-
1
-
-
42549162084
-
Eliminating human tuberculosis in the twenty-first century
-
DOI 10.1098/rsif.2007.1138, PII N502JJ12W45R6403
-
Dye C, Williams BG. Eliminating human tuberculosis in the twenty-first century. J R Soc Interface 2008; 5: 653-62. (Pubitemid 351589747)
-
(2008)
Journal of the Royal Society Interface
, vol.5
, Issue.23
, pp. 653-662
-
-
Dye, C.1
Williams, B.G.2
-
2
-
-
0037879045
-
Molecular methods for Mycobacterium tuberculosis strain typing: A users guide
-
DOI 10.1046/j.1365-2672.2003.01918.x
-
Kanduma E, McHugh TD, Gillespie SH. Molecular methods for Mycobacterium tuberculosis strain typing: a users' guide. J Appl Microbiol 2003; 94: 781-91. (Pubitemid 36555142)
-
(2003)
Journal of Applied Microbiology
, vol.94
, Issue.5
, pp. 781-791
-
-
Kanduma, E.1
McHugh, T.D.2
Gillespie, S.H.3
-
3
-
-
0037503639
-
Genotyping of the Mycobacterium tuberculosis complex using MIRUs: Association with VNTR and spoligotyping for molecular epidemiology and evolutionary genetics
-
DOI 10.1016/S1567-1348(03)00011-X, PII S156713480300011X
-
Sola C, Filliol I, Legrand E et al. Genotyping of the Mycobacterium tuberculosis complex using MIRUs: association with VNTR and spoligotyping for molecular epidemiology and evolutionary genetics. Infect Genet Evol 2003; 3: 125-33. (Pubitemid 36686755)
-
(2003)
Infection, Genetics and Evolution
, vol.3
, Issue.2
, pp. 125-133
-
-
Sola, C.1
Filliol, I.2
Legrand, E.3
Lesjean, S.4
Locht, C.5
Supply, P.6
Rastogi, N.7
-
4
-
-
0034796701
-
Automated high-throughput genotyping for study of global epidemiology of Mycobacterium tuberculosis based on mycobacterial interspersed repetitive units
-
DOI 10.1128/JCM.39.10.3563-3571.2001
-
Supply P, Lesjean S, Savine E, Kremer K, van Soolingen D, Locht C. Automated high-throughput genotyping for study of global epidemiology of Mycobacterium tuberculosis based on mycobacterial interspersed repetitive units. J Clin Microbiol 2001; 39: 3563-71. (Pubitemid 32954502)
-
(2001)
Journal of Clinical Microbiology
, vol.39
, Issue.10
, pp. 3563-3571
-
-
Supply, P.1
Lesjean, S.2
Savine, E.3
Kremer, K.4
Van Soolingen, D.5
Locht, C.6
-
5
-
-
4344697670
-
-
National TB Controllers Association Handbook for TB Controllers, Epidemiologists, Laboratorians, and Other Program Staff (online). Atlanta, GA: US Department of Health and Human Services, CDC, June
-
National TB Controllers Association/CDC Advisory Group on Tuberculosis Genotyping. Guide to the application of genotyping to tuberculosis prevention and control. Handbook for TB Controllers, Epidemiologists, Laboratorians, and Other Program Staff (online). Atlanta, GA: US Department of Health and Human Services, CDC, June 2004 (www.cdc.gov/TB/genotyping/manual.htm).
-
(2004)
Guide to the Application of Genotyping to Tuberculosis Prevention and Control
-
-
-
6
-
-
13844276550
-
Evaluation of a two-step approach for large-scale, prospective genotyping of Mycobacterium tuberculosis isolates in the United States
-
DOI 10.1128/JCM.43.2.688-695.2005
-
Cowan LS, Diem L, Monson T. Evaluation of a two-step approach for large-scale, prospective genotyping of Mycobacterium tuberculosis isolates in the United States. J Clin Microbiol 2005; 43: 688-95. (Pubitemid 40256020)
-
(2005)
Journal of Clinical Microbiology
, vol.43
, Issue.2
, pp. 688-695
-
-
Cowan, L.S.1
Diem, L.2
Monson, T.3
Wand, P.4
Temporado, D.5
Oemig, T.V.6
Crawford, J.T.7
-
7
-
-
0035852711
-
High-resolution minisatellite-based typing as a portable approach to global analysis of Mycobacterium tuberculosis molecular epidemiology
-
DOI 10.1073/pnas.98.4.1901
-
Mazars E, Lesjean S, Banuls AL et al. High-resolution minisatellite-based typing as a portable approach to global analysis of Mycobacterium tuberculosis molecular epidemiology. Proc Nat Acad Sci USA 2001; 98: 1901-6. (Pubitemid 32165595)
-
(2001)
Proceedings of the National Academy of Sciences of the United States of America
, vol.98
, Issue.4
, pp. 1901-1906
-
-
Mazars, E.1
Lesjean, S.2
Banuls, A.-L.3
Gilbert, M.4
Vincent, V.5
Gicquel, B.6
Tibayrenc, M.7
Locht, C.8
Supply, P.9
-
8
-
-
18744388820
-
Stability of variable-number tandem repeats of mycobacterial interspersed repetitive units from 12 loci in serial isolates of Mycobacterium tuberculosis
-
DOI 10.1128/JCM.40.12.4561-4566.2002
-
Savine E, Warren RM, van der Spuy GD et al. Stability of variable-number tandem repeats of mycobacterial interspersed repetitive units from 12 loci in serial isolates of Mycobacterium tuberculosis. J Clin Microbiol 2002; 40: 4561-6. (Pubitemid 35434947)
-
(2002)
Journal of Clinical Microbiology
, vol.40
, Issue.12
, pp. 4561-4566
-
-
Savine, E.1
Warren, R.M.2
Van Der, S.G.D.3
Beyers, N.4
Van Helden, P.D.5
Locht, C.6
Supply, P.7
-
9
-
-
8644226069
-
Application of mycobacterial interspersed repetitive unit typing to Manitoba tuberculosis cases: Can restriction fragment length polymorphism be forgotten?
-
DOI 10.1128/JCM.42.11.5001-5006.2004
-
Blackwood KS, Wolfe JN, Kabani AM. Application of mycobacterial interspersed repetitive unit typing to Manitoba tuberculosis cases: can restriction fragment length polymorphism be forgotten? J Clin Microbiol 2004; 42: 5001-6. (Pubitemid 39506202)
-
(2004)
Journal of Clinical Microbiology
, vol.42
, Issue.11
, pp. 5001-5006
-
-
Blackwood, K.S.1
Wolfe, J.N.2
Kabani, A.M.3
-
10
-
-
0042023556
-
Mycobacterial interspersed repetitive unit typing of Mycobacterium tuberculosis compared to IS6110-based restriction fragment length polymorphism analysis for investigation of apparently clustered cases of tuberculosis
-
DOI 10.1128/JCM.41.8.3514-3520.2003
-
Hawkey PM, Smith EG, Evans JT et al. Mycobacterial interspersed repetitive unit typing of Mycobacterium tuberculosis compared to IS6110-based restriction fragment length polymorphism analysis for investigation of apparently clustered cases of tuberculosis. J Clin Microbiol 2003; 41: 3514-20. (Pubitemid 36994676)
-
(2003)
Journal of Clinical Microbiology
, vol.41
, Issue.8
, pp. 3514-3520
-
-
Hawkey, P.M.1
Smith, E.G.2
Evans, J.T.3
Monk, P.4
Bryan, G.5
Mohamed, H.H.6
Bardhan, M.7
Pugh, R.N.8
-
11
-
-
29144467079
-
Can 15-locus mycobacterial interspersed repetitive unit-variable-number tandem repeat analysis provide insight into the evolution of Mycobacterium tuberculosis?
-
DOI 10.1128/AEM.71.12.8207-8213.2005
-
Gibson A, Brown T, Baker L, Drobniewski F. Can 15-locus mycobacterial interspersed repetitive unit-variable-number tandem repeat analysis provide insight into the evolution of Mycobacterium tuberculosis? Appl Environ Microbiol 2005; 71 (12): 8207-13. (Pubitemid 41803946)
-
(2005)
Applied and Environmental Microbiology
, vol.71
, Issue.12
, pp. 8207-8213
-
-
Gibson, A.1
Brown, T.2
Baker, L.3
Drobniewski, F.4
-
12
-
-
33746211165
-
Progression toward an improved DNA amplification-based typing technique in the study of Mycobacterium tuberculosis epidemiology
-
DOI 10.1128/JCM.01428-05
-
Gopaul KK, Brown TJ, Gibson AL, Yates MD, Drobniewski FA. Progression toward an improved DNA amplification-based typing technique in the study of Mycobacterium tuberculosis epidemiology. J Clin Microbiol 2006; 44: 2492-8. (Pubitemid 44092417)
-
(2006)
Journal of Clinical Microbiology
, vol.44
, Issue.7
, pp. 2492-2498
-
-
Gopaul, K.K.1
Brown, T.J.2
Gibson, A.L.3
Yates, M.D.4
Drobniewski, F.A.5
-
13
-
-
0027498478
-
Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: Recommendations for a standardized methodology
-
van Embden JDA, Cave MD, Crawford JT et al. Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology. J Clin Microbiol 1993; 31: 406-9. (Pubitemid 23028649)
-
(1993)
Journal of Clinical Microbiology
, vol.31
, Issue.2
, pp. 406-409
-
-
Van Embden, J.D.A.1
Cave, M.D.2
Crawford, J.T.3
Dale, J.W.4
Eisenach, K.D.5
Gicquel, B.6
Hermans, P.7
Martin, C.8
McAdam, R.9
Shinnick, T.M.10
Small, P.M.11
-
14
-
-
85038527082
-
-
www.ncbi.nlm.nih.gov/Genbank/index.html
-
-
-
-
15
-
-
85038497390
-
-
Microsoft Windows version 7
-
Lasergene (Microsoft Windows version 7).
-
Lasergene
-
-
-
16
-
-
24744462084
-
Molecular typing of Mycobacterium tuberculosis by mycobacterial interspersed repetitive unit-variable-number tandem repeat analysis, a more accurate method for identifying epidemiological links between patients with tuberculosis
-
DOI 10.1128/JCM.43.9.4473-4479.2005
-
van Deutekom H, Supply P, de Haas PE et al. Molecular typing of Mycobacterium tuberculosis by mycobacterial interspersed repetitive unit-variable number tandem repeat analysis, a more accurate method for identifying epidemiological links between patients with tuberculosis. J Clin Microbiol 2005; 43: 4473-9. (Pubitemid 41298230)
-
(2005)
Journal of Clinical Microbiology
, vol.43
, Issue.9
, pp. 4473-4479
-
-
Van Deutekom, H.1
Supply, P.2
De Haas, P.E.W.3
Willery, E.4
Hoijng, S.P.5
Locht, C.6
Coutinho, R.A.7
Van Soolingen, D.8
-
17
-
-
85038515173
-
-
www.ncbi.nlm.nih.gov/blast/Blast.cgi.html
-
-
-
-
18
-
-
4644263023
-
Automated high-throughput mycobacterial interspersed repetitive unit typing of Mycobacterium tuberculosis strains by a combination of PCR and nondenaturing high-performance liquid chromatography
-
DOI 10.1128/JCM.42.9.4175-4180.2004
-
Evans JT, Hawkey PM, Smith EG, Boese KA, Warren RE, Hong G. Automated high-throughput mycobacterial interspersed repetitive unit typing of Mycobacterium tuberculosis strains by a combination of PCR and nondenaturing high-performance liquid chromatography. J Clin Microbiol 2004; 42: 4175-80. (Pubitemid 39296142)
-
(2004)
Journal of Clinical Microbiology
, vol.42
, Issue.9
, pp. 4175-4180
-
-
Evans, J.T.1
Hawkey, P.M.2
Smith, E.G.3
Boese, K.A.4
Warren, R.E.5
Hong, G.6
-
19
-
-
0022544449
-
Methods of multilocus enzyme electrophoresis for bacterial population genetics and systematics
-
Selander RK, Caugant DA, Ochman H, Musser JM, Gilmour MN, Whittam TS. Methods of multilocus enzyme electrophoresis for bacterial population genetics and systematics. Appl Environ Microbiol 1986; 51: 873-4.
-
(1986)
Appl Environ Microbiol
, vol.51
, pp. 873-874
-
-
Selander, R.K.1
Caugant, D.A.2
Ochman, H.3
Musser, J.M.4
Gilmour, M.N.5
Whittam, T.S.6
-
20
-
-
0023738045
-
Numerical index of the discriminatory ability of typing systems: An application of Simpson's Index of Diversity
-
Hunter PR, Gaston MA. Numerical index of the discriminatory ability of typing systems: an application of Simpson's Index of Diversity. J Clin Microbiol 1988; 26: 2465-6.
-
(1988)
J Clin Microbiol
, vol.26
, pp. 2465-2466
-
-
Hunter, P.R.1
Gaston, M.A.2
-
21
-
-
33750085449
-
Proposal for standardization of optimized mycobacterial interspersed repetitive unit-variable-number tandem repeat typing of Mycobacterium tuberculosis
-
DOI 10.1128/JCM.01392-06
-
Supply P, Allix C, Lesjean S et al. Proposal for standardization of optimized mycobacterial interspersed repetitive unit-variable number tandem repeat typing of Mycobacterium tuberculosis. J Clin Microbiol 2006; 44: 4498-510. (Pubitemid 44937085)
-
(2006)
Journal of Clinical Microbiology
, vol.44
, Issue.12
, pp. 4498-4510
-
-
Supply, P.1
Allix, C.2
Lesjean, S.3
Cardoso-Oelemann, M.4
Rusch-Gerdes, S.5
Willery, E.6
Savine, E.7
De Haas, P.8
Van Deutekom, H.9
Roring, S.10
Bifani, P.11
Kurepina, N.12
Kreiswirth, B.13
Sola, C.14
Rastogi, N.15
Vatin, V.16
Gutierrez, M.C.17
Fauville, M.18
Niemann, S.19
Skuce, R.20
Kremer, K.21
Locht, C.22
Van Soolingen, D.23
more..
-
22
-
-
0035053858
-
Comparing genomes within the species Mycobacterium tuberculosis
-
DOI 10.1101/gr.166401
-
Kato-Maeda M, Rhee JT, Gingeras TR et al. Comparing genomes within the species Mycobacterium tuberculosis. Genome Res 2001; 11: 547-54. (Pubitemid 32331552)
-
(2001)
Genome Research
, vol.11
, Issue.4
, pp. 547-554
-
-
Kato-Maeda, M.1
Rhee, J.T.2
Gingeras, T.R.3
Salamon, H.4
Drenkow, J.5
Smittipat, N.6
Small, P.M.7
-
23
-
-
8644235014
-
Molecular epidemiology of tuberculosis
-
Narayanan S. Molecular epidemiology of tuberculosis. Indian J Med Res 2004; 120: 233-47. (Pubitemid 39504466)
-
(2004)
Indian Journal of Medical Research
, vol.120
, Issue.4
, pp. 233-247
-
-
Narayanan, S.1
-
24
-
-
33750083037
-
Molecular epidemiology of tuberculosis: Current insights
-
DOI 10.1128/CMR.00061-05
-
Mathema B, Kurepina NE, Bifani PJ, Kreiswirth BN. Molecular epidemiology of tuberculosis: current insights. Clin Microbiol Rev 2006; 19: 658-85. (Pubitemid 44582976)
-
(2006)
Clinical Microbiology Reviews
, vol.19
, Issue.4
, pp. 658-685
-
-
Mathema, B.1
Kurepina, N.E.2
Bifani, P.J.3
Kreiswirth, B.N.4
-
25
-
-
0028287309
-
Transmission of tuberculosis in New York City. An analysis by DNA fingerprinting and conventional epidemiologic methods
-
Alland D, Kalkut GE, Moss AR et al. Transmission of tuberculosis in New York City. An analysis by DNA fingerprinting and conventional epidemiologic methods. N Engl J Med 1994; 330: 1710-6.
-
(1994)
N Engl J Med
, vol.330
, pp. 1710-1716
-
-
Alland, D.1
Kalkut, G.E.2
Moss, A.R.3
-
26
-
-
85038522425
-
-
www.hpa-bionum.org.uk/TBtyping
-
-
-
-
27
-
-
26944439060
-
Polymorphism of variable-number tandem repeats at multiple loci in Mycobacterium tuberculosis
-
DOI 10.1128/JCM.43.10.5034-5043.2005
-
Smittipat N, Billamas P, Palittapongarnpim M et al. Polymorphism of variable-number tandem repeats at multiple loci in Mycobacterium tuberculosis. J Clin Microbiol 2005; 43: 5034-43. (Pubitemid 41484000)
-
(2005)
Journal of Clinical Microbiology
, vol.43
, Issue.10
, pp. 5034-5043
-
-
Smittipat, N.1
Billamas, P.2
Palittapongarnpim, M.3
Thong-On, A.4
Temu, M.M.5
Thanakijcharoen, P.6
Karnkawinpong, O.7
Palittapongarnpim, P.8
-
28
-
-
27744506789
-
Efficient differentiation of Mycobacterium tuberculosis strains of the W-Beijing family from Russia using highly polymorphic VNTR loci
-
DOI 10.1007/s10654-005-3636-5
-
Surikova OV, Voitech DS, Kuzmicheva G et al. Efficient differentiation of Mycobacterium tuberculosis strains of the W-Beijing family from Russia using highly polymorphic VNTR loci. Eur J Epidemiol 2005; 20: 963-74. (Pubitemid 41609497)
-
(2005)
European Journal of Epidemiology
, vol.20
, Issue.11
, pp. 963-974
-
-
Surikova, O.V.1
Voitech, D.S.2
Kuzmicheva, G.3
Tatkov, S.I.4
Mokrousov, I.V.5
Narvskaya, O.V.6
Rot, M.A.7
Van Soolingen, D.8
Filipenko, M.L.9
-
29
-
-
34249700248
-
Improved differentiation of Mycobacterium tuberculosis strains, including many Beijing genotype strains, using a new combination of variable number of tandem repeats loci
-
DOI 10.1016/j.meegid.2007.02.006, PII S1567134807000366
-
Yokoyama E, Kishida K, Uchimura M, Ichinohe S. Improved differentiation of Mycobacterium tuberculosis strains, including many Beijing genotype strains, using a new combination of variable number of tandem repeats loci. Infect Genet Evol 2007; 7: 499-508. (Pubitemid 46825535)
-
(2007)
Infection, Genetics and Evolution
, vol.7
, Issue.4
, pp. 499-508
-
-
Yokoyama, E.1
Kishida, K.2
Uchimura, M.3
Ichinohe, S.4
-
30
-
-
33749014951
-
Differentiation of tuberculosis strains in a population with mainly Beijing-family strains
-
Nikolayevskyy V, Gopaul K, Balabanova Y, Brown T, Fedorin I, Drobniewski F. Differentiation of tuberculosis strains in a population with mainly Beijing-family strains. Emerg Infect Dis 2006; 12: 1406-13. (Pubitemid 44455217)
-
(2006)
Emerging Infectious Diseases
, vol.12
, Issue.9
, pp. 1406-1413
-
-
Nikolayevskyy, V.1
Gopaul, K.2
Balabanova, Y.3
Brown, T.4
Fedorin, I.5
Drobniewski, F.6
-
31
-
-
42049114016
-
Evaluation of the new advanced 15-loci MIRU-VNTR genotyping tool in Mycobacterium tuberculosis molecular epidemiology studies
-
Alonso-Rodríguez N, Martínez-Lirola M, Herránz M et al. Evaluation of the new advanced 15-loci MIRU-VNTR genotyping tool in Mycobacterium tuberculosis molecular epidemiology studies. BMC Microbiol 2008; 8: 34-42.
-
(2008)
BMC Microbiol
, vol.8
, pp. 34-42
-
-
Alonso-Rodríguez, N.1
Martínez-Lirola, M.2
Herránz, M.3
-
32
-
-
0037842783
-
Evaluation of the epidemiologic utility of secondary typing methods for differentiation of Mycobacterium tuberculosis isolates
-
Kwara A, Schiro R, Cowan LS et al. Evaluation of the epidemiologic utility of secondary typing methods for differentiation of Mycobacterium tuberculosis isolates. J Clin Microbiol 2003; 41: 2683-5. (Pubitemid 36712491)
-
(2003)
Journal of Clinical Microbiology
, vol.41
, Issue.6
, pp. 2683-2685
-
-
Kwara, A.1
Schiro, R.2
Cowan, L.S.3
Hyslop, N.E.4
Wiser, M.F.5
Harrison, S.R.6
Kissinger, P.7
Diem, L.8
Crawford, J.T.9
-
33
-
-
33947231744
-
Assessment of an optimized mycobacterial interspersed repetitive-unit- variable-number tandem-repeat typing system combined with spoligotyping for population-based molecular epidemiology studies of tuberculosis
-
DOI 10.1128/JCM.01393-06
-
Oelemann MC, Diel R, Vatin V et al. Assessment of an optimized mycobacterial interspersed repetitive unit-variable-number tandem-repeat typing system combined with spoligotyping for population-based molecular epidemiology studies of tuberculosis. J Clin Microbiol 2007; 45: 691-7. (Pubitemid 46427679)
-
(2007)
Journal of Clinical Microbiology
, vol.45
, Issue.3
, pp. 691-697
-
-
Oelemann, M.C.1
Diel, R.2
Vatin, V.3
Haas, W.4
Rusch-Gerdes, S.5
Locht, C.6
Niemann, S.7
Supply, P.8
|