-
1
-
-
34247271405
-
DNA replication initiation: mechanisms and regulation in bacteria
-
Mott ML, Berger JM, (2007) DNA replication initiation: mechanisms and regulation in bacteria. Nat Rev Microbiol 5: 343-354.
-
(2007)
Nat Rev Microbiol
, vol.5
, pp. 343-354
-
-
Mott, M.L.1
Berger, J.M.2
-
3
-
-
28244473355
-
DnaA coordinates replication initiation and cell cycle transcription in Caulobacter crescentus
-
Hottes AK, Shapiro L, McAdams HH, (2005) DnaA coordinates replication initiation and cell cycle transcription in Caulobacter crescentus. Mol Microbiol 58: 1340-1353.
-
(2005)
Mol Microbiol
, vol.58
, pp. 1340-1353
-
-
Hottes, A.K.1
Shapiro, L.2
McAdams, H.H.3
-
4
-
-
24644506093
-
A transcriptional response to replication status mediated by the conserved bacterial replication protein DnaA
-
Goranov AI, Katz L, Breier AM, Burge CB, Grossman AD, (2005) A transcriptional response to replication status mediated by the conserved bacterial replication protein DnaA. Proc Natl Acad Sci U S A 102: 12932-12937.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 12932-12937
-
-
Goranov, A.I.1
Katz, L.2
Breier, A.M.3
Burge, C.B.4
Grossman, A.D.5
-
5
-
-
0033229814
-
ATP- and ADP-dnaA protein, a molecular switch in gene regulation
-
Speck C, Weigel C, Messer W, (1999) ATP- and ADP-dnaA protein, a molecular switch in gene regulation. Embo J 18: 6169-6176.
-
(1999)
Embo J
, vol.18
, pp. 6169-6176
-
-
Speck, C.1
Weigel, C.2
Messer, W.3
-
6
-
-
77953523412
-
DnaA-ATP acts as a molecular switch to control levels of ribonucleotide reductase expression in Escherichia coli
-
Olliver A, Saggioro C, Herrick J, Sclavi B, (2010) DnaA-ATP acts as a molecular switch to control levels of ribonucleotide reductase expression in Escherichia coli. Mol Microbiol 76: 1555-1571.
-
(2010)
Mol Microbiol
, vol.76
, pp. 1555-1571
-
-
Olliver, A.1
Saggioro, C.2
Herrick, J.3
Sclavi, B.4
-
7
-
-
0035422651
-
Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli
-
Kato J, Katayama T, (2001) Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli. Embo J 20: 4253-4262.
-
(2001)
Embo J
, vol.20
, pp. 4253-4262
-
-
Kato, J.1
Katayama, T.2
-
8
-
-
0032504050
-
The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E. coli chromosomal replicase
-
Katayama T, Kubota T, Kurokawa K, Crooke E, Sekimizu K, (1998) The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E. coli chromosomal replicase. Cell 94: 61-71.
-
(1998)
Cell
, vol.94
, pp. 61-71
-
-
Katayama, T.1
Kubota, T.2
Kurokawa, K.3
Crooke, E.4
Sekimizu, K.5
-
9
-
-
14844288292
-
Protein associations in DnaA-ATP hydrolysis mediated by the Hda-replicase clamp complex
-
Su'etsugu M, Shimuta TR, Ishida T, Kawakami H, Katayama T, (2005) Protein associations in DnaA-ATP hydrolysis mediated by the Hda-replicase clamp complex. J Biol Chem 280: 6528-6536.
-
(2005)
J Biol Chem
, vol.280
, pp. 6528-6536
-
-
Su'etsugu, M.1
Shimuta, T.R.2
Ishida, T.3
Kawakami, H.4
Katayama, T.5
-
10
-
-
33746604804
-
Hda-mediated inactivation of the DnaA protein and dnaA gene autoregulation act in concert to ensure homeostatic maintenance of the Escherichia coli chromosome
-
Riber L, Olsson JA, Jensen RB, Skovgaard O, Dasgupta S, et al. (2006) Hda-mediated inactivation of the DnaA protein and dnaA gene autoregulation act in concert to ensure homeostatic maintenance of the Escherichia coli chromosome. Genes Dev 20: 2121-2134.
-
(2006)
Genes Dev
, vol.20
, pp. 2121-2134
-
-
Riber, L.1
Olsson, J.A.2
Jensen, R.B.3
Skovgaard, O.4
Dasgupta, S.5
-
11
-
-
29744460566
-
Hda inactivation of DnaA is the predominant mechanism preventing hyperinitiation of Escherichia coli DNA replication
-
Camara JE, Breier AM, Brendler T, Austin S, Cozzarelli NR, et al. (2005) Hda inactivation of DnaA is the predominant mechanism preventing hyperinitiation of Escherichia coli DNA replication. EMBO Rep 6: 736-741.
-
(2005)
EMBO Rep
, vol.6
, pp. 736-741
-
-
Camara, J.E.1
Breier, A.M.2
Brendler, T.3
Austin, S.4
Cozzarelli, N.R.5
-
12
-
-
0037177830
-
A nucleotide switch in the Escherichia coli DnaA protein initiates chromosomal replication: evidnece from a mutant DnaA protein defective in regulatory ATP hydrolysis in vitro and in vivo
-
Nishida S, Fujimitsu K, Sekimizu K, Ohmura T, Ueda T, et al. (2002) A nucleotide switch in the Escherichia coli DnaA protein initiates chromosomal replication: evidnece from a mutant DnaA protein defective in regulatory ATP hydrolysis in vitro and in vivo. J Biol Chem 277: 14986-14995.
-
(2002)
J Biol Chem
, vol.277
, pp. 14986-14995
-
-
Nishida, S.1
Fujimitsu, K.2
Sekimizu, K.3
Ohmura, T.4
Ueda, T.5
-
13
-
-
0037628613
-
Controlled initiation of chromosomal replication in Escherichia coli requires functional Hda protein
-
Camara JE, Skarstad K, Crooke E, (2003) Controlled initiation of chromosomal replication in Escherichia coli requires functional Hda protein. J Bacteriol 185: 3244-3248.
-
(2003)
J Bacteriol
, vol.185
, pp. 3244-3248
-
-
Camara, J.E.1
Skarstad, K.2
Crooke, E.3
-
14
-
-
0037062435
-
An expanded view of bacterial DNA replication
-
Noirot-Gros MF, Dervyn E, Wu LJ, Mervelet P, Errington J, et al. (2002) An expanded view of bacterial DNA replication. Proc Natl Acad Sci U S A 99: 8342-8347.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 8342-8347
-
-
Noirot-Gros, M.F.1
Dervyn, E.2
Wu, L.J.3
Mervelet, P.4
Errington, J.5
-
15
-
-
20344367271
-
Bacillus subtilis YabA is involved in determining the timing and synchrony of replication initiation
-
Hayashi M, Ogura Y, Harry EJ, Ogasawara N, Moriya S, (2005) Bacillus subtilis YabA is involved in determining the timing and synchrony of replication initiation. FEMS Microbiol Lett 247: 73-79.
-
(2005)
FEMS Microbiol Lett
, vol.247
, pp. 73-79
-
-
Hayashi, M.1
Ogura, Y.2
Harry, E.J.3
Ogasawara, N.4
Moriya, S.5
-
16
-
-
69949102238
-
Feedback control of DnaA-mediated replication initiation by replisome-associated HdaA protein in Caulobacter
-
Collier J, Shapiro L, (2009) Feedback control of DnaA-mediated replication initiation by replisome-associated HdaA protein in Caulobacter. J Bacteriol 191: 5706-5716.
-
(2009)
J Bacteriol
, vol.191
, pp. 5706-5716
-
-
Collier, J.1
Shapiro, L.2
-
17
-
-
34548524489
-
Spatial complexity and control of a bacterial cell cycle
-
Collier J, Shapiro L, (2007) Spatial complexity and control of a bacterial cell cycle. Curr Opin Biotechnol 18: 333-340.
-
(2007)
Curr Opin Biotechnol
, vol.18
, pp. 333-340
-
-
Collier, J.1
Shapiro, L.2
-
18
-
-
77749327485
-
Getting in the loop: regulation of development in Caulobacter crescentus
-
Curtis PD, Brun YV, (2010) Getting in the loop: regulation of development in Caulobacter crescentus. Microbiol Mol Biol Rev 74: 13-41.
-
(2010)
Microbiol Mol Biol Rev
, vol.74
, pp. 13-41
-
-
Curtis, P.D.1
Brun, Y.V.2
-
19
-
-
0031940593
-
Negative control of bacterial DNA replication by a cell cycle regulatory protein that binds at the chromosome origin
-
Quon KC, Yang B, Domian IJ, Shapiro L, Marczynski GT, (1998) Negative control of bacterial DNA replication by a cell cycle regulatory protein that binds at the chromosome origin. Proc Natl Acad Sci U S A 95: 120-125.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 120-125
-
-
Quon, K.C.1
Yang, B.2
Domian, I.J.3
Shapiro, L.4
Marczynski, G.T.5
-
20
-
-
0037007079
-
Genes directly controlled by CtrA, a master regulator of the Caulobacter cell cycle
-
Laub MT, Chen SL, Shapiro L, McAdams HH, (2002) Genes directly controlled by CtrA, a master regulator of the Caulobacter cell cycle. Proc Natl Acad Sci U S A 99: 4632-4637.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 4632-4637
-
-
Laub, M.T.1
Chen, S.L.2
Shapiro, L.3
McAdams, H.H.4
-
21
-
-
0030034983
-
Cell cycle control by an essential bacterial two-component signal transduction protein
-
Quon KC, Marczynski GT, Shapiro L, (1996) Cell cycle control by an essential bacterial two-component signal transduction protein. Cell 84: 83-93.
-
(1996)
Cell
, vol.84
, pp. 83-93
-
-
Quon, K.C.1
Marczynski, G.T.2
Shapiro, L.3
-
22
-
-
79551629682
-
Spatial gradient of protein phosphorylation underlies replicative asymmetry in a bacterium
-
Chen YE, Tropini C, Jonas K, Tsokos CG, Huang KC, et al. (2011) Spatial gradient of protein phosphorylation underlies replicative asymmetry in a bacterium. Proc Natl Acad Sci U S A 108: 1052-1057.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 1052-1057
-
-
Chen, Y.E.1
Tropini, C.2
Jonas, K.3
Tsokos, C.G.4
Huang, K.C.5
-
23
-
-
0030747761
-
Cell type-specific phosphorylation and proteolysis of a transcriptional regulator controls the G1-to-S transition in a bacterial cell cycle
-
Domian IJ, Quon KC, Shapiro L, (1997) Cell type-specific phosphorylation and proteolysis of a transcriptional regulator controls the G1-to-S transition in a bacterial cell cycle. Cell 90: 415-424.
-
(1997)
Cell
, vol.90
, pp. 415-424
-
-
Domian, I.J.1
Quon, K.C.2
Shapiro, L.3
-
24
-
-
0035041174
-
Physiological consequences of blocked Caulobacter crescentus dnaA expression, an essential DNA replication gene
-
Gorbatyuk B, Marczynski GT, (2001) Physiological consequences of blocked Caulobacter crescentus dnaA expression, an essential DNA replication gene. Mol Microbiol 40: 485-497.
-
(2001)
Mol Microbiol
, vol.40
, pp. 485-497
-
-
Gorbatyuk, B.1
Marczynski, G.T.2
-
25
-
-
31444446780
-
DnaA couples DNA replication and the expression of two cell cycle master regulators
-
Collier J, Murray SR, Shapiro L, (2006) DnaA couples DNA replication and the expression of two cell cycle master regulators. Embo J 25: 346-356.
-
(2006)
Embo J
, vol.25
, pp. 346-356
-
-
Collier, J.1
Murray, S.R.2
Shapiro, L.3
-
26
-
-
2342476606
-
Oscillating global regulators control the genetic circuit driving a bacterial cell cycle
-
Holtzendorff J, Hung D, Brende P, Reisenauer A, Viollier PH, et al. (2004) Oscillating global regulators control the genetic circuit driving a bacterial cell cycle. Science 304: 983-987.
-
(2004)
Science
, vol.304
, pp. 983-987
-
-
Holtzendorff, J.1
Hung, D.2
Brende, P.3
Reisenauer, A.4
Viollier, P.H.5
-
27
-
-
0032521234
-
Cell cycle-dependent transcriptional and proteolytic regulation of FtsZ in Caulobacter
-
Kelly AJ, Sackett MJ, Din N, Quardokus E, Brun YV, (1998) Cell cycle-dependent transcriptional and proteolytic regulation of FtsZ in Caulobacter. Genes Dev 12: 880-893.
-
(1998)
Genes Dev
, vol.12
, pp. 880-893
-
-
Kelly, A.J.1
Sackett, M.J.2
Din, N.3
Quardokus, E.4
Brun, Y.V.5
-
28
-
-
0030011228
-
Cell cycle regulation and cell type-specific localization of the FtsZ division initiation protein in Caulobacter
-
Quardokus E, Din N, Brun YV, (1996) Cell cycle regulation and cell type-specific localization of the FtsZ division initiation protein in Caulobacter. Proc Natl Acad Sci U S A 93: 6314-6319.
-
(1996)
Proc Natl Acad Sci U S A
, vol.93
, pp. 6314-6319
-
-
Quardokus, E.1
Din, N.2
Brun, Y.V.3
-
29
-
-
33745699284
-
MipZ, a spatial regulator coordinating chromosome segregation with cell division in Caulobacter
-
Thanbichler M, Shapiro L, (2006) MipZ, a spatial regulator coordinating chromosome segregation with cell division in Caulobacter. Cell 126: 147-162.
-
(2006)
Cell
, vol.126
, pp. 147-162
-
-
Thanbichler, M.1
Shapiro, L.2
-
30
-
-
77951150088
-
Novel essential residues of Hda for interaction with DnaA in the regulatory inactivation of DnaA: unique roles for Hda AAA Box VI and VII motifs
-
Nakamura K, Katayama T, (2010) Novel essential residues of Hda for interaction with DnaA in the regulatory inactivation of DnaA: unique roles for Hda AAA Box VI and VII motifs. Mol Microbiol 76: 302-317.
-
(2010)
Mol Microbiol
, vol.76
, pp. 302-317
-
-
Nakamura, K.1
Katayama, T.2
-
31
-
-
67649414442
-
Correct timing of dnaA transcription and initiation of DNA replication requires trans translation
-
Cheng L, Keiler KC, (2009) Correct timing of dnaA transcription and initiation of DNA replication requires trans translation. J Bacteriol 191: 4268-4275.
-
(2009)
J Bacteriol
, vol.191
, pp. 4268-4275
-
-
Cheng, L.1
Keiler, K.C.2
-
32
-
-
0028082057
-
Expression of Caulobacter dnaA as a function of the cell cycle
-
Zweiger G, Shapiro L, (1994) Expression of Caulobacter dnaA as a function of the cell cycle. J Bacteriol 176: 401-408.
-
(1994)
J Bacteriol
, vol.176
, pp. 401-408
-
-
Zweiger, G.1
Shapiro, L.2
-
33
-
-
36749067835
-
A DNA methylation ratchet governs progression through a bacterial cell cycle
-
Collier J, McAdams HH, Shapiro L, (2007) A DNA methylation ratchet governs progression through a bacterial cell cycle. Proc Natl Acad Sci U S A 104: 17111-17116.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 17111-17116
-
-
Collier, J.1
McAdams, H.H.2
Shapiro, L.3
-
34
-
-
14544304071
-
Regulated degradation of chromosome replication proteins DnaA and CtrA in Caulobacter crescentus
-
Gorbatyuk B, Marczynski GT, (2005) Regulated degradation of chromosome replication proteins DnaA and CtrA in Caulobacter crescentus. Mol Microbiol 55: 1233-1245.
-
(2005)
Mol Microbiol
, vol.55
, pp. 1233-1245
-
-
Gorbatyuk, B.1
Marczynski, G.T.2
-
35
-
-
79960180892
-
Modularity of the bacterial cell cycle enables independent spatial and temporal control of DNA replication
-
Jonas K, Chen YE, Laub MT, (2011) Modularity of the bacterial cell cycle enables independent spatial and temporal control of DNA replication. Curr Biol 21: 1092-1101.
-
(2011)
Curr Biol
, vol.21
, pp. 1092-1101
-
-
Jonas, K.1
Chen, Y.E.2
Laub, M.T.3
-
36
-
-
0036408373
-
Control of chromosome replication in caulobacter crescentus
-
Marczynski GT, Shapiro L, (2002) Control of chromosome replication in caulobacter crescentus. Annu Rev Microbiol 56: 625-656.
-
(2002)
Annu Rev Microbiol
, vol.56
, pp. 625-656
-
-
Marczynski, G.T.1
Shapiro, L.2
-
37
-
-
77953523412
-
DnaA-ATP acts as a molecular switch to control levels of ribonucleotide reductase expression in Escherichia coli
-
Olliver A, Saggioro C, Herrick J, Sclavi B, (2010) DnaA-ATP acts as a molecular switch to control levels of ribonucleotide reductase expression in Escherichia coli. Mol Microbiol 76: 1555-1571.
-
(2010)
Mol Microbiol
, vol.76
, pp. 1555-1571
-
-
Olliver, A.1
Saggioro, C.2
Herrick, J.3
Sclavi, B.4
-
38
-
-
33644861714
-
A novel regulatory mechanism couples deoxyribonucleotide synthesis and DNA replication in Escherichia coli
-
Gon S, Camara JE, Klungsoyr HK, Crooke E, Skarstad K, et al. (2006) A novel regulatory mechanism couples deoxyribonucleotide synthesis and DNA replication in Escherichia coli. EMBO J 25: 1137-1147.
-
(2006)
EMBO J
, vol.25
, pp. 1137-1147
-
-
Gon, S.1
Camara, J.E.2
Klungsoyr, H.K.3
Crooke, E.4
Skarstad, K.5
-
39
-
-
0025888266
-
Genetics of Caulobacter crescentus
-
Ely B, (1991) Genetics of Caulobacter crescentus. Methods Enzymol 204: 372-384.
-
(1991)
Methods Enzymol
, vol.204
, pp. 372-384
-
-
Ely, B.1
-
40
-
-
0021027842
-
A broad host range mobilization system for in vivo genetic engeneering: Transposon mutagenesis in gram negative bacteria
-
Simon R PU, Puhler A, (1983) A broad host range mobilization system for in vivo genetic engeneering: Transposon mutagenesis in gram negative bacteria. Bio/Technology 1: 784-790.
-
(1983)
Bio/Technology
, vol.1
, pp. 784-790
-
-
Simon, R.P.U.1
Puhler, A.2
-
41
-
-
0031016796
-
Isolation and characterization of a xylose-dependent promoter from Caulobacter crescentus
-
Meisenzahl AC, Shapiro L, Jenal U, (1997) Isolation and characterization of a xylose-dependent promoter from Caulobacter crescentus. J Bacteriol 179: 592-600.
-
(1997)
J Bacteriol
, vol.179
, pp. 592-600
-
-
Meisenzahl, A.C.1
Shapiro, L.2
Jenal, U.3
-
43
-
-
53849100653
-
SpoT regulates DnaA stability and initiation of DNA replication in carbon-starved Caulobacter crescentus
-
Lesley JA, Shapiro L, (2008) SpoT regulates DnaA stability and initiation of DNA replication in carbon-starved Caulobacter crescentus. J Bacteriol 190: 6867-6880.
-
(2008)
J Bacteriol
, vol.190
, pp. 6867-6880
-
-
Lesley, J.A.1
Shapiro, L.2
-
44
-
-
0003785155
-
-
Cold Spring Harbor, NY, Cold Spring Harbor Laboratory Press
-
Miller JH, (1972) Expreriments in Molecular Genetics. Cold Spring Harbor, NY Cold Spring Harbor Laboratory Press.
-
(1972)
Expreriments in Molecular Genetics
-
-
Miller, J.H.1
-
45
-
-
0017740506
-
Envelope-associated nucleoid from Caulobacter crescentus stalked and swarmer cells
-
Evinger M, Agabian N, (1977) Envelope-associated nucleoid from Caulobacter crescentus stalked and swarmer cells. J Bacteriol 132: 294-301.
-
(1977)
J Bacteriol
, vol.132
, pp. 294-301
-
-
Evinger, M.1
Agabian, N.2
-
46
-
-
0021592032
-
In vitro insertional mutagenesis with a selectable DNA fragment
-
Prentki P, Krisch HM, (1984) In vitro insertional mutagenesis with a selectable DNA fragment. Gene 29: 303-313.
-
(1984)
Gene
, vol.29
, pp. 303-313
-
-
Prentki, P.1
Krisch, H.M.2
-
47
-
-
0027105132
-
A developmentally regulated Caulobacter flagellar promoter is activated by 3′ enhancer and IHF binding elements
-
Gober JW, Shapiro L, (1992) A developmentally regulated Caulobacter flagellar promoter is activated by 3′ enhancer and IHF binding elements. Mol Biol Cell 3: 913-926.
-
(1992)
Mol Biol Cell
, vol.3
, pp. 913-926
-
-
Gober, J.W.1
Shapiro, L.2
|