Treenetviz: Revealing patterns of networks over tree structures

IEEE Transactions on Visualization and Computer Graphics

Volumn 17, Issue 12, 2011, Pages 2449-2458

  Gou, Liang ^a   Zhang, Xiaolong Luke ^a  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

Author keywords

Compound graph; multiscale and cross scale; network and tree; TreeNetViz; visualization

Indexed keywords

AGGREGATED NETWORKS; COMPOUND GRAPHS; EDGE LENGTH; EDGE WEIGHTS; HIERARCHICAL STRUCTURES; LAYOUT ALGORITHMS; MULTIPLE LEVELS; MULTISCALES; NETWORK DATA; NETWORK PATTERN; NETWORK STRUCTURES; SOCIAL NETWORKS; SPACE-FILLING; TREE STRUCTURES; TREENETVIZ; VISUAL COMPLEXITY; VISUALIZATION AND ANALYSIS;

ALGORITHMS; PLANT EXTRACTS; VISUALIZATION;

TREES (MATHEMATICS);

EID: 80955143423     PISSN: 10772626     EISSN: None     Source Type: Journal    
DOI: 10.1109/TVCG.2011.247     Document Type: Article

References (42)

1. Breiger, R. (1974). The Duality of Persons and Groups. Social Forces, 53, pp. 181-190.
2. Kilduff, M., & Tsai, W. (2003). Social Networks and Organizations. London: Sage Publications Inc.
3. Aldrich, H., & Herker, D. (1977). Boundary Spanning Roles and Organization Structure. The Academy of Management Review, 2(2), pp. 217-230.
4. Fekete, J.-D., Wang, D., Dang, N., Aris, A. & Plaisant, C. (2003). Overlaying Graph Links on Treemaps. In Proceedings of the 2003 IEEE Symposium on Information Visualization (InfoVis'03), Poster Compendium, pp. 82-83.
5. Neumann, P., Schlechtweg, S. & M. S. T.(2005). ArcTrees: Visualizing Relations in Hierarchical Data. In Proceedings of the 2005 Eurographics/IEEE VGTC Symposium on Visualization (EuroVis'05), pp. 53-60.
6. Burch, M. & Diehl, S. (2008), TimeRadarTrees: Visualizing Dynamic Compound Digraphs. Computer Graphics Forum, 27, pp. 823-830.
7. Danny, H. (2006). Hierarchical Edge Bundles: Visualization of Adjacency Relations in Hierarchical Data. IEEE Transactions on Visualization and Computer Graphics, 12, pp. 741-748.
8. Sugiyama, K. & Misue, K.(1991). Visualization of Structural Information: Automatic Drawing of Compound Digraphs. IEEE Transactions on Systems, Man, and Cybernetics, 21(4), pp. 876-892. (Pubitemid 23616561)
9. Bertault, F. & Miller, M. (1999). An Algorithm for Drawing Compound Graphs. In Proceedings of the 7th International Symposium on Graph Drawing (GD'99), pp. 197-204.
10. Christopher, C. (2007). VisLink: Revealing Relationships amongst Visualizations. IEEE Transactions on Visualization and Computer Graphics, 13, pp. 1192-1199.
11. Fung, D. C. Y., Hong, S.-H., Koschutzki, D., Schreiber, F. & Xu, K. (2009). Visual Analysis of Overlapping Biological Networks. In Proceedings of the 2009 13th International Conference Information Visualisation, IEEE Computer Society, 16(18), pp. 337-342.
12. Giacomo, E., W. Didimo, Liotta, G. & Palladino, P. (2009). Visual Analysis of One-to-Many Matched Graphs. In Graph Drawing, Ioannis G. Tollis and Maurizio Patrignani (Eds.). Lecture Notes in Computer Science, 5417, pp. 133-144.
13. Shneiderman, B. & Aris, A. (2006). Network Visualization by Semantic Substrates. IEEE Trans. on Visualization and Computer Graphics, 12(5), pp. 733-740. (Pubitemid 44955598)
14. van Ham, F.(2003). Using Multilevel Call Matrices in Large Software Projects. In Proceedings of the 2003 IEEE Symposium on Information Visualization (InfoVis'03), pp. 227-232.
15. van Ham, F., H.-J. Schulz & Dimicco, M. J. (2009). Honeycomb: Visual Analysis of Large Scale Social Networks. In Proceedings of the 12th IFIP TC 13 International Conference on Human-Computer Interaction: Part II (INTERACT '09), 5727, pp. 429-442.
16. Ghoniem, M., Fekete, J.-D., & Castagliola, P. (2004). A Comparison of the Readability of Graphs Using Node-Link and Matrix-Based Representations. In Proceedings of the 2004 IEEE Symposium on Information Visualization (InfoVis' 04), pp. 17-24. (Pubitemid 40449123)
17. Elmqvist, N., & Fekete, J. (2010). Hierarchical Aggregation for Information Visualization: Overview, Techniques and Design Guidelines. IEEE Trans. on Visualization and Computer Graphics, 14(6), pp. 439-454.
18. Eades, P., & Feng, Q.-W. (1997). Multilevel Visualization of Clustered Graphs. In Proc. of Symposium on Graph Drawing.
19. Huang, M. L., & Eades, P. (1998). A Fully Animated Interactive System for Clustering and Navigating Huge Graphs. In Proc. of Symposium on Graph Drawing, pp. 374-383.
20. Eades, P. (2000). Navigating Clustered Graphs using Force-Directed Methods. Journal of Graph Algorithms and Applications, 4(3), 157.
21. Abello, J., van Ham, F., & Krishnan, N. (2006). ASK-GraphView: A Large Scale Graph Visualization System. IEEE Trans. on Visualization and Computer Graphics, 12(5), pp. 669-676. (Pubitemid 44955590)
22. Auber, D., & Jourdan, F. (2005). Interactive Refinement of Multi-scale Network Clusterings. In Proc. of InfoVis'05, pp. 703-709. (Pubitemid 44458586)
23. Auber, D., Chiricota, Y., Jourdan, F., & Melancon, G. (2003). Multiscale Visualization of Small World Networks. In Proc. of InfoVis'03, pp. 75-81.
24. Archambault, D., Munzner, T., & Auber, D. (2007). Grouse: Feature-Based, Steerable Graph Hierarchy Exploration. In Proc. of EuroVis'07, pp. 67-74.
25. Wu, Y., & Takatsuka, M. (2008). Visualizing Multivariate Networks: A Hybrid Approach. In Proc. of PacificVIS'08.
26. Pretorius, A. J., & Wijk, J. J. V. (2006). Visual Analysis of Multivariate State Transition Graphs. In IEEE Trans. on Visualization and Computer Graphics, 12(5), pp. 685-692. (Pubitemid 44955592)
27. Martin, W. (2006). Visual Exploration of Multivariate Graphs. Proc. of CHI'06, pp. 811-819.
28. Shen, Z., Ma, K. L., & Eliassi-Rad, T. (2006). Visual Analysis of Large Heterogeneous Social Networks by Semantic and Structural Abstraction. IEEE Trans. on Visualization and Computer Graphics, 12(6), pp. 1427-1439. (Pubitemid 44523087)
29. Archambault, D., Munzner, T., & Auber, D. (2008). GrouseFlocks: Steerable Exploration of Graph Hierarchy Space. IEEE Trans. on Visualization and Computer Graphics, 14(4), pp. 900-913. (Pubitemid 351780215)
30. Meyer, M., Munzner, T. & Pfister, H. (2009). MizBee: A Multiscale Synteny Browser. IEEE Transactions on Visualization and Computer Graphics, pp. 897-904.
31. Sugiyama, K. & Misue, K. (1991). Visualization of Structural Information: Automatic Drawing of Compound Digraphs. IEEE Trans. SMC, 4(21), pp. 876-893.
32. Heer, J., Card, S. K., & Landay, J. A. (2005). Prefuse: A Toolkit for Interactive Information Visualization. Proc. of CHI'05.
33. Stasko, J. & Zhang, E. (2000). Focus+Context Display and Navigation Techniques for Enhancing Radial, Space-Filling Hierarchy Visualizations. In Proceedings of the IEEE Symposium on Information Visualization 2000 (InfoVis '00), pp. 57-65. (Pubitemid 32072841)
34. Yang, J., Ward, M. O. & Rundensteiner. E. A. (2002). InterRing: An Interactive Tool for Visually Navigating and Manipulating Hierarchical Structures. In Proceedings of the IEEE Symposium on Information Visualization (InfoVis'02), pp. 77-85.
35. Collins, C., Carpendale, S., & Penn, G (2009). DocuBurst: Visualizing Document Content using Language Structure. In Proceedings of Eurographics/IEEE-VGTC Symposium on Visualization (EuroVis '09), 28(3), pp. 1039-1046.
36. Cui, W., Zhou, H., Qu, H., Wong, P. C. & Li, X. (2008). Geometry-Based Edge Clustering for Graph Visualization. In Proc. of InfoVis'08, pp.1277-1284.
37. Baur, M. & U. Brandes (2005). Crossing Reduction in Circular Layouts. Graph-Theoretic Concepts in Computer Science, 3353, pp. 332-343. (Pubitemid 39743805)
38. Gansner, E. & Y. Koren (2007). Improved Circular Layouts, In Proceedings of the 14th international conference on Graph drawing (GD'06), pp. 386-398.
39. Masuda, S., Kashiwabara, T., Nakajima, K. & Fujisawa, T. (1987). On the NP Completeness of a Computer Network Layout Problem. In Proc. IEEE Intl. Symp. Circuits and Systems, pp. 292-295. (Pubitemid 17630765)
40. Rudell, R. (1993). Dynamic Variable Ordering for Ordered Binary Decision Diagrams. In Proc. IEEE Intl. Conf. Computer Aided Design (ICCAD '93), pp. 42-47.
41. Medical Subject Headings. http://www.nlm.nih.gov/mesh
42. Everett, M., & Borgatti, S. (1999). The Centrality of Groups and Classes. Journal of Mathematical Sociology, 23, pp. 181-202.