-
1
-
-
0242693109
-
Bacteriophage-Induced Modifications of Host RNA Polymerase
-
DOI 10.1146/annurev.micro.57.030502.090942
-
Nechaev S., and Severinov K. Bacteriophage-induced modifications of host RNA polymerase Annu. Rev. Microbiol. 57 2003 301 322 (Pubitemid 37392945)
-
(2003)
Annual Review of Microbiology
, vol.57
, pp. 301-322
-
-
Nechaev, S.1
Severinov, K.2
-
2
-
-
45449099933
-
Advances in bacterial promoter recognition and its control by factors that do not bind DNA
-
DOI 10.1038/nrmicro1912, PII NRMICRO1912
-
Haugen S.P., Ross W., and Gourse R.L. Advances in bacterial promoter recognition and its control by factors that do not bind DNA Nat. Rev., Microbiol. 6 2008 507 519 (Pubitemid 351850975)
-
(2008)
Nature Reviews Microbiology
, vol.6
, Issue.7
, pp. 507-519
-
-
Haugen, S.P.1
Ross, W.2
Gourse, R.L.3
-
3
-
-
21844441735
-
The T7 group
-
R.L. Calendar, Oxford University Press New York, NY
-
Molineux I.J. The T7 group R.L. Calendar, The Bacteriophages, Second Edition 2005 Oxford University Press New York, NY 277 301
-
(2005)
The Bacteriophages, Second Edition
, pp. 277-301
-
-
Molineux, I.J.1
-
4
-
-
0016837338
-
Inactive complex formation between E. coli RNA polymerase and inhibitor protein purified from T7 phage infected cells
-
Hessellbach B., and Nakada D. Inactive complex formation between E. coli RNA polymerase and inhibitor protein purified from T7 phage infected cells Nature 258 1975 354 357
-
(1975)
Nature
, vol.258
, pp. 354-357
-
-
Hessellbach, B.1
Nakada, D.2
-
5
-
-
0033022148
-
Inhibition of Escherichia coli RNA polymerase by bacteriophage T7 gene 2 protein
-
DOI 10.1006/jmbi.1999.2782
-
Nechaev S., and Severinov K. Inhibition of Escherichia coli RNA polymerase by bacteriophage T7 gene 2 protein J. Mol. Biol. 289 1999 815 826 (Pubitemid 29306651)
-
(1999)
Journal of Molecular Biology
, vol.289
, Issue.4
, pp. 815-826
-
-
Nechaev, S.1
Severinov, K.2
-
6
-
-
79952735390
-
Inhibition of Escherichia coli RNAp by T7 Gp2 protein: Role of negatively charged strip of amino acid residues in Gp2
-
Sheppard C., Cámara B., Shadrin A., Akulenko N., Liu M., and Baldwin G. Inhibition of Escherichia coli RNAp by T7 Gp2 protein: role of negatively charged strip of amino acid residues in Gp2 J. Mol. Biol. 407 2011 623 632
-
(2011)
J. Mol. Biol.
, vol.407
, pp. 623-632
-
-
Sheppard, C.1
Cámara, B.2
Shadrin, A.3
Akulenko, N.4
Liu, M.5
Baldwin, G.6
-
7
-
-
37349072830
-
Inadequate inhibition of host RNA polymerase restricts T7 bacteriophage growth on hosts overexpressing udk
-
DOI 10.1111/j.1365-2958.2007.06058.x
-
Qimron U., Kulczyk A., Hamdan S., Tabor S., and Richardson C. Inadequate inhibition of host RNA polymerase restricts T7 bacteriophage growth on hosts overexpressing udk Mol. Microbiol. 67 2007 448 457 (Pubitemid 350295845)
-
(2008)
Molecular Microbiology
, vol.67
, Issue.2
, pp. 448-457
-
-
Qimron, U.1
Kulczyk, A.W.2
Hamdan, S.M.3
Tabor, S.4
Richardson, C.C.5
-
8
-
-
77956174950
-
The role of the T7 Gp2 inhibitor of host RNA polymerase in phage development
-
Savalia D., Robins W., Nechaev S., Molineux I., and Severinov K. The role of the T7 Gp2 inhibitor of host RNA polymerase in phage development J. Mol. Biol. 402 2010 118 126
-
(2010)
J. Mol. Biol.
, vol.402
, pp. 118-126
-
-
Savalia, D.1
Robins, W.2
Nechaev, S.3
Molineux, I.4
Severinov, K.5
-
9
-
-
0037020252
-
The downstream DNA jaw of bacterial RNA polymerase facilitates both transcriptional initiation and pausing
-
Ederth J., Artsimovitch I., Isaksson L.A., and Landick R. The downstream DNA jaw of bacterial RNA polymerase facilitates both transcriptional initiation and pausing J. Biol. Chem. 277 2002 37456 37463
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 37456-37463
-
-
Ederth, J.1
Artsimovitch, I.2
Isaksson, L.A.3
Landick, R.4
-
10
-
-
76649129579
-
T7 phage protein Gp2 inhibits the Escherichia coli RNA polymerase by antagonizing stable DNA strand separation near the transcription start site
-
Camara B., Liu M., Reynolds J., Shadrin A., Liu B., and Kwok K. T7 phage protein Gp2 inhibits the Escherichia coli RNA polymerase by antagonizing stable DNA strand separation near the transcription start site Proc. Natl Acad. Sci. USA 107 2010 2247 2252
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, pp. 2247-2252
-
-
Camara, B.1
Liu, M.2
Reynolds, J.3
Shadrin, A.4
Liu, B.5
Kwok, K.6
-
12
-
-
0032544080
-
Identification of an UP element consensus sequence for bacterial promoters
-
DOI 10.1073/pnas.95.17.9761
-
Estrem S.T., Gaal T., Ross W., and Gourse R.L. Identification of an UP element consensus sequence for bacterial promoters Proc. Natl Acad. Sci. USA 95 1998 9761 9766 (Pubitemid 28415243)
-
(1998)
Proceedings of the National Academy of Sciences of the United States of America
, vol.95
, Issue.17
, pp. 9761-9766
-
-
Estrem, S.T.1
Gaal, T.2
Ross, W.3
Gourse, R.L.4
-
14
-
-
79959360447
-
A critical role of downstream RNA polymerase-promoter interactions in the formation of initiation complex
-
Mekler V., Minakhin L., and Severinov K. A critical role of downstream RNA polymerase-promoter interactions in the formation of initiation complex J. Biol. Chem. 286 2011 22600 22608
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 22600-22608
-
-
Mekler, V.1
Minakhin, L.2
Severinov, K.3
-
15
-
-
0030915128
-
Promoter recognition as measured by binding of polymerase to nontemplate strand oligonucleotide
-
DOI 10.1126/science.276.5316.1258
-
Marr M.T., and Roberts J.W. Promoter recognition as measured by binding of polymerase to nontemplate strand oligonucleotide Science 276 1997 1258 1260 (Pubitemid 27227364)
-
(1997)
Science
, vol.276
, Issue.5316
, pp. 1258-1260
-
-
Marr, M.T.1
Roberts, J.W.2
-
16
-
-
0030589041
-
70 subunit
-
DOI 10.1006/jmbi.1996.0604
-
70 subunit J. Mol. Biol. 263 1996 637 647 (Pubitemid 26395056)
-
(1996)
Journal of Molecular Biology
, vol.263
, Issue.5
, pp. 637-647
-
-
Severinova, E.1
Severinov, K.2
Fenyo, D.3
Marr, M.4
Brody, E.N.5
Roberts, J.W.6
Chait, B.T.7
Darst, S.A.8
-
17
-
-
0037007149
-
Conformational flexibility of bacterial RNA polymerase
-
DOI 10.1073/pnas.052054099
-
Darst S.A., Opalka N., Chacon P., Polyakov A., Richter C., Zhang G., and Wriggers W. Conformational flexibility of bacterial RNA polymerase Proc. Natl Acad. Sci. USA 99 2002 4296 4301 (Pubitemid 34285979)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.7
, pp. 4296-4301
-
-
Darst, S.A.1
Opalka, N.2
Chacon, P.3
Polyakov, A.4
Richter, C.5
Zhang, G.6
Wriggers, W.7
-
18
-
-
53549085430
-
The RNA polymerase "switch region" is a target for inhibitors
-
Mukhopadhyay J., Das K., Ismail S., Koppstein D., Jang M., and Hudson B. The RNA polymerase "switch region" is a target for inhibitors Cell 135 2008 295 307
-
(2008)
Cell
, vol.135
, pp. 295-307
-
-
Mukhopadhyay, J.1
Das, K.2
Ismail, S.3
Koppstein, D.4
Jang, M.5
Hudson, B.6
-
19
-
-
18344371347
-
Structural organization of bacterial RNA polymerase holoenzyme and the RNA polymerase-promoter open complex
-
DOI 10.1016/S0092-8674(02)00667-0
-
Mekler V., Kortkhonjia E., Mukhopadhyay J., Knight J., Revyakin A., and Kapanidis A.N. Structural organization of bacterial RNA polymerase holoenzyme and the RNA polymerase promoter open complex Cell 108 2002 599 614 (Pubitemid 34241422)
-
(2002)
Cell
, vol.108
, Issue.5
, pp. 599-614
-
-
Mekler, V.1
Kortkhonjia, E.2
Mukhopadhyay, J.3
Knight, J.4
Revyakin, A.5
Kapanidis, A.N.6
Niu, W.7
Ebright, Y.W.8
Levy, R.9
Ebright, R.H.10
-
20
-
-
0037123659
-
Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution
-
DOI 10.1126/science.1069594
-
Murakami K.S., Masuda S., and Darst S.A. Structural basis of transcription initiation: an RNA polymerase holoenzyme initiation: RNA polymerase holoenzyme at 4 Å resolution Science 296 2002 1280 1284 (Pubitemid 34522777)
-
(2002)
Science
, vol.296
, Issue.5571
, pp. 1280-1284
-
-
Murakami, K.S.1
Masuda, S.2
Darst, S.A.3
-
22
-
-
58249100113
-
Transcription inactivation through local refolding of the RNA polymerase structure
-
Belogurov G.A., Vassylyeva M.N., Sevostyanova A., Appleman J.R., Xiang A.X., and Lira R. Transcription inactivation through local refolding of the RNA polymerase structure Nature 457 2009 332 335
-
(2009)
Nature
, vol.457
, pp. 332-335
-
-
Belogurov, G.A.1
Vassylyeva, M.N.2
Sevostyanova, A.3
Appleman, J.R.4
Xiang, A.X.5
Lira, R.6
-
24
-
-
58849139777
-
Allosteric control of Escherichia coli rRNA promoter complexes by DksA
-
Rutherford S.T., Villers C.L., Lee J.H., Ross W., and Gourse R.L. Allosteric control of Escherichia coli rRNA promoter complexes by DksA Genes Dev. 23 2009 236 248
-
(2009)
Genes Dev.
, vol.23
, pp. 236-248
-
-
Rutherford, S.T.1
Villers, C.L.2
Lee, J.H.3
Ross, W.4
Gourse, R.L.5
-
26
-
-
16344376192
-
Real-time characterization of intermediates in the pathway to open complex formation by Escherichia coli RNA polymerase at the T7A1 promoter
-
DOI 10.1073/pnas.0408218102
-
Sclavi B., Zaychikov E., Rogozina A., Walther F., Buckle M., and Heumann H. Real-time characterization of intermediates in the pathway to open complex formation by Escherichia coli RNA polymerase at the T7A1 promoter Proc. Natl Acad. Sci. USA 102 2005 4706 4711 (Pubitemid 40471518)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.13
, pp. 4706-4711
-
-
Sclavi, B.1
Zaychikov, E.2
Rogozina, A.3
Walther, F.4
Buckle, M.5
Heumann, H.6
-
27
-
-
79959368804
-
Mechanism of bacterial transcription initiation: RNA polymerase-promoter binding, isomerization to initiation-competent open complexes, and initiation of RNA synthesis
-
Saecker R.M., Record M.T. Jr, and Dehaseth P.L. Mechanism of bacterial transcription initiation: RNA polymerase-promoter binding, isomerization to initiation-competent open complexes, and initiation of RNA synthesis J. Mol. Biol. 412 2011 754 771
-
(2011)
J. Mol. Biol.
, vol.412
, pp. 754-771
-
-
Saecker, R.M.1
Record, Jr.M.T.2
Dehaseth, P.L.3
|