Genome Sequence of Rhodococcus erythropolis XP, a Biodesulfurizing Bacterium with Industrial Potential

Journal of Bacteriology

Volumn 193, Issue 22, 2011, Pages 6422-6423

  Tao, Fei ^a   Zhao, Peng ^b   Li, Qian ^b   Su, Fei ^a   Yu, Bo ^c   Ma, Cuiqing ^b   Tang, Hongzhi ^a   Tai, Cui ^a   Wu, Geng ^a   Xu, Ping ^a  

^a Shanghai Jiao Tong University   (China)

^b SHANDONG UNIVERSITY   (China)

^c INSTITUTE OF MICROBIOLOGY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; FLAVIN REDUCTASE; OXIDOREDUCTASE; PROTEIN DSZA; PROTEIN DSZB; PROTEIN DSZC; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL CHROMOSOME; BACTERIAL GENE; BACTERIAL GENOME; BACTERIAL STRAIN; GENE LOCATION; GENE SEQUENCE; NONHUMAN; NUCLEOTIDE SEQUENCE; PLASMID; PRIORITY JOURNAL; RHODOCOCCUS ERYTHROPOLIS;

BACTERIAL PROTEINS; BASE SEQUENCE; GENOME, BACTERIAL; INDUSTRIAL MICROBIOLOGY; MOLECULAR SEQUENCE DATA; RHODOCOCCUS; SULFUR;

BACTERIA (MICROORGANISMS); RHODOCOCCUS ERYTHROPOLIS;

EID: 80655128427     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.06154-11     Document Type: Article

References (13)

1. Aziz, R. K., et al. 2008. The RAST server: rapid annotations using subsystems technology. BMC Genomics 9:75.
2. Gallagher, J. R., E. S. Olson, and D. C. Stanley. 1993. Microbial desulfurization of dibenzothiophene: a sulfur-specific pathway. FEMS Microbiol. Lett. 107:31-35.
3. Gordon, D., C. Abajian, and P. Green. 1998. Consed: a graphical tool for sequence finishing. Genome Res. 8:195-202.
4. Gray, K. A., et al. 1996. Molecular mechanisms of biocatalytic desulfurization of fossil fuels. Nat. Biotechnol. 14:1705-1709.
5. Kilbane, J. J., II. 2006. Microbial biocatalyst developments to upgrade fossil fuels. Curr. Opin. Biotechnol. 17:305-314.
6. Kilbane, J. J., II, and K. Jackowski. 1992. Biodesulfurization of water-soluble coal-derived material by Rhodococcus rhodochrous IGTS8. Biotechnol. Bioeng. 40:1107-1114.
7. Peng, F., Z. Liu, L. Wang, and Z. Shao. 2007. An oil-degrading bacterium: Rhodococcus erythropolis strain 3C-9 and its biosurfactants. J. Appl. Microbiol. 102:1603-1611.
8. Xu, P., J. Feng, B. Yu, F. Li, and C. Ma. 2009. Recent developments in biodesulfurization of fossil fuels. Adv. Biochem. Eng. Biotechnol. 113:255-274.
9. Xu, P., B. Yu, F. L. Li, X. F. Cai, and C. Q. Ma. 2006. Microbial degradation of sulfur, nitrogen and oxygen heterocycles. Trends Microbiol. 14:398-405.
10. Yu, B., et al. 2006. Microbial desulfurization of gasoline by free whole-cells of Rhodococcus erythropolis XP. FEMS Microbiol. Lett. 258:284-289.
11. Yu, B., et al. 2006. Simultaneous biodetoxification of S, N, and O pollutants by engineering of a carbazole-degrading gene cassette in a recombinant biocatalyst. Appl. Environ. Microbiol. 72:7373-7376.
12. Yu, B., P. Xu, Q. Shi, and C. Ma. 2006. Deep desulfurization of diesel oil and crude oils by a newly isolated Rhodococcus erythropolis strain. Appl. Environ. Microbiol. 72:54-58.
13. Zerbino, D. R., and E. Birney. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829.