Detection and genetic characterization of a novel pig astrovirus: Relationship to other astroviruses

Archives of Virology

Volumn 156, Issue 11, 2011, Pages 2095-2099

  Laurin, Marc André ^a   Dastor, Margaux ^a   L'Homme, Yvan ^a,b  

^a CANADIAN FOOD INSPECTION AGENCY   (Canada)

^b UNIVERSITÉ DE MONTRÉAL   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; ANIMAL DISEASE; ARTICLE; ASTROVIRUS; ASTROVIRUS INFECTION; CLASSIFICATION; GENETIC VARIABILITY; GENETICS; HUMAN; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; PHYLOGENY; SWINE; SWINE DISEASE; VIROLOGY;

ANIMALS; ASTROVIRIDAE; ASTROVIRIDAE INFECTIONS; GENETIC VARIATION; HUMANS; MOLECULAR SEQUENCE DATA; PHYLOGENY; SUS SCROFA; SWINE; SWINE DISEASES;

ANIMALIA; ASTROVIRIDAE; HENIPAVIRUS; MAMASTROVIRUS; PORCINE ASTROVIRUS; SUIDAE;

EID: 80255123828     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-011-1088-7     Document Type: Article

References (28)

1. Akihara S, Phan TG, Nguyen TA, Hansman G, Okitsu S, Ushijima H (2005) Existence of multiple outbreaks of viral gastroenteritis among infants in a day care center in Japan. Arch Virol 150: 2061-2075.
2. Atkins A, Wellehan JF Jr, Childress AL, Archer LL, Fraser WA, Citino SB (2009) Characterization of an outbreak of astroviral diarrhea in a group of cheetahs (Acinonyx jubatus). Vet Microbiol 136: 160-165.
3. Bridger JC (1980) Detection by electron microscopy of caliciviruses, astroviruses and rotavirus-like particles in the faeces of piglets with diarrhoea. Vet Rec 107: 532-533.
4. Chu DK, Chin AW, Smith GJ, Chan KH, Guan Y, Peiris JS, Poon LL (2010) Detection of novel astroviruses in urban brown rats and previously known astroviruses in humans. J Gen Virol 91: 2457-2462.
5. Chu DK, Poon LL, Guan Y, Peiris JS (2008) Novel astroviruses in insectivorous bats. J Virol 82: 9107-9114.
6. Dennehy PH, Nelson SM, Spangenberger S, Noel JS, Monroe SS, Glass RI (2001) A prospective case-control study of the role of astrovirus in acute diarrhea among hospitalized young children. J Infect Dis 184: 10-15.
7. Finkbeiner SR, Holtz LR, Jiang Y, Rajendran P, Franz CJ, Zhao G, Kang G, Wang D (2009) Human stool contains a previously unrecognized diversity of novel astroviruses. Virol J 6: 161.
8. Finkbeiner SR, Kirkwood CD, Wang D (2008) Complete genome sequence of a highly divergent astrovirus isolated from a child with acute diarrhea. Virol J 5: 117.
9. Finkbeiner SR, Le BM, Holtz LR, Storch GA, Wang D (2009) Detection of newly described astrovirus MLB1 in stool samples from children. Emerg Infect Dis 15: 441-444.
10. Finkbeiner SR, Li Y, Ruone S, Conrardy C, Gregoricus N, Toney D, Virgin HW, Anderson LJ, Vinje J, Wang D, Tong S (2009) Identification of a novel astrovirus (astrovirus VA1) associated with an outbreak of acute gastroenteritis. J Virol 83: 10836-10839.
11. Gallimore CI, Taylor C, Gennery AR, Cant AJ, Galloway A, Iturriza-Gomara M, Gray JJ (2006) Environmental monitoring for gastroenteric viruses in a pediatric primary immunodeficiency unit. J Clin Microbiol 44: 395-399.
12. Gray JJ, Wreghitt TG, Cubitt WD, Elliot PR (1987) An outbreak of gastroenteritis in a home for the elderly associated with astrovirus type 1 and human calicivirus. J Med Virol 23: 377-381.
13. Indik S, Valicek L, Smid B, Dvorakova H, Rodak L (2006) Isolation and partial characterization of a novel porcine astrovirus. Vet Microbiol 117: 276-283.
14. Jonassen CM, Jonassen TO, Saif YM, Snodgrass DR, Ushijima H, Shimizu M, Grinde B (2001) Comparison of capsid sequences from human and animal astroviruses. J Gen Virol 82: 1061-1067.
15. Kapoor A, Li L, Victoria J, Oderinde B, Mason C, Pandey P, Zaidi SZ, Delwart E (2009) Multiple novel astrovirus species in human stool. J Gen Virol 90: 2965-2972.
16. Kozak M (1991) Structural features in eukaryotic mRNAs that modulate the initiation of translation. J Biol Chem 266: 19867-19870.
17. Luo Z, Roi S, Dastor M, Gallice E, Laurin MA, L'homme Y (2011) Multiple novel and prevalent astroviruses in pigs. Vet Microbiol 149: 316-323.
18. Mendez E, Arias CF (2007) Astroviruses. In: Knipe DM, Howley PM (eds) Fields virology. Lippincott Williams & Wilkins, Philadelphia, pp 981-1000.
19. Monroe SS (2005) Astroviridae. In: Carter MJ, Herrmann J, Mitchel JK Sanchez-Fauquier A (eds) Virus taxonomy. Eighth report of the International Committee on Taxonomy of Viruses. Elsevier, Amsterdam, pp 859-864.
20. Reuter G, Pankovics P, Boros A (2011) Identification of a novel astrovirus in a domestic pig in Hungary. Arch Virol 156: 125-128.
21. Rivera R, Nollens HH, Venn-Watson S, Gulland FM, Wellehan JF Jr (2010) Characterization of phylogenetically diverse astroviruses of marine mammals. J Gen Virol 91: 166-173.
22. Scotto-Lavino E, Du G, Frohman MA (2006) 3′ end cDNA amplification using classic RACE. Nat Protoc 1: 2742-2745.
23. Shimizu M, Shirai J, Narita M, Yamane T (1990) Cytopathic astrovirus isolated from porcine acute gastroenteritis in an established cell line derived from porcine embryonic kidney. J Clin Microbiol 28: 201-206.
24. Smits SL, van LM, Kuiken T, Hammer AS, Simon JH, Osterhaus AD (2010) Identification and characterization of deer astroviruses. J Gen Virol 91: 2719-2722.
25. Toffan A, Jonassen CM, De BC, Schiavon E, Kofstad T, Capua I, Cattoli G (2009) Genetic characterization of a new astrovirus detected in dogs suffering from diarrhoea. Vet Microbiol 139: 147-152.
26. Tse H, Chan WM, Tsoi HW, Fan RY, Lau CC, Lau SK, Woo PC, Yuen KY (2011) Re-discovery and genomic characterization of bovine astroviruses. J Gen Virol 92(Pt 8): 1888-1898.
27. Zhu AL, Zhao W, Yin H, Shan TL, Zhu CX, Yang X, Hua XG, Cui L (2011) Isolation and characterization of canine astrovirus in China. Arch Virol 156(9): 1671-1675.
28. Zhu HC, Chu DK, Liu W, Dong BQ, Zhang SY, Zhang JX, Li LF, Vijaykrishna D, Smith GJ, Chen HL, Poon LL, Peiris JS, Guan Y (2009) Detection of diverse astroviruses from bats in China. J Gen Virol 90: 883-887.