Characterization of arabidopsis CTP:3-deoxy-d-manno-2-octulosonate cytidylyltransferase (CMP-KDO synthetase), the enzyme that activates KDO during rhamnogalacturonan II biosynthesis

Plant and Cell Physiology

Volumn 52, Issue 10, 2011, Pages 1832-1843

  Kobayashi, Masaru ^a   Kouzu, Nagisa ^a   Inami, Akina ^a   Toyooka, Kiminori ^b   Konishi, Yuki ^a   Matsuoka, Ken ^c   Matoh, Toru ^a  

^a KYOTO UNIVERSITY   (Japan)

^b Elements Chemistry Laboratory   (Japan)

^c KYUSHU UNIVERSITY   (Japan)

Author keywords

Arabidopsis; Boron; CMP KDO synthetase; KDO; Pectin; Rhamnogalacturonan II

Indexed keywords

3 DEOXY MANNO OCT 2 ULOPYRANOSONIC ACID; 3 DEOXY MANNO OCTULOSONATE CYTIDYLTRANSFERASE; 3-DEOXY-MANNO-OCT-2-ULOPYRANOSONIC ACID; 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLTRANSFERASE; NUCLEOTIDYLTRANSFERASE; PECTIN; PLANT DNA; RECOMBINANT PROTEIN; RHAMNOGALACTURONAN II; SUGAR ACID;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARTICLE; BIOSYNTHESIS; CELL FRACTIONATION; CHEMISTRY; CHROMOSOME SEGREGATION; CYTOLOGY; ENZYMOLOGY; FLOWER; GENE EXPRESSION REGULATION; GENETICS; GENOTYPE; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MOLECULAR GENETICS; MUTATION; POLLEN TUBE; PROTEIN TRANSPORT; SEQUENCE ALIGNMENT; ULTRASTRUCTURE;

AMINO ACID SEQUENCE; ARABIDOPSIS; CHROMOSOME SEGREGATION; DNA, PLANT; GENOTYPE; GERM CELLS, PLANT; MOLECULAR SEQUENCE DATA; MUTAGENESIS, INSERTIONAL; MUTATION; NUCLEOTIDYLTRANSFERASES; PECTINS; POLLEN TUBE; PROTEIN TRANSPORT; RECOMBINANT PROTEINS; SEQUENCE ALIGNMENT; SUBCELLULAR FRACTIONS; SUGAR ACIDS;

ARABIDOPSIS;

EID: 80054698671     PISSN: 00320781     EISSN: 14719053     Source Type: Journal    
DOI: 10.1093/pcp/pcr120     Document Type: Article

References (41)

1. Alexander, M.P. (1969) Differential staining of aborted and nona-borted pollen. Stain Technol. 44: 117-122.
2. An, G. (1985) High efficiency transformation of cultured tobacco cells. Plant Physiol. 79: 568-570.
3. Axelos, M., Curie, C., Mazzolini, L., Bardet, C. and Lescure, B. (1992) A protocol for transient gene expression in Arabidopsis thaliana protoplasts isolated from cell suspension cultures. Plant Physiol. Biochem. 30: 123-128.
4. Boavida, L.C. and McCormick, S. (2007) Temperature as a determinant factor for increased and reproducible in vitro pollen germination in Arabidopsis thaliana. Plant J. 52: 570-582. (Pubitemid 47621873)
5. Brown, P.H. and Shelp, B.J. (1997) Boron mobility in plants. Plant Soil 193: 85-101. (Pubitemid 27392916)
6. Chiu, W., Niwa, Y., Zeng, W., Hirano, T., Kobayashi, H. and Sheen, J. (1996) Engineered GFP as a vital reporter in plants. Curr. Biol. 6: 325-330.
7. Clough, S.J. and Bent, A.F. (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16: 735-743.
8. Delmas, F., Seveno, M., Northey, J.G., Hernould, M., Lerouge, P., McCourt, P. et al. (2008) The synthesis of the rhamnogalacturonan II component 3-deoxy-D-manno-2-octulosonic acid (Kdo) is required for pollen tube growth and elongation. J. Exp. Bot. 59: 2639-2647. (Pubitemid 351957484)
9. Elthon, T.E., Nickels, R.L. and McIntosh, L. (1989) Monoclonal antibodies to the alternative oxidase of higher plant mitochondria. Plant Physiol. 89: 1311-1317.
10. Fleischer, A., Titel, C. and Ehwald, R. (1998) The boron requirement and cell wall properties of growing and stationary suspension-cultured Chenopodium album L. cells. Plant Physiol. 117: 1401-1410. (Pubitemid 128652913)
11. Hart, D.A. and Kindel, P.K. (1970) Isolation and partial characterization of apiogalacturonans from the cell wall of Lemna minor. Biochem. J. 116: 569-579.
12. Heazlewood, J.L., Tonti-Filippini, J.S., Gout, A.M., Day, D.A., Whelan, J. and Millar, A.H. (2004) Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Plant Cell 16: 241-256. (Pubitemid 38162366)
13. Iwai, H., Masaoka, N., Ishii, T. and Satoh, S. (2002) A pectin glucuro-nyltransferase gene is essential for intercellular attachment in the plant meristem. Proc. Natl Acad. Sci. USA 99: 16319-16324. (Pubitemid 35462793)
14. Johnson-Brousseau, S.A. and McCormick, S. (2004) A compendium of methods useful for characterizing Arabidopsis pollen mutants and gametophytically- expressed genes. Plant J. 39: 761-775. (Pubitemid 39218783)
15. Kobayashi, M., Nakagawa, H., Asaka, T. and Matoh, T. (1999) Borate-rhamnogalacturonan II bonding reinforced by Ca2+ retains pectic polysaccharides in higher-plant cell walls. Plant Physiol. 119: 199-204.
16. Kobayashi, M., Ohno, K. and Matoh, T. (1997) Boron nutrition of cultured tobacco BY-2 cells. II. Characterization of the boron-poly-saccharide complex. Plant Cell Physiol. 38: 676-683. (Pubitemid 127466555)
17. Koshiba, T., Kobayashi, M. and Matoh, T. (2009) Boron nutrition of tobacco BY-2 cells. V. Oxidative damage is the major cause of cell death induced by boron deprivation. Plant Cell Physiol. 50: 26-36.
18. Koshiba, T., Kobayashi, M., Ishihara, A. and Matoh, T. (2010) Boron nutrition of cultured tobacco BY-2 cells. VI. Calcium is involved in early responses to boron deprivation. Plant Cell Physiol. 51: 323-327.
19. Li, C., Guan, Z., Liu, D. and Raetz, C.R.H. (2011) Pathway for lipid A biosynthesis in Arabidopsis thaliana resembling that of Escherichia coli. Proc. Natl Acad. Sci. USA 108: 11387-11392.
20. Mohnen, D. (2008) Pectin structure and biosynthesis. Curr. Opin. Plant Biol. 11: 266-277.
21. Matoh, T., Ishigaki, K., Mizutani, M., Matsunaga, W. and Takabe, K. (1992) Boron nutrition of cultured tobacco BY-2 cells. I. Requirement for and intracellular localization of boron and selection of cells that tolerate low levels of boron. Plant Cell Physiol. 33: 1135-1141.
22. Matoh, T., Kawaguchi, S. and Kobayashi, M. (1996) Ubiquity of a borate-rhamnogalacturonan II complex in the cell walls of higher plants. Plant Cell Physiol. 37: 636-640. (Pubitemid 26380647)
23. Matoh, T., Takasaki, M., Kobayashi, M. and Takabe, K. (2000) Boron nutrition of cultured tobacco BY-2 cells. III. Characterization of the boron-rhamnogalacturonan II complex in cells acclimated to low levels of boron. Plant Cell Physiol. 41: 363-366. (Pubitemid 30213337)
24. Matsuura, K., Miyagawa, I., Kobayashi, M., Ohta, D. and Matoh, T. (2003) Arabidopsis 3-deoxy-D-manno-oct-2-ulosonate-8-phosphate synthase: cDNA cloning and expression analyses. J. Exp. Bot. 54: 1785-1787. (Pubitemid 36821540)
25. Misaki, R., Kajiura, H., Fujii, K., Fujiyama, K. and Seki, T. (2009) Cloning and characterization of cytidine monophosphate-3-deoxy-D-manno- octulosonate synthetase from Arabidopsis thaliana. J. Biosci. Bioeng. 108: 527-529.
26. Nagata, T., Okada, K., Takebe, I. and Matsui, C. (1981) Delivery of tobacco mosaic virus RNA into plant protoplasts mediated by reverse-phase evaporation vesicles (liposomes). Mol. Gen. Genet. 184: 161-165.
27. Obayashi, T., Hayashi, S., Saeki, M., Ohta, H. and Kinoshita, K. (2009) ATTED-II provides coexpressed gene networks for Arabidopsis. Nucleic Acids Res. 37: D987-D991.
28. O'Neill, M.A., Eberhard, S., Albersheim, P. and Darvill, A.G. (2001) Requirement of borate cross-linking of cell wall rhamnogalacturo-nan II for Arabidopsis growth. Science 294: 846-849. (Pubitemid 33032101)
29. Preuss, D., Rhee, S.Y. and Davis, R.W. (1994) Tetrad analysis possible in Arabidopsis with mutation of the QUARTET (QRT) genes. Science 264: 1458-1460. (Pubitemid 24217136)
30. Raetz, C.R.H. (1990) Biochemistry of endotoxins. Annu. Rev. Biochem. 59: 129-170.
31. Ray, P.H. and Benedict, C.D. (1982) CTP:CMP-3-deoxy-D-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase). Methods Enzymol. 83: 535-540.
32. Royo, J., Gomez, E. and Hueros, G. (2000) A maize homologue of the bacterial CMP-3-deoxy-D-manno-2-octulosonate (KDO) synthe-tases. Similar pathways operate in plants and bacteria for the activation of KDO prior to its incorporation into outer cellular envelopes. J. Biol. Chem. 275: 24993-24999. (Pubitemid 30626608)
33. Ryden, P., Sugimoto-Shirasu, K., Smith, A.C., Findlay, K., Reiter, W.D. and McCann, M.C. (2003) Tensile properties of Arabidopsis cell walls depend on both a xyloglucan cross-linked microfibrillar network and rhamnogalacturonan II-borate complexes. Plant Physiol. 132: 1033-1040. (Pubitemid 36715100)
34. Séveno, M., Séveno-Carpentier, E., Voxeur, A., Menu-Bouaouiche, L., Rihouey, C., Delmas, F. et al. (2010) Characterization of a putative 3-deoxy-D-manno-2-octulosonic acid (Kdo) transferase gene from Arabidopsis thaliana. Glycobiology 20: 617-628.
35. Stevenson, T., Darvill, A.G. and Albersheim, P. (1988) 3-Deoxy-D-lyxo-2-heptulosaric acid, a component of the plant cell-wall polysacchar-ide rhamnogalacturonan-II. Carbohydr. Res. 179: 269-288.
36. Takashima, S., Seino, J., Nakano, T., Fujiyama, K., Tsujimoto, M., Ishida, N. et al. (2009) Analysis of CMP-sialic acid transporter-like proteins in plants. Phytochemistry 70: 1973-1981.
37. Toufighi, K., Brady, S.M., Austin, R., Ly, E. and Provart, N.J. (2005) The Botany Array Resource: e-Northerns, Expression Angling, and promoter analyses. Plant J. 43: 153-163. (Pubitemid 40962743)
38. Toyooka, K., Goto, Y., Asatsuma, S., Koizumi, M., Mitsui, T. and Matsuoka, K. (2009) A mobile secretory vesicle cluster involved in mass transport from the Golgi to plant cell exterior. Plant Cell 21: 1212-1229.
39. Wimmer, M.A., Lochnit, G., Bassil, E., Muhling, K.H. and Goldbach, H.E. (2009) Membrane-associated, boron-interacting proteins isolated by boronate affinity chromatography. Plant Cell Physiol. 50: 1292-1304.
40. Winter, D., Vinegar, B., Nahal, H., Ammar, R., Wilson, G.V. and Provart, N.J. (2007) An 'Electronic Fluorescent Pictograph' browser for exploring and analyzing large-scale biological data sets. PLoS ONE 2: e718.
41. Yuasa, K., Toyooka, K., Fukuda, H. and Matsuoka, K. (2005) Membrane-anchored prolyl hydroxylase with an export signal from the endoplasmic reticulum. Plant J. 41: 81-94.