메뉴 건너뛰기




Volumn 35, Issue 7, 2011, Pages 686-694

Method to detect differentially methylated loci with case-control designs using Illumina arrays

Author keywords

Case control designs; DNA methylation; Mixture model

Indexed keywords

ARTICLE; CASE CONTROL STUDY; CONTROLLED STUDY; DNA METHYLATION; DNA MICROARRAY; FEASIBILITY STUDY; FEMALE; GENE LOCUS; HUMAN; MAJOR CLINICAL STUDY; NORMAL DISTRIBUTION; OVARY CANCER; PROBABILITY; SIMULATION;

EID: 80054763472     PISSN: 07410395     EISSN: 10982272     Source Type: Journal    
DOI: 10.1002/gepi.20619     Document Type: Article
Times cited : (37)

References (25)
  • 1
    • 33644846509 scopus 로고    scopus 로고
    • Epigenetic gene silencing in cancer-a mechanism for early oncogenic pathway addiction?
    • Baylin SB, Ohm JE. 2006. Epigenetic gene silencing in cancer-a mechanism for early oncogenic pathway addiction? Nat Rev Cancer 6:107-116.
    • (2006) Nat Rev Cancer , vol.6 , pp. 107-116
    • Baylin, S.B.1    Ohm, J.E.2
  • 5
    • 79959543119 scopus 로고    scopus 로고
    • Block of proliferation 1 (BOP1) plays an oncogenic role in hepatocellular carcinoma by promoting epithelial-to-mesenchymal transition
    • Chung KY, Cheng IK, Ching AK, Chu JH, Lai PB, Wong N. 2011. Block of proliferation 1 (BOP1) plays an oncogenic role in hepatocellular carcinoma by promoting epithelial-to-mesenchymal transition. Hepatology 54:307-318.
    • (2011) Hepatology , vol.54 , pp. 307-318
    • Chung, K.Y.1    Cheng, I.K.2    Ching, A.K.3    Chu, J.H.4    Lai, P.B.5    Wong, N.6
  • 6
    • 0002629270 scopus 로고
    • Maximum likelihood from incomplete data via the EM algorithm
    • Dempster AP, Laird NM, Rubin DB. 1977. Maximum likelihood from incomplete data via the EM algorithm. J R Stat Soc B 39:1-38.
    • (1977) J R Stat Soc B , vol.39 , pp. 1-38
    • Dempster, A.P.1    Laird, N.M.2    Rubin, D.B.3
  • 8
    • 2642531973 scopus 로고    scopus 로고
    • Epigenetics in human disease and prospects for epigenetic therapy
    • Egger G, Liang G, Aparicio A, Jones PA. 2004. Epigenetics in human disease and prospects for epigenetic therapy. Nature 429:457-463.
    • (2004) Nature , vol.429 , pp. 457-463
    • Egger, G.1    Liang, G.2    Aparicio, A.3    Jones, P.A.4
  • 9
    • 1042278765 scopus 로고    scopus 로고
    • The history of cancer epigenetics
    • Feinberg AP, Tycko B. 2004. The history of cancer epigenetics. Nat Rev Cancer 4:143-153.
    • (2004) Nat Rev Cancer , vol.4 , pp. 143-153
    • Feinberg, A.P.1    Tycko, B.2
  • 10
    • 0345357773 scopus 로고    scopus 로고
    • Gene silencing in cancer in association with promoter hypermethylation
    • Herman JG, Baylin SB. 2003. Gene silencing in cancer in association with promoter hypermethylation. N Engl J Med 349:2042-2054.
    • (2003) N Engl J Med , vol.349 , pp. 2042-2054
    • Herman, J.G.1    Baylin, S.B.2
  • 12
    • 0036274359 scopus 로고    scopus 로고
    • The fundamental role of epigenetic events in cancer
    • Jones PA, Baylin SB. 2002. The fundamental role of epigenetic events in cancer. Nat Rev Genet 3:415-428.
    • (2002) Nat Rev Genet , vol.3 , pp. 415-428
    • Jones, P.A.1    Baylin, S.B.2
  • 13
    • 0032960181 scopus 로고    scopus 로고
    • Cancer epigenetics comes of age
    • Jones PA, Laird PW. 1999. Cancer epigenetics comes of age. Nat Genet 21:163-167.
    • (1999) Nat Genet , vol.21 , pp. 163-167
    • Jones, P.A.1    Laird, P.W.2
  • 14
    • 77957350610 scopus 로고    scopus 로고
    • Identification of driver and passenger DNA methylation in cancer by epigenomic analysis
    • Kalari S, Pfeifer GP. 2010. Identification of driver and passenger DNA methylation in cancer by epigenomic analysis. Adv Genet 70:277-308.
    • (2010) Adv Genet , vol.70 , pp. 277-308
    • Kalari, S.1    Pfeifer, G.P.2
  • 16
    • 78149262820 scopus 로고    scopus 로고
    • A statistical framework for Illumina DNA methylation arrays
    • Kuan PF, Wang SJ, Zhou X, Chu HT. 2010. A statistical framework for Illumina DNA methylation arrays. Bioinformatics 26:2849-2855.
    • (2010) Bioinformatics , vol.26 , pp. 2849-2855
    • Kuan, P.F.1    Wang, S.J.2    Zhou, X.3    Chu, H.T.4
  • 17
    • 77957366305 scopus 로고    scopus 로고
    • DNA methylation and cancer
    • Kulis M, Esteller M. 2010. DNA methylation and cancer. Adv Genet 70:27-56.
    • (2010) Adv Genet , vol.70 , pp. 27-56
    • Kulis, M.1    Esteller, M.2
  • 19
    • 4744344066 scopus 로고    scopus 로고
    • Epigenetics and cancer
    • Lund AH, van Lohuizen M. 2004. Epigenetics and cancer. Genes Dev 18:2315-2335.
    • (2004) Genes Dev , vol.18 , pp. 2315-2335
    • Lund, A.H.1    van Lohuizen, M.2
  • 20
    • 47049116137 scopus 로고    scopus 로고
    • Single-nucleotide polymorphism-mass array reveals commonly deleted regions at 3p22 and 3p14.2 associate with poor clinical outcome in esophageal squamous cell carcinoma
    • Qin TR, Fu L, Sham PC, Kwong DL, Zhu CL, Chu KW, Li Y, Guan XY. 2008 Single-nucleotide polymorphism-mass array reveals commonly deleted regions at 3p22 and 3p14.2 associate with poor clinical outcome in esophageal squamous cell carcinoma. Int J Cancer 123:826-830.
    • (2008) Int J Cancer , vol.123 , pp. 826-830
    • Qin, T.R.1    Fu, L.2    Sham, P.C.3    Kwong, D.L.4    Zhu, C.L.5    Chu, K.W.6    Li, Y.7    Guan, X.Y.8
  • 21
    • 4444237023 scopus 로고    scopus 로고
    • A comparison of cluster analysis methods using DNA methylation data
    • Siegmund KD, Laird PW, Laird-Offringa IA. 2004. A comparison of cluster analysis methods using DNA methylation data. Bioinformatics 20:1896-1904.
    • (2004) Bioinformatics , vol.20 , pp. 1896-1904
    • Siegmund, K.D.1    Laird, P.W.2    Laird-Offringa, I.A.3
  • 22
    • 0042424602 scopus 로고    scopus 로고
    • Statistical significance for genome-wide studies
    • Storey JD, Tibshirani R. 2003. Statistical significance for genome-wide studies. Proc Natl Acad Sci 100:9440-9445.
    • (2003) Proc Natl Acad Sci , vol.100 , pp. 9440-9445
    • Storey, J.D.1    Tibshirani, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.