Biomedical Event Detection using Rules, Conditional Random Fields and Parse Tree Distances

2009 Biomedical Natural Language Processing Workshop, BioNLP 2009 - Companion Volume: Shared Task on Event Extraction

Volumn , Issue , 2009, Pages 115-118

  Sarafraz, Farzaneh ^a   Eales, James ^a   Mohammadi, Reza ^b   Dickerson, Jonathan ^a   Robertson, David ^a   Nenadic, Goran ^a  

^a UNIVERSITY OF MANCHESTER   (United Kingdom)

^b SHARIF UNIVERSITY OF TECHNOLOGY   (Iran)

Author keywords

[No Author keywords available]

Indexed keywords

FORESTRY;

EVENT TRIGGER; EVENT TYPES; EVENTS DETECTION; F-SCORE; PARSE TREES; PERFORMANCE; RELATIVE DISTANCES; RULES BASED SYSTEMS; SET OF RULES; TEST DATA;

RANDOM PROCESSES;

EID: 80054032619     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (6)

1. Emms M. 2008. Tree-distance and some other Variants of evalb. Proc. of LREC 2008, pp 1373-1379.
2. Fu W. et al. 2008. Human Immunodeficiency Virus type 1, Human protein interaction database at NCBI, Nucleic Acid Research 2008, D417-D422
3. Kim JD et al. 2009. Overview of BioNLP'09 Shared Task on Event Extraction, Proc. of BioNLP NAACL 2009 Workshop (to appear)
4. Sagae K, Tsujii J. 2007. Dependency Parsing and Domain Adaptation with LR Models and Parser Ensembles. Proc. of the CoNLL 2007 Shared Task, 1044-50
5. Tsuruoka Y. et al. 2005. Developing a Robust Part of-Speech Tagger for Biomedical Text. Advances in Informatics, 382-392.
6. Yang H. et al. 2008. Identification of Transcription Factor Contexts in Literature using Machine Learning Approaches. BMC Bioinformatics, Vol. 9(3):S11.