Diversity of Salmonella enterica serovar Derby isolated from pig, pork and humans in Germany

International Journal of Food Microbiology

Volumn 151, Issue 2, 2011, Pages 141-149

  Hauser, Elisabeth ^a,b   Hebner, Franka ^c   Tietze, Erhard ^c   Helmuth, Reiner ^a   Junker, Ernst ^a   Prager, Rita ^c   Schroeter, Andreas ^a   Rabsch, Wolfgang ^c   Fruth, Angelika ^c   Malorny, Burkhard ^a  

^a FEDERAL INSTITUTE FOR RISK ASSESSMENT   (Germany)

^b FREIE UNIVERSITÄT BERLIN   (Germany)

^c ROBERT KOCH INSTITUTE   (Germany)

Author keywords

Antimicrobial resistance; Microarray analysis; Multilocus sequence typing; Pulsed field gel electrophoresis; Salmonella; Serovar S. Derby

Indexed keywords

AMOXICILLIN PLUS CLAVULANIC ACID; AMPICILLIN; CEFTIOFUR; CHLORAMPHENICOL; CIPROFLOXACIN; COLISTIN; COTRIMOXAZOLE; FLORFENICOL; GENOMIC DNA; GENTAMICIN; KANAMYCIN; NALIDIXIC ACID; NEOMYCIN; PROTEIN SOPA; PROTEIN SOPB; PROTEIN SOPD; SPECTINOMYCIN; STREPTOMYCIN; SULFAMETHOXAZOLE; TETRACYCLINE; TRIMETHOPRIM; UNCLASSIFIED DRUG; VIRULENCE FACTOR;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; BACTERIAL TRANSMISSION; BACTERIUM CONTAMINATION; BACTERIUM ISOLATE; CLONE; CONTROLLED STUDY; FIMBRIA; FOOD CHAIN; FOOD CONTAMINATION; FOOD CONTROL; GENOTYPE; GERMANY; HEALTH HAZARD; HUMAN; INFECTION RISK; MICROARRAY ANALYSIS; MICROBIAL DIVERSITY; MULTIDRUG RESISTANCE; MULTILOCUS SEQUENCE TYPING; NONHUMAN; NUCLEOTIDE SEQUENCE; PATHOGENICITY ISLAND; PHENOTYPE; PORK; PROPHAGE; PULSED FIELD GEL ELECTROPHORESIS; SALMONELLA ENTERICA; SALMONELLA INFANTIS; SALMONELLA PARATYPHI; SALMONELLA VIRCHOW; SEROTYPE; SWINE; VARIABLE NUMBER OF TANDEM REPEAT;

ANIMALS; ANTI-BACTERIAL AGENTS; BACTERIAL TYPING TECHNIQUES; DNA FINGERPRINTING; DNA, BACTERIAL; DRUG RESISTANCE, MULTIPLE, BACTERIAL; ELECTROPHORESIS, GEL, PULSED-FIELD; GENOMIC ISLANDS; GENOTYPE; GERMANY; HUMANS; MEAT; MICROBIAL SENSITIVITY TESTS; MINISATELLITE REPEATS; MULTILOCUS SEQUENCE TYPING; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; SALMONELLA ENTERICA; SALMONELLA INFECTIONS; SALMONELLA INFECTIONS, ANIMAL; SWINE; SWINE DISEASES; VIRULENCE; VIRULENCE FACTORS;

SALMONELLA; SALMONELLA ENTERICA; SALMONELLA PARATYPHI; SUIDAE;

EID: 80054065521     PISSN: 01681605     EISSN: 18793460     Source Type: Journal    
DOI: 10.1016/j.ijfoodmicro.2011.08.020     Document Type: Article

References (45)

1. Akiba M., Nakamura K., Shinoda D., Yoshii N., Ito H., Uchida I., Nakazawa M. Detection and characterization of variant Salmonella genomic island 1s from Salmonella Derby isolates. Japanese Journal of Infectious Diseases 2006, 59:341-345.
2. Amar C.F., Arnold C., Bankier A., Dear P.H., Guerra B., Hopkins K.L., Liebana E., Mevius D.J., Threlfall E.J. Real-time PCRs and fingerprinting assays for the detection and characterization of Salmonella Genomic Island-1 encoding multidrug resistance: application to 445 European isolates of Salmonella, Escherichia coli, Shigella, and Proteus. Microbial Drug Resistance 2008, 14:79-92.
3. Amavisit P., Lightfoot D., Browning G.F., Markham P.F. Variation between pathogenic serovars within Salmonella pathogenicity islands. Journal of Bacteriology 2003, 185:3624-3635.
4. Anjum M.F., Choudhary S., Morrison V., Snow L.C., Mafura M., Slickers P., Ehricht R., Woodward M.J. Identifying antimicrobial resistance genes of human clinical relevance within Salmonella isolated from food animals in Great Britain. Journal of Antimicrobial Chemotherapy 2011, 66:550-559.
5. Anonymous Commission Decision of 29 September 2006 concerning a financial contribution by the Community towards a baseline survey on the prevalence of Salmonella in slaughter pigs to be carried out in the Member States. Official Journal of European Union 6.10.2006 2006, L275-51-L275/61.
6. Arguello, H., Carvajal, A., Collazos, J.A., Garcia-Feliz, C. Rubio, P., in press. Prevalence and serovars of Salmonella enterica on pig carcasses, slaughtered pigs and the environment of four Spanish slaughterhouses. Food Research International doi:. doi:10.1016/j.foodres.2011.04.017.
7. Beltran P., Musser J.M., Helmuth R., Farmer J.J., Frerichs W.M., Wachsmuth I.K., Ferris K., McWhorter A.C., Wells J.G., Cravioto A. Toward a population genetic analysis of Salmonella: genetic diversity and relationships among strains of serotypes S. choleraesuis, S. derby, S. dublin, S. enteritidis, S. heidelberg, S. infantis, S. newport, and S. typhimurium. Proceeding of the National Academy of Sciences USA 1988, 85:7753-7757.
8. Boyen F., Haesebrouck F., Maes D., Van I.F., Ducatelle R., Pasmans F. Non-typhoidal Salmonella infections in pigs: a closer look at epidemiology, pathogenesis and control. Veterinary Microbiology 2008, 130:1-19.
9. Clinical and Laboratory Standards Institute Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically. Approved Standard 7th ed. (M7-A7) Vol.23, No. 2 2006, Clinical and Laboratory Standards Institute, Wayne, USA.
10. Clothier K.A., Kinyon J.M., Frana T.S. Comparison of Salmonella serovar isolation and antimicrobial resistance patterns from porcine samples between 2003 and 2008. Journal of Veterinary Diagnostic Investigation 2010, 22:578-582.
11. De Busser E.V., Maes D., Houf K., Dewulf J., Imberechts H., Bertrand S., De Z.L. Detection and characterization of Salmonella in lairage, on pig carcasses and intestines in five slaughterhouses. International Journal of Food Microbiology 2011, 145:279-286.
12. Ebuchi S., Baba A., Uryu K., Hiwaki H. Two outbreaks caused by Salmonella Derby and S. Anatum at grilled-meat restaurants in Fukuoka city. Japanese Journal of Infectious Diseases 2006, 59:405-406.
13. EFSA Opinion of the scientific panel BIOHAZ related to "Risk assessment and mitigation options of Salmonella in pig production". The EFSA Journal 2006, 341:1-131.
14. EFSA Report of the Task Force on Zoonoses data collection on the analysis of the baseline survey on the prevalence of Salmonella in slaughter pigs, in the EU, 2006-2007. The EFSA Journal 2008, 135:1-111.
15. EFSA Analysis of the baseline survey on the prevalence of Salmonella in holdings with breeding pigs, in the EU, 2008, Part A: Salmonella prevalence estimates. The EFSA Journal 2009, 7:1377.
16. EFSA, ECDC The European Union summary report on trends and sources of zoonoses, zoonotic agents and food-borne outbreaks in 2009. The EFSA Journal 2011, 9:2090.
17. Foley S.L., Lynne A.M., Nayak R. Salmonella challenges: prevalence in swine and poultry and potential pathogenicity of such isolates. Journal of Animal Science 2008, 86:E149-E162.
18. Gebreyes W.A., Davies P.R., Turkson P.K., Morrow W.E., Funk J.A., Altier C., Thakur S. Characterization of antimicrobial-resistant phenotypes and genotypes among Salmonella enterica recovered from pigs on farms, from transport trucks, and from pigs after slaughter. Journal of Food Protection 2004, 67:698-705.
19. Giovannacci I., Queguiner S., Ragimbeau C., Salvat G., Vendeuvre J.L., Carlier V., Ermel G. Tracing of Salmonella spp. in two pork slaughter and cutting plants using serotyping and macrorestriction genotyping. Journal of Applied Microbiology 2001, 90:131-147.
20. Grimont P.A., Weill F.X. Antigenic formulae of the Salmonella serovars 2007, WHO collaborating Centre for Reference and Research on Salmonella, Institut Pasteur.
21. Huang T.M., Lin T.L., Wu C.C. Serovar distribution and antimicrobial susceptibility of swine Salmonella isolates from clinically ill pigs in diagnostic submissions from Indiana in the United States. Letters of Applied Microbiology 2009, 48:331-336.
22. Huehn S., Bunge C., Junker E., Helmuth R., Malorny B. Poultry associated Salmonella enterica subsp. enterica serovar 4,12:d: - reveals high clonality and a distinct pathogenicity gene repertoire. Applied and Environmental Microbiology 2009, 75:1011-1020.
23. Huehn S., Helmuth R., Bunge C., van Pelt W., Malorny B. Characterization of pathogenic and resistant genome repertoire reveals two clonal lines in Salmonella enterica subsp. enterica serovar Paratyphi B (+)-tartrate positive. Foodborne Pathogens and Disease 2009, 6:431-443.
24. Huehn S., La Ragione R.M., Anjum M., Saunders M., Woodward M.J., Bunge C., Helmuth R., Hauser E., Guerra B., Beutlich J., Brisabois A., Peters T., Svensson L., Madajczak G., Litrup E., Imre A., Herrera-Leon S., Mevius D., Newell D.G., Malorny B. Virulotyping and antimicrobial resistance typing of Salmonella enterica serovars relevant to human health in Europe. Foodborne Pathogens and Disease 2010, 7:523-535.
25. Kerouanton A., Marault M., Lailler R., Weill F.X., Feurer C., Espie E., Brisabois A. Pulsed-field gel electrophoresis subtyping database for foodborne Salmonella enterica serotype discrimination. Foodborne Pathogens and Disease 2007, 4:293-303.
26. Kerouanton A., Rose V., Weill F.X., Granier S.A., Chemaly M., Brisabois A., Denis M. Comparison of PFGE and antimicrobial resistance profiles of Salmonella enterica serotype Derby isolated from pig, pork and human salmonellosis in France. Proceedings International Symposium Salmonella and Salmonellosis 2010, 235-238. Zoopole développement - ISPAIA, Ploufragan, France. P. Colin, G. Clement (Eds.).
27. Kidgell C., Reichard U., Wain J., Linz B., Torpdahl M., Dougan G., Achtman M. Salmonella typhi, the causative agent of typhoid fever, is approximately 50,000years old. Infection, Genetics and Evolution 2002, 2:39-45.
28. Lindstedt B.A., Vardund T., Aas L., Kapperud G. Multiple-locus variable-number tandem-repeats analysis of Salmonella enterica subsp. enterica serovar Typhimurium using PCR multiplexing and multicolor capillary electrophoresis. Journal of Microbiological Methods 2004, 59:163-172.
29. Ling J.M., Chan E.W., Cheng A.F. Molecular epidemiological analysis of Salmonella enterica serotype Derby infections in Hong Kong. Journal of Infection 2001, 42:145-153.
30. Litrup E., Torpdahl M., Malorny B., Huehn S., Christensen H., Nielsen E.M. Association between phylogeny, virulence potential and serovars of Salmonella enterica. Infection, Genetics and Evolution 2010, 10:1132-1139.
31. Maiden M.C. Multilocus sequence typing of bacteria. Annual Review of Microbiology 2006, 60:561-588.
32. Maiden M.C., Bygraves J.A., Feil E., Morelli G., Russell J.E., Urwin R., Zhang Q., Zhou J., Zurth K., Caugant D.A., Feavers I.M., Achtman M., Spratt B.G. Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms. Proceeding of the National Academy of Sciences USA 1998, 95:3140-3145.
33. Michael G.B., Cardoso M., Rabsch W., Schwarz S. Phenotypic and genotypic differentiation of porcine Salmonella enterica subsp. enterica serovar Derby isolates. Veterinary Microbiology 2006, 118:312-318.
34. Prager R., Mirold S., Tietze E., Strutz U., Knuppel B., Rabsch W., Hardt W.D., Tschäpe H. Prevalence and polymorphism of genes encoding translocated effector proteins among clinical isolates of Salmonella enterica. International Journal of Medical Microbiology 2000, 290:605-617.
35. Raffatellu M., Wilson R.P., Chessa D., Andrews-Polymenis H., Tran Q.T., Lawhon S., Khare S., Adams L.G., Bäumler A.J. SipA, SopA, SopB, SopD, and SopE2 contribute to Salmonella enterica serotype Typhimurium invasion of epithelial cells. Infection and Immunity 2005, 73:146-154.
36. Ribot E.M., Fair M.A., Gautom R., Cameron D.N., Hunter S.B., Swaminathan B., Barrett T.J. Standardization of pulsed-field gel electrophoresis protocols for the subtyping of Escherichia coli O157:H7, Salmonella, and Shigella for PulseNet. Foodborne Pathogens and Disease 2006, 3:59-67.
37. Rubbo S.D. Cross-infection in hospital due to Salmonella derby. Journal of Hygiene (London) 2010, 46:158-163.
38. Sanders E., Sweeney F.J., Friedman E.A., Boring J.R., Randall E.L., Polk L.D. An outbreak of hospital-associated infections due to Salmonella derby. Journal of Medical American Association 1963, 186:984-986.
39. Schroeter A., Hoog B., Helmuth R. Resistance of Salmonella isolates in Germany. Journal of Veterinary Medicine B 2004, 51:389-392.
40. Sukhnanand S., Alcaine S., Warnick L.D., Su W.L., Hof J., Craver M.P., McDonough P., Boor K.J., Wiedmann M. DNA sequence-based subtyping and evolutionary analysis of selected Salmonella enterica serotypes. Journal of Clinical Microbiology 2005, 43:3688-3698.
41. Tankouo-Sandjong B., Sessitsch A., Liebana E., Kornschober C., Allerberger F., Hächler H., Bodrossy L. MLST-v, multilocus sequence typing based on virulence genes, for molecular typing of Salmonella enterica subsp. enterica serovars. Journal of Microbiological Methods 2007, 69:23-36.
42. Valdezate S., Vidal A., Herrera-Leon S., Pozo J., Rubio P., Usera M.A., Carvajal A., Echeita M.A. Salmonella Derby clonal spread from pork. Emerging Infectious Diseases 2005, 11:694-698.
43. Xia S., Hendriksen R.S., Xie Z., Huang L., Zhang J., Guo W., Xu B., Ran L., Aarestrup F.M. Molecular characterization and antimicrobial susceptibility of Salmonella isolates from infections in humans in Henan Province, China. Journal of Clinical Microbiology 2009, 47:401-409.
44. Zhang S., Santos R.L., Tsolis R.M., Stender S., Hardt W.D., Bäumler A.J., Adams L.G. The Salmonella enterica serotype Typhimurium effector proteins SipA, SopA, SopB, SopD, and SopE2 act in concert to induce diarrhea in calves. Infection and Immunity 2002, 70:3843-3855.
45. Zhao S., McDermott P.F., White D.G., Qaiyumi S., Friedman S.L., Abbott J.W., Glenn A., Ayers S.L., Post K.W., Fales W.H., Wilson R.B., Reggiardo C., Walker R.D. Characterization of multidrug resistant Salmonella recovered from diseased animals. Veterinary Microbiology 2007, 123:122-132.