A DExD/H box RNA helicase is important for K+ deprivation responses and tolerance in Arabidopsis thaliana

FEBS Journal

Volumn 278, Issue 13, 2011, Pages 2296-2306

  Xu, Rui Rui ^a   Qi, Sheng Dong ^a   Lu, Long Tao ^a   Chen, Chang Tian ^a   Wu, Chang Ai ^a   Zheng, Cheng Chao ^a  

^a Shandong AgriculturalUniversity   (China)

Author keywords

Arabidopsis thaliana; DExD H box RNA helicase; K+ deprivation; K+ flux; seed germination

Indexed keywords

ARABIDOPSIS PROTEIN; BETA GLUCURONIDASE; DEAD BOX PROTEIN; MESSENGER RNA; PROTEIN AKT1; PROTEIN CBL1; PROTEIN CBL9; PROTEIN CIPK23; UNCLASSIFIED DRUG; ZEATIN;

ADAPTATION; ARABIDOPSIS; ARTICLE; COLD TREATMENT; CONTROLLED STUDY; DOWN REGULATION; GENE OVEREXPRESSION; GERMINATION; HISTOCHEMISTRY; NONHUMAN; PLANT LEAF; PLANT RESPONSE; PLANT ROOT; PLANT STRESS; POTASSIUM DEFICIENCY; POTASSIUM TRANSPORT; PRIORITY JOURNAL; TRANSGENIC PLANT; VASCULAR TISSUE;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; DEAD-BOX RNA HELICASES; DRUG TOLERANCE; GENE EXPRESSION REGULATION, PLANT; PLANT LEAVES; PLANT ROOTS; PLANTS, GENETICALLY MODIFIED; POTASSIUM; RNA, PLANT; SEEDLING;

ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 80955178789     PISSN: 1742464X     EISSN: 17424658     Source Type: Journal    
DOI: 10.1111/j.1742-4658.2011.08147.x     Document Type: Article

References (62)

1. Jung JY, Shin R, &, Schachtman DP, (2009) Ethylene mediates response and tolerance to potassium deprivation in Arabidopsis. Plant Cell 21, 607-621.
2. Sparks DL, &, Huang PM, (1985) Physical chemistry of soil potassium. In Potassium in Agriculture (, Munson RD, ed.), pp. 201-276. American Society of Agronomy, Madison, WI.
3. Munson RD, (ed.) (1985) Potassium in Agriculture. American Society of Agronomy, Madison, WI.
4. Mengel K, &, Kirkby EA, (2001) Potassium. In Principles of Plant Nutrition (, Mengel K, eds), pp. 503-509. Kluwer Academic Publishers, Norwell, MA.
5. Kochian LV, &, Lucas WJ, (1988) Potassium transport in plants. In Advances in Botanical Research, Vol. 15 (, Callow JA, ed.), pp. 93-178. Academic, London.
6. Maser P, Thomine S, Schroeder JI, Ward JM, Hirschi K, Sze H, Talke IN, Amtmann A, Maathuis FJM, &, Sanders D, (2001) Phylogenetic relationships within cation transporter families of Arabidopsis. Plant Physiol 126, 1646-1667. (Pubitemid 32760268)
7. + transport in higher plants. Annu Rev Plant Biol 54, 575-603. (Pubitemid 37400006)
8. + transporters from Arabidopsis that are conserved across phyla. FEBS Lett 415, 206-211. (Pubitemid 27430068)
9. Santa-María GE, Rubio F, Dubcovsky J, &, Rodríguez- Navarro A, (1997) The HAK1 gene of barley is a member of a large gene family and encodes a high-affinity potassium transporter. Plant Cell 9, 2281-2289. (Pubitemid 28174062)
10. + transporter from Arabidopsis. Plant Cell 10, 63-73. (Pubitemid 28309815)
11. Kim EJ, Kwak JM, Uozumi N, &, Schroeder JI, (1998) AtKUP1: an Arabidopsis gene encoding high-affinity potassium transport activity. Plant Cell 10, 51-62. (Pubitemid 28309814)
12. + response in Arabidopsis. Proc Natl Acad Sci USA 103, 12625-12630. (Pubitemid 44267309)
13. + transporter AKT1 in Arabidopsis. Cell 125, 1347-1360. (Pubitemid 43929097)
14. Shin R, &, Schachtman DP, (2004) Hydrogen peroxide mediates plant root cell response to nutrient deprivation. Proc Natl Acad Sci USA 23, 8827-8832. (Pubitemid 38745856)
15. Schachtman DP, &, Shin R, (2007) Nutrient sensing and signaling: NPKS. Annu Rev Plant Biol 58, 47-69. (Pubitemid 46992026)
16. de la Cruz J, Kressler D, &, Linder P, (1999) Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. Trends Biochem Sci 24, 192-198. (Pubitemid 29348454)
17. Tanner NK, &, Linder P, (2001) DExD/H box RNA helicases: from generic motors to specific dissociation functions. Mol Cell 8, 251-262. (Pubitemid 32831543)
18. Tanner NK, Cordin O, Banroques J, Doere M, &, Linder P, (2003) The Q motif: a newly identified motif in DEAD box helicases may regulate ATP binding and hydrolysis. Mol Cell 11, 127-138. (Pubitemid 36126596)
19. Rocak S, &, Linder P, (2004) DEAD-box proteins: the driving forces behind RNA metabolism. Nat Rev Mol Cell Biol 5, 232-241. (Pubitemid 38325804)
20. Lorsch JR, (2002) RNA chaperones exist and DEAD box proteins get a life. Cell 109, 797-800. (Pubitemid 34785994)
21. Gong Z, Lee H, Xiong L, Jagendorf A, Stevenson B, &, Zhu JK, (2002) RNA helicase-like protein as an early regulator of transcription factors for plant chilling and freezing tolerance. Proc Natl Acad Sci USA 99, 11507-11512. (Pubitemid 34920954)
22. Gong Z, Dong C, Lee H, Zhu J, Xiong L, &, Gong D, (2005) A DEAD box RNA helicase is essential for RNA export and important for development and stress responses in Arabidopsis. Plant Cell 17, 256-267. (Pubitemid 41673001)
23. Kant P, Kant S, Gordon M, Shaked R, &, Barak S, (2007) STRESS RESPONSE SUPPRESSOR1 and STRESS RESPONSE SUPPRESSOR2, two DEAD-Box RNA helicases that attenuate Arabidopsis responses to multiple abiotic stresses. Plant Physiol 145, 814-830. (Pubitemid 350127618)
24. Jacobsen SE, Running MP, &, Meyerowitz EM, (1999) Disruption of an RNA helicase/RNAse III gene in Arabidopsis causes unregulated cell division in floral meristems. Development 126, 5231-5243. (Pubitemid 30015917)
25. Park W, Li J, Song R, Messing J, &, Chen X, (2002) CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana. Curr Biol 12, 1484-1495. (Pubitemid 35036646)
26. Inagaki S, Suzuki T, Ohto MA, Urawa H, Horiuchi T, Nakamura K, &, Morikami A, (2006) Arabidopsis TEBICHI, with helicase and DNA polymerase domains, is required for regulated cell division and differentiation in meristems. Plant Cell 18, 879-892. (Pubitemid 43956142)
27. Kobayashi K, Otegui MS, Krishnakumar S, Mindrinos M, &, Zambryski P, (2007) INCREASED SIZE EXCLUSION LIMIT2 encodes a putative DEVH box RNA helicase involved in plasmodesmata function during Arabidopsis embryogenesis. Plant Cell 19, 1885-1897. (Pubitemid 47218847)
28. + nutrition. Plant J 9, 195-203.
29. Hirsch RE, Lewis BD, Spalding EP, &, Sussmanm MR, (1998) A role for the AKT1 potassium channel in plant nutrition. Science 280, 918-921. (Pubitemid 28215605)
30. Spalding EP, Hirsch RE, Lewis DR, Qi Z, Sussman MR, &, Lewis BD, (1999) Potassium uptake supporting plant growth in the absence of AKT1 channel activity: inhibition by ammonium and stimulation by sodium. J Gen Physiol 113, 909-918. (Pubitemid 29270416)
31. + channel profile and electrical properties of Arabidopsis root hairs. FEBS Lett 508, 463-469. (Pubitemid 33135492)
32. Le BotN, Antony C, White J, Karsenti E, &, Vernos I, (1998) Role of xklp3, a subunit of the Xenopus kinesin II heterotrimeric complex, in membrane transport between the endoplasmic reticulum and the Golgi apparatus. J Cell Biol 143, 1559-1573. (Pubitemid 29006503)
33. + transport in plants: physiology and molecular biology. J Plant Physiol 166, 447-466.
34. Silverman E, Edwalds-Gilbert G, &, Lin RJ, (2003) DExD/H-box proteins and their partners: helping RNA helicases unwind. Gene 312, 1-16. (Pubitemid 37338108)
35. Fuller-Pace FV, (2006) DExD/H box RNA helicases: multifunctional proteins with important roles in transcriptional regulation. Nucleic Acids Res 34, 4206-4215. (Pubitemid 44542200)
36. Linder P, &, Owttrim GW, (2009) Plant RNA helicases: linking aberrant and silencing RNA. Trends Plant Sci 14, 344-352.
37. Venkataraman T, Valdes M, Elsby R, Kakuta S, Caceres G, Saijo S, Iwakura Y, &, Barber GN, (2007) Loss of DExD/H box RNA helicase LGP2 manifests disparate antiviral responses. J Immunol 178, 6444-6455. (Pubitemid 46717428)
38. Kemp C, &, Imler JL, (2009) Antiviral immunity in drosophila. Curr Opin Immunol 21, 3-9.
39. Sahni A, Wang N, &, Alexis JD, (2010) UAP56 is an important regulator of protein synthesis and growth in cardiomyocytes. Biochem Biophys Res Commun 393, 106-110.
40. Ashley MK, Grant M, &, Grabov A, (2006) Plant responses to potassium deficiencies: a role for potassium transport proteins. J Exp Bot 57, 425-436. (Pubitemid 43063794)
41. Sentenac H, Bonneaud N, Minet M, Lacroute F, Salmon JM, Gaymard F, &, Grignon C, (1992) Cloning and expression in yeast of a plant potassium ion transport system. Science 256, 663-665.
42. Kudla J, Xu Q, Harter K, Gruissem W, &, Luan S, (1999) Genes for calcineurin B-like proteins in Arabidopsis are differentially regulated by stress signals. Proc Natl Acad Sci USA 96, 4718-4723. (Pubitemid 29190402)
43. Cheong YH, Kim KN, Pandey GK, Gupta R, Grant JJ, &, Luan S, (2003) CBL1, a calcium sensor that differentially regulates salt, drought, and cold responses in Arabidopsis. Plant Cell 15, 1833-1845. (Pubitemid 37078338)
44. Pandey GK, Cheong YH, Kim KN, Grant JJ, Li L, Hung W, D'Angelo C, Weinl S, Kudla J, &, Luan S, (2004) The calcium sensor calcineurin B-like 9 modulates abscisic acid sensitivity and biosynthesis in Arabidopsis. Plant Cell 16, 1912-1924. (Pubitemid 38908784)
45. Maathuis FJMM, &, Sanders D, (1994) Mechanism of high-affinity potassium uptake in roots of Arabidopsis thaliana. Proc Natl Acad Sci USA 91, 9272-9276. (Pubitemid 24297896)
46. + transporters. J Exp Bot 48, 451-458. (Pubitemid 27235947)
47. Anderson JA, Huprikar SS, Kochian LV, Lucas WJ, &, Gaber RF, (1992) Functional expression of a probable Arabidopsis thaliana potassium channel in Saccharomyces cerevisiae. Proc Natl Acad Sci USA 89, 3736-3740.
48. 2+ dependency. EMBO J 16, 2565-2575. (Pubitemid 27226196)
49. Rubio F, Santa-Maria GE, &, Rodriguez-Navarro A, (2000) Cloning of Arabidopsis and barley cDNA encoding HAK potassium transporters in root and shoot cells. Physiol Plant 109, 34-43. (Pubitemid 30334207)
50. Shabala L, Cuin TA, Newman IA, &, Shabala S, (2005) Salinity-induced ion flux patterns from the excised roots of Arabidopsis sos mutants. Planta 222, 1041-1050. (Pubitemid 41706041)
51. + efflux and GMPase activity. Plant Cell Environ 33, 1529-1542.
52. + homeostasis in NaCl-stressed Populus euphratica cells. Plant Cell Environ 33, 943-958.
53. +-ATPase through interaction with the PKS5 kinase. Plant Cell 22, 1313-1332.
54. Hasegawa H, (1996) Selection for mutants with low nitrate uptake ability in rice (Oryza sativa). Physiol Plant 96, 199-204.
55. White PJ, &, Broadley MR, (2000) Mechanisms of caesium uptake by plants. New Phytol 147, 241-256.
56. Hampton CR, Bowen HC, Broadley MR, Hammond JP, Mead A, Payne KA, Pritchard J, &, White PJ, (2004) Cesium toxicity in Arabidopsis. Plant Physiol 136, 3824-3837.
57. Liu HH, Tian X, Li YJ, Wu CA, &, Zheng CC, (2008) Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana. RNA 14, 1-8.
58. Xue H, Yang YT, Wu CA, Yang GD, Zhang MM, &, Zheng CC, (2005) TM2, a novel strong matrix attachment region isolated from tobacco, increases transgene expression in transgenic rice calli and plants. Theor Appl Genet 110, 620-627. (Pubitemid 40383378)
59. Clough SJ, &, Bent AF, (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 16, 735-743.
60. Jefferson RA, Kavanagh TA, &, Bevan MW, (1987) GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J 6, 3901-3907.
61. + antiporter under high salinity. Tree Physiol 30, 1570-1585.
62. Sun J, Chen S, Dai S, Wang R, Li N, Shen X, Zhou X, Lu C, Zheng X, Hu Z, et al. (2009) NaCl-induced alternations of cellular and tissue ion fluxes in roots of salt-resistant and salt-sensitive poplar species. Plant Physiol 149, 1141-1153.