Characterization of genes Rpp2, Rpp4, and Rpp5 for resistance to soybean rust

Euphytica

Volumn 182, Issue 1, 2011, Pages 53-64

  Lemos, Noelle Giacomini ^a,b   de e Braccini, Alessandro Lucca ^b   Abdelnoor, Ricardo Vilela ^c   de Oliveira, Maria Cristina Neves ^c   Suenaga, Kazuhiro ^a   Yamanaka, Naoki ^a  

^a JAPAN INTERNATIONAL RESEARCH CENTER FOR AGRICULTURAL SCIENCES   (Japan)

^b STATE UNIVERSITY OF MARINGÁ   (Brazil)

^c EMBRAPA CERRADOS   (Brazil)

Author keywords

Asian rust; Composite interval mapping; Phakopsora pachyrhizi; Resistance genes

Indexed keywords

FUNGI; GLYCINE MAX; PHAKOPSORA PACHYRHIZI;

EID: 80255123780     PISSN: 00142336     EISSN: 15735060     Source Type: Journal    
DOI: 10.1007/s10681-011-0465-3     Document Type: Article

References (40)

1. Arias CAA, Toledo JFF, Almeida LA et al (2008) Asian rust in Brazil: varietal resistance. In: Kudo H et al (eds) JIRCAS working rep no. 58: facing the challenge of soybean rust in South America. Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, pp 29-30.
2. Bonde MR, Nester SE, Austin CN, Stone CL, Frederick RD, Hartman GL, Miles MR (2006) Evaluation of virulence of Phakopsora pachyrhizi and P. meibomiae isolates. Plant Dis 90: 708-716.
3. Bromfield KR, Hartwig EE (1980) Resistance to soybean rust and mode of inheritance. Crop Sci 20: 254-255.
4. Castro AJ, Chen X, Hayes PM, Johnston M (2003) Pyramiding quantitative trait locus (QTL) alleles determining resistance to barley stripe rust: effects on resistance at the seedling stage. Crop Sci 43: 651-659.
5. Collard BCY, Mackill DJ (2008) Marker-assisted selection: an approach for precision plant breeding in the twenty-first century. Phil Trans R Soc B 363: 557-572.
6. Cregan PB, Jarvik T, Bush AL et al (1999) An integrated genetic linkage map of the soybean genome. Crop Sci 39: 1464-1490.
7. Draper NR, Smith H (1966) Applied regression analysis. Wiley, New York.
8. Fehr WR, Caviness CE, Burnood DT, Pennington JS (1971) Stage of development descriptions for soybeans, Glycine max (L.) Merril. Crop Sci 11: 929-931.
9. Garcia A, Calvo ES, Kiihl RAS, Haranda A, Hiromoto DM, Vieira LGE (2008) Molecular mapping of soybean rust (Phakopsora pachyrhizi) resistance genes: discovery of a novel locus and alleles. Theor Appl Genet 117: 545-553.
10. Garcia A, Calvo ES, Kiihl RAS, Souto ER (2011) Evidence of a susceptible allele inverting the dominance of rust resistance in soybean. Crop Sci 51: 32-40.
11. Grant D, Nelson RT, Cannon SB, Shoemaker RC (2010) SoyBase, the USDA-ARS soybean genetics and genomics database. Nucleic Acids Res 38: 843-846.
12. Hartwig EE (1986) Identification of a 4th major gene conferring resistance to soybean rust. Crop Sci 26: 1135-1136.
13. Hartwig EE, Bromfield KR (1983) Relationships among 3 genes conferring specific resistance to rust in soybeans. Crop Sci 23: 237-239.
14. Hwang TY, Sayama T, Takahashi M et al (2009) High-density integrated linkage map based on SSR markers in soybean. DNA Res 16: 213-225.
15. Hyten DL, Hartman GL, Nelson RL et al (2007) Map location of the Rpp1 locus that confers resistance to soybean rust in soybean. Crop Sci 47: 837-840.
16. Hyten DL, Smith JR, Frederick RD, Tucker ML, Song Q, Cregan PB (2009) Bulked segregant analysis using the GoldenGate assay to locate the Rpp3 locus that confers resistance to soybean rust in soybean. Crop Sci 49: 265-271.
17. Kato M, Yorinori JT (2008) A study on race composition of Phakopsora pachyrhizi in Brazil: a difficulty of race identification. In: Kudo H et al (eds) JIRCAS working rep no. 58: facing the challenge of soybean rust in South America. Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, pp 94-98.
18. Kolmer JA (1996) Genetics of resistance to wheat leaf rust. Annu Rev Phytopathol 34: 435-455.
19. Kolmer JA, Dyck PL (1994) Gene expression in the Triticum aestivum-Puccinia recondita f. sp. tritici gene-for-gene system. Am Phytopathol Soc 84: 437-440.
20. Lander ES, Green P, Abrahamson J, Barlow A, Daly JM, Lincoln SE, Newberg L (1987) Mapmaker: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1: 174-181.
21. Li ZK, Sanchez A, Angeles E, Singh S, Domingo J, Huang N, Khush GS (2001) Are the dominant and recessive plant disease resistance genes similar?. A case study of rice R genes and Xanthomonas oryzae pv. oryzae races. Genetics 159: 757-765.
22. Liu J, Liu D, Tao W, Li W, Wang S, Chen P et al (2000) Molecular marker-facilitated pyramiding of different genes for powdery mildew resistance in wheat. Plant Breed 119: 21-24.
23. McLean RJ, Byth DE (1980) Inheritance of resistance to rust (Phakopsora pachyrhizi) in soybeans. Aust J Agric Res 31: 951-956.
24. Monteros MJ, Missaoui AM, Phillips DV, Walker DR, Boerma H (2007) Mapping and confirmation of the 'Hyuuga' red-brown lesion resistance gene for Asian soybean rust. Crop Sci 47: 829-836.
25. Morel PW (2001) Roya de la Soja. Comunicado Técnico - Reporte Oficial, Serie Fitopatología, 1, Junio. Ministerio de Agricultura y Ganadería, Subsecretaria de Agricultura, Dirección de Investigación Agrícola, Centro Regional de Investigación Agrícola - CRIA, Capitán Miranda, Itapúa, Paraguay.
26. Moury B, Morel C, Johansen E et al (2004) Mutations in potato virus Y genome-linked protein determine virulence toward recessive resistances in Capsicum annuum and Lycopersicum hirsutum. Mol Plant-Microbe Interact 17: 322-329.
27. Murray MG, Thompson (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res 8: 4321-4325.
28. Palloix A, Ayme V and Moury B (2009) Durability of plant major resistance genes to pathogens depends on the genetic background, experimental evidence and consequences for breeding strategies. New Phytol 183: 190-199.
29. Pierozzi PHB, Ribeiro AS, Moreira JUV et al (2008) New soybean (Glycine max Fabales, Fabaceae) sources of qualitative genetic resistance to Asian soybean rust caused by Phakopsora pachyrhizi (Uredinales, Phakopsoraceae). Gen Mol Biol 31(2): 505-511.
30. SAS INSTITUTE (2008) SAS/STAT user's guide: statistics. Version 9. 2. SAS Institute, Cary.
31. Sato S, Isobe S, Asamizu E et al (2005) Comprehensive structural analysis of the genome of red clover (Trifolium pratense L.). DNA Res 12: 301-364.
32. Shi A, Chen P, Li D, Zheng C, Zhang B, Hou A (2009) Pyramiding multiple genes for resistance to soybean mosaic virus in soybean using molecular markers. Mol Breed 23: 113-124.
33. Silva DCG, Yamanaka N, Brogin RL et al (2008) Molecular mapping of two loci that confer resistance to Asian rust in soybean. Theor Appl Genet 117: 57-63.
34. Singh S, Sidhu JS, Huang N, Vikal NY, Li Z, Brar DS et al (2001) Pyramiding three bacterial blight resistance genes (xa5, xa13, Xa21) using marker-assisted selection into indica rice cultivar PR106. Theor Appl Genet 102: 1011-1015.
35. Soares RM (2008) Practical soybean rust identification. In: Kudo H et al (eds) JIRCAS working rep no. 58: facing the challenge of soybean rust in South America. Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, pp 66-69.
36. Song QJ, Marek LF, Shoemaker RC, Lark KG, Concibido VC, Delannay X, Specht JE, Cregan PB (2004) A new integrated genetic linkage map of the soybean. Theor Appl Genet 109: 122-128.
37. Wang S, Basten CJ, Zeng ZB (2007) Windows QTL Cartographer 2. 5 Department of Statistics, North Carolina State University, Raleigh, NC, USA. http://statgen. ncsu. edu/qtlcart/WQTLCart. htm. Accessed 20 July 2009.
38. Yamanaka N, Silva DCG, Passianotto AL et al (2008) Identification of DNA markers and characterization of the genes for resistance against Asian soybean rust. In: Kudo H et al (eds) JIRCAS working rep no. 58: facing the challenge of soybean rust in South America. Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, pp 99-107.
39. Yamanaka N, Yamaoka Y, Kato M et al (2010) Development of classification criteria for resistance to soybean rust and differences in virulence among Japanese and Brazilian rust populations. Trop Plant Pathol 35: 153-162.
40. Yorinori JT (2008) Soybean germplasms with resistance and tolerance to Asian rust and screening methods. In: Kudo H et al (eds) JIRCAS working rep no. 58: facing the challenge of soybean rust in South America. Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, pp 70-87.