J.1
Williams, C.K.2
Davison, B.H.3
Britovsek, G.4
Cairney, J.5
Eckert, C.A.6
Frederick Jr., W.J.7
Hallett, J.P.8
Leak, D.J.9
Liotta, C.L.10
Mielenz, J.R.11
Murphy, R.12
Templer, R.13
Tschaplinski, T.14
-
2
-
-
14944356813
-
Cellulase, clostridia, and ethanol
-
DOI 10.1128/MMBR.69.1.124-154.2005
-
A.L. Demain, M. Newcomb, and J.H. Wu Cellulase, clostridia, and ethanol Microbiol. Mol. Biol. Rev. 69 2005 124 154 (Pubitemid 40360711)
-
(2005)
Microbiology and Molecular Biology Reviews
, vol.69
, Issue.1
, pp. 124-154
-
-
Demain, A.L.1
Newcomb, M.2
Wu, J.H.D.3
-
4
-
-
66749150169
-
Enzymatic deconstruction of xylan for biofuel production
-
D. Dodd, and I.K. Cann Enzymatic deconstruction of xylan for biofuel production Glob. Change Biol. Bioenergy 1 2009 2 17
-
(2009)
Glob. Change Biol. Bioenergy
, vol.1
, pp. 2-17
-
-
Dodd, D.1
Cann, I.K.2
-
5
-
-
77951630910
-
Thermostable enzymes as biocatalysts in the biofuel industry
-
C.J. Yeoman, Y. Han, D. Dodd, C.M. Schroeder, R.I. Mackie, and I.K. Cann Thermostable enzymes as biocatalysts in the biofuel industry Adv. Appl. Microbiol. 70 2010 1 55
-
(2010)
Adv. Appl. Microbiol.
, vol.70
, pp. 1-55
-
-
Yeoman, C.J.1
Han, Y.2
Dodd, D.3
Schroeder, C.M.4
MacKie, R.I.5
Cann, I.K.6
-
6
-
-
58149200943
-
The Carbohydrate-Active EnZymes database (CAZy): An expert resource for glycogenomics
-
B.L. Cantarel, P.M. Coutinho, C. Rancurel, T. Bernard, V. Lombard, and B. Henrissat The Carbohydrate-Active EnZymes database (CAZy): an expert resource for glycogenomics Nucleic Acids Res. 37 2009 D233 D238
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Cantarel, B.L.1
Coutinho, P.M.2
Rancurel, C.3
Bernard, T.4
Lombard, V.5
Henrissat, B.6
-
7
-
-
77951228328
-
Substrate specificity of family 5, 6, 7, 9, 12, and 45 endoglucanases
-
E. Vlasenko, M. Schulein, J. Cherry, and F. Xu Substrate specificity of family 5, 6, 7, 9, 12, and 45 endoglucanases Bioresour. Technol. 101 2010 2405 2411
-
(2010)
Bioresour. Technol.
, vol.101
, pp. 2405-2411
-
-
Vlasenko, E.1
Schulein, M.2
Cherry, J.3
Xu, F.4
-
8
-
-
0029166485
-
Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases
-
B. Henrissat, I. Callebaut, S. Fabrega, P. Lehn, J.P. Mornon, and G. Davies Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases Proc. Natl. Acad. Sci. U.S.A. 92 1995 7090 7094
-
(1995)
Proc. Natl. Acad. Sci. U.S.A.
, vol.92
, pp. 7090-7094
-
-
Henrissat, B.1
Callebaut, I.2
Fabrega, S.3
Lehn, P.4
Mornon, J.P.5
Davies, G.6
-
9
-
-
34548249734
-
Endoglucanase sensitivity for substituents in methyl cellulose hydrolysis studied using MALDI-TOFMS for oligosaccharide analysis and structural analysis of enzyme active sites
-
DOI 10.1021/bm0701200
-
U. Schagerlof, H. Schagerlof, D. Momcilovic, G. Brinkmalm, and F. Tjerneld Endoglucanase sensitivity for substituents in methyl cellulose hydrolysis studied using MALDI-TOFMS for oligosaccharide analysis and structural analysis of enzyme active sites Biomacromolecules 8 2007 2358 2365 (Pubitemid 47316974)
-
(2007)
Biomacromolecules
, vol.8
, Issue.8
, pp. 2358-2365
-
-
Schagerlof, U.1
Schagerlof, H.2
Momcilovic, D.3
Brinkmalm, G.4
Tjerneld, F.5
-
10
-
-
67651211619
-
Understanding how diverse beta-mannanases recognize heterogeneous substrates
-
L.E. Tailford, V.M. Ducros, J.E. Flint, S.M. Roberts, C. Morland, D.L. Zechel, N. Smith, M.E. Bjornvad, T.V. Borchert, K.S. Wilson, G.J. Davies, and H.J. Gilbert Understanding how diverse beta-mannanases recognize heterogeneous substrates Biochemistry 48 2009 7009 7018
-
(2009)
Biochemistry
, vol.48
, pp. 7009-7018
-
-
Tailford, L.E.1
Ducros, V.M.2
Flint, J.E.3
Roberts, S.M.4
Morland, C.5
Zechel, D.L.6
Smith, N.7
Bjornvad, M.E.8
Borchert, T.V.9
Wilson, K.S.10
Davies, G.J.11
Gilbert, H.J.12
-
11
-
-
0022522022
-
Thermotoga maritima sp. nov. represents a new genus of unique extremely thermophilic eubacteria growing up to 90°C
-
R. Huber, T.A. Langworthy, H. Konig, M. Thomm, C.R. Woese, U.B. Sleytr, and K.O. Stetter Thermotoga maritima sp. nov. represents a new genus of unique extremely thermophilic eubacteria growing up to 90 °C Arch. Microbiol. 144 1986 324 333 (Pubitemid 16074944)
-
(1986)
Archives of Microbiology
, vol.144
, Issue.4
, pp. 324-333
-
-
Huber, R.1
Langworthy, T.A.2
Konig, H.3
-
12
-
-
0037470149
-
Carbohydrate-induced differential gene expression patterns in the hyperthermophilic bacterium Thermotoga maritima
-
DOI 10.1074/jbc.M211748200
-
S.R. Chhabra, K.R. Shockley, S.B. Conners, K.L. Scott, R.D. Wolfinger, and R.M. Kelly Carbohydrate-induced differential gene expression patterns in the hyperthermophilic bacterium Thermotoga maritima J. Biol. Chem. 278 2003 7540 7552 (Pubitemid 36800761)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.9
, pp. 7540-7552
-
-
Chhabra, S.R.1
Shockley, K.R.2
Conners, S.B.3
Scott, K.L.4
Wolfinger, R.D.5
Kelly, R.M.6
-
13
-
-
0034047876
-
Mechanism of substrate hydrolysis by a thermophilic endoglucanase from Thermotoga maritima
-
DOI 10.1023/A:1005656203233
-
B.R. Evans, A.K. Gilman, K. Cordray, and J. Woodward Mechanism of substrate hydrolysis by a thermophilic endoglucanase from Thermotoga maritima Biotechnol. Lett. 22 2000 735 740 (Pubitemid 30407613)
-
(2000)
Biotechnology Letters
, vol.22
, Issue.9
, pp. 735-740
-
-
Evans, B.R.1
Gilman, A.K.2
Cordray, K.3
Woodward, J.4
-
14
-
-
34548286979
-
Characterization of an Endo-β-1.4-glucanase of Thermotoga maritima expressed in Escherichia coli
-
M. Rahman, S.H. Bhuiyan, S. Nirasawa, M. Kitaoka, and K. Hayashi Characterization of an Endo-β-1.4-glucanase of Thermotoga maritima expressed in Escherichia coli J. Appl. Glycosci. 49 2002 487 495
-
(2002)
J. Appl. Glycosci.
, vol.49
, pp. 487-495
-
-
Rahman, M.1
Bhuiyan, S.H.2
Nirasawa, S.3
Kitaoka, M.4
Hayashi, K.5
-
15
-
-
0036154307
-
Regulation of endo-acting glycosyl hydrolases in the hyperthermophilic bacterium Thermotoga maritima grown on glucan- and mannan-based polysaccharides
-
DOI 10.1128/AEM.68.2.545-554.2002
-
S.R. Chhabra, K.R. Shockley, D.E. Ward, and R.M. Kelly Regulation of endo-acting glycosyl hydrolases in the hyperthermophilic bacterium Thermotoga maritima grown on glucan- and mannan-based polysaccharides Appl. Environ. Microbiol. 68 2002 545 554 (Pubitemid 34113039)
-
(2002)
Applied and Environmental Microbiology
, vol.68
, Issue.2
, pp. 545-554
-
-
Chhabra, S.R.1
Shockley, K.R.2
Ward, D.E.3
Kelly, R.M.4
-
16
-
-
77958177184
-
Biochemical characterization and crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima
-
J.H. Pereira, Z. Chen, R.P. McAndrew, R. Sapra, S.R. Chhabra, K.L. Sale, B.A. Simmons, and P.D. Adams Biochemical characterization and crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima J. Struct. Biol. 172 2010 372 379
-
(2010)
J. Struct. Biol.
, vol.172
, pp. 372-379
-
-
Pereira, J.H.1
Chen, Z.2
McAndrew, R.P.3
Sapra, R.4
Chhabra, S.R.5
Sale, K.L.6
Simmons, B.A.7
Adams, P.D.8
-
17
-
-
78449268868
-
Microfluidic glycosyl hydrolase screening for biomass-to-biofuel conversion
-
R. Bharadwaj, Z. Chen, S. Datta, B.M. Holmes, R. Sapra, B.A. Simmons, P.D. Adams, and A.K. Singh Microfluidic glycosyl hydrolase screening for biomass-to-biofuel conversion Anal. Chem. 82 2010 9513 9520
-
(2010)
Anal. Chem.
, vol.82
, pp. 9513-9520
-
-
Bharadwaj, R.1
Chen, Z.2
Datta, S.3
Holmes, B.M.4
Sapra, R.5
Simmons, B.A.6
Adams, P.D.7
Singh, A.K.8
-
18
-
-
0034846215
-
Production of selenomethionine-labelled proteins using simplified culture conditions and generally applicable host/vector systems
-
DOI 10.1007/s002530100690
-
S.A. Guerrero, H.J. Hecht, B. Hofmann, H. Biebl, and M. Singh Production of selenomethionine-labelled proteins using simplified culture conditions and generally applicable host/vector systems Appl. Microbiol. Biotechnol. 56 2001 718 723 (Pubitemid 32831598)
-
(2001)
Applied Microbiology and Biotechnology
, vol.56
, Issue.5-6
, pp. 718-723
-
-
Guerrero, S.A.1
Hecht, H.-J.2
Hofmann, B.3
Biebl, H.4
Singh, M.5
-
20
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
DOI 10.1016/S0076-6879(97)76066-X
-
Z. Otwinowski, and W. Minor Processing of X-ray diffraction data collected in oscillation mode Methods Enzymol. 276 1997 307 326 (Pubitemid 27085611)
-
(1997)
Methods in Enzymology
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
21
-
-
0001897686
-
Assessment of phase accuracy by cross validation: The free R value. Methods and applications
-
A.T. Brunger Assessment of phase accuracy by cross validation: the free R value. Methods and applications Acta Crystallogr. D Biol. Crystallogr. 49 1993 24 36
-
(1993)
Acta Crystallogr. D Biol. Crystallogr.
, vol.49
, pp. 24-36
-
-
Brunger, A.T.1
-
22
-
-
0347383761
-
SOLVE and RESOLVE: Automated Structure Solution and Density Modification
-
DOI 10.1016/S0076-6879(03)74002-6
-
T.C. Terwilliger SOLVE and RESOLVE: automated structure solution and density modification Methods Enzymol. 374 2003 22 37 (Pubitemid 37531804)
-
(2003)
Methods in Enzymology
, vol.374
, pp. 22-37
-
-
Terwilliger, T.C.1
-
24
-
-
0032964481
-
Automated protein model building combined with iterative structure refinement
-
DOI 10.1038/8263
-
A. Perrakis, R. Morris, and V.S. Lamzin Automated protein model building combined with iterative structure refinement Nat. Struct. Biol. 6 1999 458 463 (Pubitemid 29218016)
-
(1999)
Nature Structural Biology
, vol.6
, Issue.5
, pp. 458-463
-
-
Perrakis, A.1
Morris, R.2
Lamzin, V.S.3
-
25
-
-
34447508216
-
Phaser crystallographic software
-
DOI 10.1107/S0021889807021206, PII S0021889807021206
-
A.J. McCoy, R.W. Grosse-Kunstleve, P.D. Adams, M.D. Winn, L.C. Storoni, and R.J. Read Phaser crystallographic software J. Appl. Crystallogr. 40 2007 658 674 (Pubitemid 47080256)
-
(2007)
Journal of Applied Crystallography
, vol.40
, Issue.4
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
Read, R.J.6
-
27
-
-
0032790081
-
XtalView/Xfit - A versatile program for manipulating atomic coordinates and electron density
-
DOI 10.1006/jsbi.1999.4094
-
D.E. McRee XtalView/Xfit-a versatile program for manipulating atomic coordinates and electron density J. Struct. Biol. 125 1999 156 165 (Pubitemid 29402600)
-
(1999)
Journal of Structural Biology
, vol.125
, Issue.2-3
, pp. 156-165
-
-
McRee, D.E.1
-
28
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
A.T. Brunger, P.D. Adams, G.M. Clore, W.L. DeLano, P. Gros, R.W. Grosse-Kunstleve, J.S. Jiang, J. Kuszewski, M. Nilges, N.S. Pannu, R.J. Read, L.M. Rice, T. Simonson, and G.L. Warren Crystallography & NMR system: a new software suite for macromolecular structure determination Acta Crystallogr. D Biol. Crystallogr. 54 1998 905 921
-
(1998)
Acta Crystallogr. D Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
29
-
-
14244272868
-
PHENIX: Building new software for automated crystallographic structure determination
-
DOI 10.1107/S0907444902016657
-
P.D. Adams, R.W. Grosse-Kunstleve, L.W. Hung, T.R. Ioerger, A.J. McCoy, N.W. Moriarty, R.J. Read, J.C. Sacchettini, N.K. Sauter, and T.C. Terwilliger PHENIX: building new software for automated crystallographic structure determination Acta Crystallogr. D Biol. Crystallogr. 58 2002 1948 1954 (Pubitemid 35337293)
-
(2002)
Acta Crystallographica Section D: Biological Crystallography
, vol.58
, Issue.11
, pp. 1948-1954
-
-
Adams, P.D.1
Grosse-Kunstleve, R.W.2
Hung, L.-W.3
Ioerger, T.R.4
McCoy, A.J.5
Moriarty, N.W.6
Read, R.J.7
Sacchettini, J.C.8
Sauter, N.K.9
Terwilliger, T.C.10
-
30
-
-
0027335772
-
280 is the nucleophile in the active site of Clostridium thermocellum CelC, a family A endo-β-1,4-glucanase
-
Q. Wang, D. Tull, A. Meinke, N.R. Gilkes, R.A. Waren, R. Aebersold, and S.G. Withers Glu280 is the nucleophile in the active site of Clostridium thermocellum CelC, a family A endo-β-1,4-glucanase J. Biol. Chem. 268 1993 14096 14102 (Pubitemid 23195528)
-
(1993)
Journal of Biological Chemistry
, vol.268
, Issue.19
, pp. 14096-14102
-
-
Wang, Q.1
Tull, D.2
Meinke, A.3
Gilkes, N.R.4
Warren, R.A.J.5
Aebersold, R.6
Withers, S.G.7
-
31
-
-
0029645404
-
Structures and mechanisms of glycosyl hydrolases
-
G. Davies, and B. Henrissat Structures and mechanisms of glycosyl hydrolases Structure 3 1995 853 859
-
(1995)
Structure
, vol.3
, pp. 853-859
-
-
Davies, G.1
Henrissat, B.2
-
32
-
-
34547134972
-
Characterization and three-dimensional structures of two distinct bacterial xyloglucanases from families GH5 and GH12
-
DOI 10.1074/jbc.M700224200
-
T.M. Gloster, F.M. Ibatullin, K. Macauley, J.M. Eklof, S. Roberts, J.P. Turkenburg, M.E. Bjornvad, P.L. Jorgensen, S. Danielsen, K.S. Johansen, T.V. Borchert, K.S. Wilson, H. Brumer, and G.J. Davies Characterization and three-dimensional structures of two distinct bacterial xyloglucanases from families GH5 and GH12 J. Biol. Chem. 282 2007 19177 19189 (Pubitemid 47100152)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.26
, pp. 19177-19189
-
-
Gloster, T.M.1
Ibatullin, F.M.2
Macauley, K.3
Eklof, J.M.4
Roberts, S.5
Turkenburg, J.P.6
Bjornvad, M.E.7
Jorgensen, P.L.8
Danielsen, S.9
Johansen, K.S.10
Borchert, T.V.11
Wilson, K.S.12
Brumer, H.13
Davies, G.J.14
-
33
-
-
0029740205
-
Crystal structure of thermostable family 5 endocellulase E1 from Acidothermus cellulolyticus in complex with cellotetraose
-
DOI 10.1021/bi9604439
-
J. Sakon, W.S. Adney, M.E. Himmel, S.R. Thomas, and P.A. Karplus Crystal structure of thermostable family 5 endocellulase E1 from Acidothermus cellulolyticus in complex with cellotetraose Biochemistry 35 1996 10648 10660 (Pubitemid 26279644)
-
(1996)
Biochemistry
, vol.35
, Issue.33
, pp. 10648-10660
-
-
Sakon, J.1
Adney, W.S.2
Himmel, M.E.3
Thomas, S.R.4
Andrew Karplus, P.5
|