Entropic stabilization of proteins by TMAO

Journal of Physical Chemistry B

Volumn 115, Issue 45, 2011, Pages 13401-13407

  Cho, Samuel S ^a,b   Reddy, Govardhan ^a   Straub, John E ^c   Thirumalai, D ^a  

^a University of Maryland   (United States)

^b WAKE FOREST UNIVERSITY   (United States)

^c USA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMIDES; AMINO ACIDS; CONFORMATIONS; HYDROGEN; HYDROGEN BONDS; MONOMERS; PEPTIDES; POLYPEPTIDES; THERMODYNAMIC STABILITY;

CHEMICAL CHAPERONE; DENATURED STATE; DI-PEPTIDES; DIPEPTIDE; ENTROPIC STABILIZATION; EXCLUDED-VOLUME INTERACTIONS; FOLDED PROTEINS; INTRAMOLECULAR INTERACTIONS; NON-POLAR; OSMOLYTES; OSMOTIC STRESS; POLAR SIDE CHAINS; POLYPEPTIDE CHAIN; POSITIVELY CHARGED; PROTEIN BACKBONE; PROTEIN SURFACE; RANDOM COIL; SECONDARY STRUCTURES; TRIMETHYLAMINE N OXIDES;

STABILIZATION;

EID: 80855139861     PISSN: 15206106     EISSN: 15205207     Source Type: Journal    
DOI: 10.1021/jp207289b     Document Type: Article

References (29)

1. Yancey, P. H.; Clark, M. E.; Hand, S. C.; Bowlus, R. D.; Somero, G. N. Science 1982, 217, 1214-1222
2. Wang, A.; Bolen, D. W. Biochemistry 1997, 36, 9101-9108
3. Baskakov, I.; Bolen, D. W. J. Biol. Chem. 1998, 273, 4831-4834
4. Auton, M.; Bolen, D. W. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 15065-15068
5. Zou, Q.; Bennion, B. J.; Daggett, V.; Murphy, K. P. J. Am. Chem. Soc. 2002, 124, 1192-1202
6. Street, T. O.; Bolen, D. W.; Rose, G. D. Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 13997-14002
7. Paul, S.; Patey, G. N. J. Phys. Chem. B 2007, 111, 7932-7933
8. Minton, A. P. Curr. Opin. Struct. Biol. 2000, 10, 34-39
9. Minton, A. P. Biophys. J. 2005, 88, 971-985
10. Cheung, M. S.; Klimov, D.; Thirumalai, D. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 4753-4758
11. Shaw, M. R.; Thirumalai, D. Phys. Rev. A 1991, 44, R4797-R4800
12. Pincus, D. L.; Hyeon, C.; Thirumalai, D. J. Am. Chem. Soc. 2008, 130, 7364-7372
13. Robinson, D. R.; Jencks, W. P. J. Am. Chem. Soc. 1965, 87, 2462-2470
14. O'Brien, E. P.; Dima, R. I.; Brooks, B.; Thirumalai, D. J. Am. Chem. Soc. 2007, 129, 7346-7353
15. Auton, M.; Holthauzen, L. M.; Bolen, D. W. Proc. Natl. Acad. Sci. U.S.A. 2007, 104, 15317-15322
16. Hu, C. Y.; Lynch, G. C.; Kokubo, H.; Pettitt, B. M. Proteins: Struct., Funct., Bioinf. 2010, 78, 695-704
17. Phillips, J. C.; Braun, R.; Wang, W.; Gumbart, J.; Tajkhorshid, E.; Villa, E.; Chipot, C.; Skeel, R. D.; Kale, L.; Schulten, K. J. Comput. Chem. 2005, 26, 1781-1802
18. MacKerell, A. D.; Bashford, D.; Bellott, M.; Dunbrack, R. L.; Evanseck, J. D.; Field, M. J.; Fischer, S.; Gao, J.; Guo, H.; Ha, S.; Joseph-McCarthy, D.; Kuchnir, L.; Kuczera, K.; Lau, F. T. K.; Mattos, C.; Michnick, S.; Ngo, T.; Nguyen, D. T.; Prodhom, B.; Reiher, W. E.; Roux, B.; Schlenkrich, M.; Smith, J. C.; Stote, R.; Straub, J.; Watanabe, M.; Wiorkiewicz-Kuczera, J.; Yin, D.; Karplus, M. J. Phys. Chem. B 1998, 102, 3586-3616
19. MacKerell, A. D.; Feig, M.; Brooks, C. L. J. Am. Chem. Soc. 2004, 126, 698-699
20. Kast, K. M.; Brickmann, J.; Kast, S. M.; Berry, R. S. J. Phys. Chem. A 2003, 107, 5342-5351
21. Teufel, D. P.; Johnson, C. M.; Lum, J. K.; Neuweiler, H. J. Mol. Biol. 2011, 409, 250-262
22. Pauling, L. The nature of the chemical bond and the structure of molecules and crystals; an introduction to modern structural chemistry, 3 rd ed.; Cornell University Press: Ithaca, NY, 1939.
23. Ohnishi, S.; Kamikubo, H.; Onitsuka, M.; Kataoka, M.; Shortle, D. J. Am. Chem. Soc. 2006, 128, 16338-16344
24. Oosawa, F.; Asakura, S. J. Chem. Phys. 1954, 22, 1255-1255
25. Hu, C. Y.; Lynch, G. C.; Kokubo, H.; Pettitt, B. M. Proteins: Struct., Funct., Bioinf. 2010, 78, 695-704
26. Klimov, D. K.; Thirumalai, D. Structure 2003, 11, 295-307
27. Klimov, D. K.; Thirumalai, D. Folding Des. 1998, 3, 127-139
28. Celinski, S. A.; Scholtz, J. M. Protein Sci. 2002, 11, 2048-2051
29. Klimov, D. K.; Straub, J. E.; Thirumalai, D. Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 14760-14765