Path2Path: Hierarchical path-based analysis for neuron matching

Proceedings - International Symposium on Biomedical Imaging

Volumn , Issue , 2011, Pages 996-999

  Basu, Saurav ^a   Condron, Barry ^a   Acton, Scott T ^a  

^a UNIVERSITY OF VIRGINIA   (United States)

Author keywords

graph matching; morphology; neuron comparison; Neuron tracing

Indexed keywords

ACTIVE AREA; BIOLOGICAL RESEARCH; CELLULAR STRUCTURE; COMPARISON TECHNIQUES; CONNECTIVITY COMPONENTS; FUNCTIONAL CHARACTERISTICS; FUNCTIONAL CLASS; GEOMETRIC INFORMATION; GEOMETRIC SIMILARITY; GRAPH MATCHINGS; MATHEMATICAL FRAMEWORKS; PATH-BASED; PATH-MATCHING;

MEDICAL IMAGING; MORPHOLOGY; THREE DIMENSIONAL;

MATHEMATICAL MORPHOLOGY;

EID: 80055042006     PISSN: 19457928     EISSN: 19458452     Source Type: Conference Proceeding    
DOI: 10.1109/ISBI.2011.5872569     Document Type: Conference Paper

References (10)

1. C. Koch, and I. Segev, "The role of single neurons in information processing", Nat Neurosci 3 Suppl, pp. 1171-7, 2000.
2. G. A. Ascoli, D. E. Donohue, and M Halavi, "NeuroMorpho. Org: a central resource for neuronal morphologies", J Neurosci, vol 27, pp. 9247-51, 2007.
3. S. Basu, A. Aksel, B. Condron, S.T. Acton, "Tree2Tree: neuron segmentation for generation of neuronal morphology," Proc. IEEE Int. Symp. of Biomed. Imag., Rotterdam, The Netherlands, April 14-17, 2010.
4. K. A. Al-Kofahi, A. Can, S. Lasek, D. H. Szarowski, N. Dowell-Mesfin, W. Shain, J. N. Turner, and B. Roysam, "Median based robust algorithms for tracing neurons from noisy confocal microscope images", IEEE Trans. Info. Tech. in Biomedicine, vol 7, no. 4, pp 302-16, 2003.
5. H. Peng, Z. Ruan, F. Long, J. H. Simpson, E. Myers, "V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets," Nature Biotechnology, vol 28, pp. 348-353, 2010.
6. G. Chartrand, F. Saba, H. B. Zou, "Edge rotation and distance between graphs," Časopis Pěst. Mat, vol 110, pp. 87-91, 1985.
7. P. N. Klein, "Computing the Edit-Distance between Unrooted Ordered Trees," Proc. of the 6th Annual European Symposium on Algorithms, pp. 91-102, 1998.
8. R. Lee and J. Liu, "Tropical cyclone identification and tracking system using integrated neural oscillatory elastic graph matching and hybrid RBF network track mining techniques," IEEE Trans. on Neural Networks, vol 11(3), pp. 680-689, 2000.
9. P. Billingsley, Probability and Measure, John Wiley & Sons, Inc., New York, 1995.
10. P.J. Besl, H.D. McKay, "A method for registration of 3-D shapes," IEEE Trans. on PAMI., vol 14(2), pp. 239-256, 1992.