-
1
-
-
0035443118
-
Glycoside hydrolases and glycosyltransferases: Families and functional modules
-
DOI 10.1016/S0959-440X(00)00253-0
-
Bourne Y, &, Henrissat B, (2001) Glycoside hydrolases and glycosyltransferases: families and functional modules. Curr Opin Struct Biol 11, 593-600. (Pubitemid 32972023)
-
(2001)
Current Opinion in Structural Biology
, vol.11
, Issue.5
, pp. 593-600
-
-
Bourne, Y.1
Henrissat, B.2
-
2
-
-
4744368323
-
Carbohydrate-binding modules: Fine-tuning polysaccharide recognition
-
DOI 10.1042/BJ20040892
-
Boraston AB, Bolam DN, Gilbert HJ, &, Davies GJ, (2004) Carbohydrate-binding modules: fine-tuning polysaccharide recognition. Biochem J 382, 769-781. (Pubitemid 39312891)
-
(2004)
Biochemical Journal
, vol.382
, Issue.3
, pp. 769-781
-
-
Boraston, A.B.1
Bolam, D.N.2
Gilbert, H.J.3
Davies, G.J.4
-
3
-
-
33846113064
-
Recent structural studies of carbohydrate-binding modules
-
DOI 10.1007/s00018-006-6195-3
-
Hashimoto H, (2006) Recent structural studies of carbohydrate-binding modules. Cell Mol Life Sci 63, 2954-2967. (Pubitemid 46072301)
-
(2006)
Cellular and Molecular Life Sciences
, vol.63
, Issue.24
, pp. 2954-2967
-
-
Hashimoto, H.1
-
4
-
-
33845498615
-
Starch-binding domains in the post-genome era
-
DOI 10.1007/s00018-006-6246-9
-
Machovic M, &, Janecek S, (2006) Starch-binding domains in the post-genome era. Cell Mol Life Sci 63, 2710-2724. (Pubitemid 44913313)
-
(2006)
Cellular and Molecular Life Sciences
, vol.63
, Issue.23
, pp. 2710-2724
-
-
Machovic, M.1
Janecek, S.2
-
5
-
-
33745161547
-
Carbohydrate binding modules: Biochemical properties and novel applications
-
DOI 10.1128/MMBR.00028-05
-
Shoseyov O, Shani Z, &, Levy I, (2006) Carbohydrate binding modules: biochemical properties and novel applications. Microbiol Mol Biol Rev 70, 283-295. (Pubitemid 43895029)
-
(2006)
Microbiology and Molecular Biology Reviews
, vol.70
, Issue.2
, pp. 283-295
-
-
Shoseyov, O.1
Shani, Z.2
Levy, I.3
-
6
-
-
30344432688
-
Assessing protein disorder and induced folding
-
DOI 10.1002/prot.20750
-
Receveur-Brechot V, Bourhis JM, Uversky VN, Canard B, &, Longhi S, (2006) Assessing protein disorder and induced folding. Proteins 62, 24-45. (Pubitemid 43063003)
-
(2006)
Proteins: Structure, Function and Genetics
, vol.62
, Issue.1
, pp. 24-45
-
-
Receveur-Brehot, V.1
Bourhis, J.-M.2
Uversky, V.N.3
Canard, B.4
Longhi, S.5
-
7
-
-
0037174952
-
Dimension, shape, and conformational flexibility of a two domain fungal cellulase in solution probed by small angle X-ray scattering
-
DOI 10.1074/jbc.M205404200
-
Receveur V, Czjzek M, Schulein M, Panine P, &, Henrissat B, (2002) Dimension, shape, and conformational flexibility of a two domain fungal cellulase in solution probed by small angle X-ray scattering. J Biol Chem 277, 40887-40892. (Pubitemid 35215675)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.43
, pp. 40887-40892
-
-
Receveur, V.1
Czjzek, M.2
Schulein, M.3
Panine, P.4
Henrissat, B.5
-
8
-
-
33644676351
-
Structural basis of cellulosome efficiency explored by small angle x-ray scattering
-
DOI 10.1074/jbc.M503168200
-
Hammel M, Fierobe HP, Czjzek M, Kurkal V, Smith JC, Bayer EA, Finet S, &, Receveur-Brechot V, (2005) Structural basis of cellulosome efficiency explored by small angle X-ray scattering. J Biol Chem 280, 38562-38568. (Pubitemid 43853756)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.46
, pp. 38562-38568
-
-
Hammel, M.1
Fierobe, H.-P.2
Czjzek, M.3
Kurkal, V.4
Smith, J.C.5
Bayer, E.A.6
Finet, S.7
Receveur-Brechot, V.8
-
9
-
-
18044372844
-
Structure of a full length psychrophilic cellulase from Pseudoalteromonas haloplanktis revealed by X-ray diffraction and small angle X-ray scattering
-
DOI 10.1016/j.jmb.2005.03.026
-
Violot S, Aghajari N, Czjzek M, Feller G, Sonan GK, Gouet P, Gerday C, Haser R, &, Receveur-Brechot V, (2005) Structure of a full length psychrophilic cellulase from Pseudoalteromonas haloplanktis revealed by X-ray diffraction and small angle X-ray scattering. J Mol Biol 348, 1211-1224. (Pubitemid 40602378)
-
(2005)
Journal of Molecular Biology
, vol.348
, Issue.5
, pp. 1211-1224
-
-
Violot, S.1
Aghajari, N.2
Czjzek, M.3
Feller, G.4
Sonan, G.K.5
Gouet, P.6
Gerday, C.7
Haser, R.8
Receveur-Brechot, V.9
-
10
-
-
22144442718
-
Protein disorder: Conformational distribution of the flexible linker in a chimeric double cellulase
-
DOI 10.1529/biophysj.104.050146
-
von Ossowski I, Eaton JT, Czjzek M, Perkins SJ, Frandsen TP, Schulein M, Panine P, Henrissat B, &, Receveur-Brechot V, (2005) Protein disorder: conformational distribution of the flexible linker in a chimeric double cellulase. Biophys J 88, 2823-2832. (Pubitemid 40976148)
-
(2005)
Biophysical Journal
, vol.88
, Issue.4
, pp. 2823-2832
-
-
Von Ossowski, I.1
Eaton, J.T.2
Czjzek, M.3
Perkins, S.J.4
Frandsen, T.P.5
Schulein, M.6
Panine, P.7
Henrissat, B.8
Receveur-Brechot, V.9
-
11
-
-
0034713903
-
Structural similarities and evolutionary relationships in chloride-dependent α-amylases
-
DOI 10.1016/S0378-1119(00)00229-8, PII S0378111900002298
-
D'Amico S, Gerday C, &, Feller G, (2000) Structural similarities and evolutionary relationships in chloride-dependent alpha-amylases. Gene 253, 95-105. (Pubitemid 30488890)
-
(2000)
Gene
, vol.253
, Issue.1
, pp. 95-105
-
-
D'Amico, S.1
Gerday, C.2
Feller, G.3
-
12
-
-
1642458395
-
Horizontal gene transfer from Eukarya to Bacteria and domain shuffling: The α-amylase model
-
DOI 10.1007/s00018-003-3334-y
-
Da Lage JL, Feller G, &, Janecek S, (2004) Horizontal gene transfer from Eukarya to bacteria and domain shuffling: the alpha-amylase model. Cell Mol Life Sci 61, 97-109. (Pubitemid 38121903)
-
(2004)
Cellular and Molecular Life Sciences
, vol.61
, Issue.1
, pp. 97-109
-
-
Da Lage, J.-L.1
Feller, G.2
Janecek, S.3
-
13
-
-
0036803243
-
Intrinsically unstructured proteins
-
DOI 10.1016/S0968-0004(02)02169-2, PII S0968000402021692
-
Tompa P, (2002) Intrinsically unstructured proteins. Trends Biochem Sci 27, 527-533. (Pubitemid 35279598)
-
(2002)
Trends in Biochemical Sciences
, vol.27
, Issue.10
, pp. 527-533
-
-
Tompa, P.1
-
14
-
-
0023645034
-
Hydrophobicity scales and computational techniques for detecting amphipathic structures in proteins
-
Cornette JL, Cease KB, Margalit H, Spouge JL, Berzofsky JA, &, DeLisi C, (1987) Hydrophobicity scales and computational techniques for detecting amphipathic structures in proteins. J Mol Biol 195, 659-685.
-
(1987)
J Mol Biol
, vol.195
, pp. 659-685
-
-
Cornette, J.L.1
Cease, K.B.2
Margalit, H.3
Spouge, J.L.4
Berzofsky, J.A.5
Delisi, C.6
-
16
-
-
0025844982
-
Thermodynamics of hydrolysis of oligosaccharides
-
Goldberg RN, Bell D, Tewari YB, &, McLaughlin MA, (1991) Thermodynamics of hydrolysis of oligosaccharides. Biophys Chem 40, 69-76.
-
(1991)
Biophys Chem
, vol.40
, pp. 69-76
-
-
Goldberg, R.N.1
Bell, D.2
Tewari, Y.B.3
McLaughlin, M.A.4
-
17
-
-
33646087677
-
Kinetics and energetics of ligand binding determined by microcalorimetry: Insights into active site mobility in a psychrophilic alpha-amylase
-
D'Amico S, Sohier JS, &, Feller G, (2006) Kinetics and energetics of ligand binding determined by microcalorimetry: insights into active site mobility in a psychrophilic alpha-amylase. J Mol Biol 358, 1296-1304.
-
(2006)
J Mol Biol
, vol.358
, pp. 1296-1304
-
-
D'Amico, S.1
Sohier, J.S.2
Feller, G.3
-
19
-
-
70350348011
-
NMR spectroscopy brings invisible protein states into focus
-
Baldwin AJ, &, Kay LE, (2009) NMR spectroscopy brings invisible protein states into focus. Nat Chem Biol 5, 808-814.
-
(2009)
Nat Chem Biol
, vol.5
, pp. 808-814
-
-
Baldwin, A.J.1
Kay, L.E.2
-
20
-
-
77956715871
-
Hydrogen bonding and chemical reactivity
-
Hibbert F, &, Emsley J, (1990) Hydrogen bonding and chemical reactivity. Adv Phys Organ Chem 26, 255-379.
-
(1990)
Adv Phys Organ Chem
, vol.26
, pp. 255-379
-
-
Hibbert, F.1
Emsley, J.2
-
21
-
-
0035449064
-
More hydrogen bonds for the (structural) biologist
-
DOI 10.1016/S0968-0004(01)01935-1, PII S0968000401019351
-
Weiss MS, Brandl M, Suhnel J, Pal D, &, Hilgenfeld R, (2001) More hydrogen bonds for the (structural) biologist. Trends Biochem Sci 26, 521-523. (Pubitemid 32823428)
-
(2001)
Trends in Biochemical Sciences
, vol.26
, Issue.9
, pp. 521-523
-
-
Weiss, M.S.1
Brandl, M.2
Suhnel, J.3
Pal, D.4
Hilgenfeld, R.5
-
22
-
-
34347226647
-
On the nature of hydrogen bonds: An overview on computational studies and a word about patterns
-
Rozas I, (2007) On the nature of hydrogen bonds: an overview on computational studies and a word about patterns. Phys Chem Chem Phys 9, 2782-2790.
-
(2007)
Phys Chem Chem Phys
, vol.9
, pp. 2782-2790
-
-
Rozas, I.1
-
23
-
-
78649852734
-
The O-glycosylated linker from the Trichoderma reesei Family 7 cellulase is a flexible, disordered protein
-
Beckham GT, Bomble YJ, Matthews JF, Taylor CB, Resch MG, Yarbrough JM, Decker SR, Bu L, Zhao X, McCabe C, et al. (2010) The O-glycosylated linker from the Trichoderma reesei Family 7 cellulase is a flexible, disordered protein. Biophys J 99, 3773-3781.
-
(2010)
Biophys J
, vol.99
, pp. 3773-3781
-
-
Beckham, G.T.1
Bomble, Y.J.2
Matthews, J.F.3
Taylor, C.B.4
Resch, M.G.5
Yarbrough, J.M.6
Decker, S.R.7
Bu, L.8
Zhao, X.9
McCabe, C.10
-
24
-
-
57049095821
-
Function and structure of inherently disordered proteins
-
Dunker AK, Silman I, Uversky VN, &, Sussman JL, (2008) Function and structure of inherently disordered proteins. Curr Opin Struct Biol 18, 756-764.
-
(2008)
Curr Opin Struct Biol
, vol.18
, pp. 756-764
-
-
Dunker, A.K.1
Silman, I.2
Uversky, V.N.3
Sussman, J.L.4
-
25
-
-
0024260626
-
Weakly polar interactions in proteins
-
Burley SK, &, Petsko GA, (1988) Weakly polar interactions in proteins. Adv Protein Chem 39, 125-189.
-
(1988)
Adv Protein Chem
, vol.39
, pp. 125-189
-
-
Burley, S.K.1
Petsko, G.A.2
-
26
-
-
76249128506
-
A fast method for large-scale de novo peptide and miniprotein structure prediction
-
Maupetit J, Derreumaux P, &, Tuffery P, (2010) A fast method for large-scale de novo peptide and miniprotein structure prediction. J Comput Chem 31, 726-738.
-
(2010)
J Comput Chem
, vol.31
, pp. 726-738
-
-
Maupetit, J.1
Derreumaux, P.2
Tuffery, P.3
-
27
-
-
50049097448
-
Intrinsic disorder in scaffold proteins: Getting more from less
-
Cortese MS, Uversky VN, &, Dunker AK, (2008) Intrinsic disorder in scaffold proteins: getting more from less. Prog Biophys Mol Biol 98, 85-106.
-
(2008)
Prog Biophys Mol Biol
, vol.98
, pp. 85-106
-
-
Cortese, M.S.1
Uversky, V.N.2
Dunker, A.K.3
-
28
-
-
20444376186
-
The interplay between structure and function in intrinsically unstructured proteins
-
DOI 10.1016/j.febslet.2005.03.072, PII S0014579305004242
-
Tompa P, (2005) The interplay between structure and function in intrinsically unstructured proteins. FEBS Lett 579, 3346-3354. (Pubitemid 40804685)
-
(2005)
FEBS Letters
, vol.579
, Issue.15
, pp. 3346-3354
-
-
Tompa, P.1
-
29
-
-
0036128797
-
Natively unfolded proteins: A point where biology waits for physics
-
DOI 10.1110/ps.4210102
-
Uversky VN, (2002) Natively unfolded proteins: a point where biology waits for physics. Protein Sci 11, 739-756. (Pubitemid 34241284)
-
(2002)
Protein Science
, vol.11
, Issue.4
, pp. 739-756
-
-
Uversky, V.N.1
-
30
-
-
0141861067
-
Protein folding revisited. A polypeptide chain at the folding - Misfolding - Nonfolding cross-roads: Which way to go?
-
DOI 10.1007/s00018-003-3096-6
-
Uversky VN, (2003) Protein folding revisited. A polypeptide chain at the folding-misfolding-nonfolding cross-roads: which way to go? Cell Mol Life Sci 60, 1852-1871. (Pubitemid 37222583)
-
(2003)
Cellular and Molecular Life Sciences
, vol.60
, Issue.9
, pp. 1852-1871
-
-
Uversky, V.N.1
-
31
-
-
77949916296
-
Understanding protein non-folding
-
Uversky VN, &, Dunker AK, (2010) Understanding protein non-folding. Biochim Biophys Acta 1804, 1231-1264.
-
(2010)
Biochim Biophys Acta
, vol.1804
, pp. 1231-1264
-
-
Uversky, V.N.1
Dunker, A.K.2
-
32
-
-
65549139776
-
Flexible structures and ligand interactions of tandem repeats consisting of proline, glycine, asparagine, serine, and/or threonine rich oligopeptides in proteins
-
Matsushima N, Yoshida H, Kumaki Y, Kamiya M, Tanaka T, Izumi Y, &, Kretsinger RH, (2008) Flexible structures and ligand interactions of tandem repeats consisting of proline, glycine, asparagine, serine, and/or threonine rich oligopeptides in proteins. Curr Protein Pept Sci 9, 591-610.
-
(2008)
Curr Protein Pept Sci
, vol.9
, pp. 591-610
-
-
Matsushima, N.1
Yoshida, H.2
Kumaki, Y.3
Kamiya, M.4
Tanaka, T.5
Izumi, Y.6
Kretsinger, R.H.7
-
34
-
-
0032524655
-
Characterization of the C-terminal propeptide involved in bacterial wall spanning of α-amylase from the psychrophile Alteromonas haloplanctis
-
DOI 10.1074/jbc.273.20.12109
-
Feller G, D'Amico S, Benotmane AM, Joly F, Van Beeumen J, &, Gerday C, (1998) Characterization of the C-terminal propeptide involved in bacterial wall spanning of alpha-amylase from the psychrophile Alteromonas haloplanctis. J Biol Chem 273, 12109-12115. (Pubitemid 28240571)
-
(1998)
Journal of Biological Chemistry
, vol.273
, Issue.20
, pp. 12109-12115
-
-
Feller, G.1
D'Amico, S.2
Benotmane, A.M.3
Joly, F.4
Van Beeumen, J.5
Gerday, C.6
-
35
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
Altschul SF, Madden TL, Schaffer AA, Zhang JH, Zhang Z, Miller W, &, Lipman DJ, (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402. (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
36
-
-
10344223464
-
Making optimal use of empirical energy functions: Force-field parameterization in crystal space
-
DOI 10.1002/prot.20251
-
Krieger E, Darden T, Nabuurs SB, Finkelstein A, &, Vriend G, (2004) Making optimal use of empirical energy functions: force-field parameterization in crystal space. Proteins 57, 678-683. (Pubitemid 39626989)
-
(2004)
Proteins: Structure, Function and Genetics
, vol.57
, Issue.4
, pp. 678-683
-
-
Krieger, E.1
Darden, T.2
Nabuurs, S.B.3
Finkelstein, A.4
Vriend, G.5
|