Metagenome of the gut of a malnourished child

Gut Pathogens

Volumn 3, Issue 1, 2011, Pages

  Gupta, Sourav ^a   Mohammed, Monzoorul ^b   Ghosh, Tarini ^b   Kanungo, Suman ^a   Nair, Gopinath ^a   Mande, Sharmila S ^b  

^a NATIONAL INSTITUTE OF CHOLERA AND ENTERIC DISEASES   (India)

^b TATA CONSULTANCY SERVICES   (India)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 80755155823     PISSN: None     EISSN: 17574749     Source Type: Journal    
DOI: 10.1186/1757-4749-3-7     Document Type: Article

References (17)

1. Improving the performance of enteric vaccines in the developing world. Serazin AC, Shackelton LA, Wilson C, Bhan MK, Nat. Immunol 2010 11 769 73 10.1038/ni0910-769 20720580
2. Maternal and child undernutrition: global and regional exposures and health consequences. Black RE, et al. Lancet 2008 371 243 260 10.1016/S0140-6736(07)61690-0 18207566
3. Probiotics and prebiotics for severe acute malnutrition (PRONUT study): a double-blind efficacy randomised controlled trial in Malawi. Kerac M, et al. Lancet 2009 374 136 144 10.1016/S0140-6736(09)60884-9 19595348
4. Use of metagenomics to understand the genetic basis of malnutrition. Ahmed T, Haque R, Shamsir Ahmed AM, Petri WA Jr, Cravioto A, Nutr. Rev 2009 67 201 206
5. SPHINX-an algorithm for taxonomic binning of metagenomic sequences. Mohammed MH, Ghosh TS, Singh NK, Mande SS, Bioinformatics 2011 27 22 30 10.1093/bioinformatics/btq608 21030462
6. Diarrhea and malnutrition. Brown KH, J. Nutr 2003 133 328 332
7. Impact of infection by Helicobacter pylori on the risk and severity of endemic cholera. Clemens J, et al. J. Infect. Dis 1995 171 1653 1656 10.1093/infdis/171.6.1653 7769312
8. Helicobacter pylori and epidemic Vibrio cholerae O1 infection in Peru. Shahinian ML, et al. Lancet 2000 355 377 378 10.1016/S0140-6736(99)05143-0 10665561
9. Cholera, non-vibrio cholera, and stomach acid. Nalin DR, et al. Lancet 2 1978 856 859
10. A core gut microbiome in obese and lean twins. Turnbaugh PJ, et al. Nature 2009 457 480 484 10.1038/nature07540 19043404
11. Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach. Manichanh C, et al. Gut 2006 55 205 211 10.1136/gut.2005.073817 16188921 (Pubitemid 43117279)
12. The Metagenomics RAST server-A public resource for the automatic phylogenetic and functional analysis of metagenomes. Meyer F, et al. BMC Bioinformatics 2008 9 386 10.1186/1471-2105-9-386 18803844
13. A role for tungsten in the biology of Campylobacter jejuni: tungstate stimulates formate dehydrogenase activity and is transported via an ultra-high affinity ABC system distinct from the molybdate transporter. Smart JP, Cliff MJ, Kelly DJ, Mol. Microbiol 2009 74 742 57 10.1111/j.1365-2958.2009.06902.x 19818021
14. The molybdate-binding protein (ModA) of the plant pathogen Xanthomonas axonopodis pv. Citri. Balan A, et al. Protein Expr. Purif 2006 50 215 222 10.1016/j.pep.2006.06.014 16879982 (Pubitemid 44716707)
15. SciN is an outer membrane lipoprotein required for type VI secretion in enteroaggregative Escherichia coli. Aschtgen MS, Bernard CS, De Bentzmann S, Lloubès R, Cascales E, J. Bacteriol 2008 190 7523 7531 10.1128/JB.00945-08 18805985
16. Identification and functional characterization of gene components of Type VI Secretion system in bacterial genomes. Shrivastava S, Mande SS, PLoS One 2008 3 2955 10.1371/journal.pone.0002955 18698408
17. The bacterial type VI secretion machine: yet another player for protein transport across membranes. Filloux A, Hachani A, Bleves S, Microbiology 2008 154 1570 1583 10.1099/mic.0.2008/016840-0 18524912