Nanoelectrospray-MS n of Native and Permethylated Glycans

Methods in Molecular Biology

Volumn 790, Issue , 2011, Pages 71-85

  Bleckmann, Christina ^a   Geyer, Hildegard ^a   Geyer, Rudolf ^a  

^a JUSTUS LIEBIG UNIVERSITY   (Germany)

Author keywords

Carbohydrate analysis; Electrospray ionization; Glycosylation; MS(n) fragmentation; Permethylation; Tandem mass spectrometry

Indexed keywords

CARBOHYDRATE ANALYSIS; ELECTROSPRAY; GLYCOSYLATION; METHYLATION; SOFTWARE; TANDEM MASS SPECTROMETRY; WORKFLOW; ARTICLE; CHEMISTRY; ELECTROSPRAY MASS SPECTROMETRY; ISOLATION AND PURIFICATION; METABOLISM; METHODOLOGY; NANOTECHNOLOGY; STATISTICAL ANALYSIS;

GLYCOLIPID; POLYSACCHARIDE;

DATA INTERPRETATION, STATISTICAL; GLYCOLIPIDS; METHYLATION; NANOTECHNOLOGY; POLYSACCHARIDES; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION;

EID: 80555144825     PISSN: 10643745     EISSN: 19406029     Source Type: Book Series    
DOI: 10.1007/978-1-61779-319-6_6     Document Type: Chapter

References (18)

1. Hanneman, A.J., Rosa, J.C., Ashline, D., et al. (2006) Isomer and glycomer complexities of core GlcNAcs in Caenorhabditis elegans. Glycobiology 16, 874–890.
2. Prien, J.M., Ashline, D.J., Lapadula, A.J., et al. (2009) The high mannose glycans from bovine ribonuclease B isomer characterization by ion trap MS. J Am Soc Mass Spectrom 20, 539–556.
3. Prien, J.M., Prater, B.D., Cockrill, S.L. (2010) A multi-method approach toward de novo glycan characterization: a Man-5 case study. Glycobiology 20, 629–647.
4. n. Glycobiology 19, 756–766.
5. Stalnaker, S.H., Hashmi, S., Lim, J.M., et al. (2010) Site-mapping and characterization of O-glycan structures on dystroglycan isolated from rabbit skeletal muscle. J Biol Chem 285, 24882–24891.
6. Bleckmann, C., Geyer, H., Lieberoth, A., et al. (2009) O-glycosylation pattern of CD24 from mouse brain. Biol Chem 390, 627–645.
7. Bleckmann, C., Geyer, H., Reinhold, V., et al. (2009) Glycomic analysis of N-linked carbohydrate epitopes from CD24 of mouse brain. J Proteome Res 8, 567–582.
8. Domon, B., Costello, C. (1988) A systematic nomenclature for carbohydrate fragmentation in FAB-MS/MS spectra of glycoconjugates. Glycoconjugate J 5, 253–257.
9. Consortium for Functional Glycomics (CFG) nature functional glycomics gateway [Internet]. London (England); Nature Publishing Group; c2010, [updated 2007, Apr 5; cited 2010, Aug 4]. ISSN 1752-184X. Available from: http://www.functionalglycomics.org/static/consor-tium/consortium.shtml.
10. Maass, K., Ranzinger, R., Geyer, H., et al. (2007) “Glyco-peakfinder” – de novo composition analysis of glycoconjugates. Proteomics 7, 4435–4444.
11. Ceroni, A., Maass, K., Geyer, H., et al. (2008) GlycoWorkbench: a tool for the computer-assisted annotation of mass spectra of glycans. J Proteome Res 7, 1650–1659.
12. Endo, M., Hase, S., Yamamoto, K., et al. (2006) Endoglycosidases: Biochemistry, Biotechnology, Application. Kodansha Ltd., Tokyo, Japan.
13. Yu, S.Y., Wu, S.W., Hsiao, H.H., et al. (2009) Enabling techniques and strategic workflow for sulfoglycomics based on mass spectrometry mapping and sequencing of permethylated sul-fated glycans. Glycobiology 19, 1136–1149.
14. EuroCarbDB--Applications--Tools to analyze MS spectra [Internet]. 6th Research Framework Program of European Union; [updated 2004, Nov 11; cited 2010, Aug 5] (Contract: RIDS Contract number 011952); Available from: http://www.eurocarbdb.org/applications/ms-tools.
15. Friedl, C.H., Lochnit, G., Geyer, R., et al. (2000) Structural elucidation of zwitterionic sugar cores from glycosphingolipids by nano-electrospray ionization-ion-trap mass spectrometry. Anal Biochem 284, 279–287.
16. Garozzo, D., Impallomeni, G., Spina, E., et al. (1991) Linkage analysis in disaccharides by electrospray mass spectrometry. Carbohydr Res 221, 253–257.
17. Pfenninger, A., Karas, M., Finke, B., et al. (2002) Structural analysis of underivatized neutral human milk oligosaccharides in the negative ion mode by nano-electrospray MS(n) (part 1: methodology). J Am Soc Mass Spectrom 13, 1331–1340.
18. Pfenninger, A., Karas, M., Finke, B., et al. (2002) Structural analysis of underivatized neutral human milk oligosaccharides in the negative ion mode by nano-electrospray MS(n) (part 2: application to isomeric mixtures). J Am Soc Mass Spectrom 13, 1341–1348.