-
1
-
-
84975742565
-
A map of human genome variation from population-scale sequencing
-
1000 Genomes Project Consortium
-
1000 Genomes Project Consortium, 2010 A map of human genome variation from population-scale sequencing. Nature 467: 1061-1073
-
(2010)
Nature
, vol.467
, pp. 1061-1073
-
-
-
2
-
-
77950657866
-
Accurate detection and genotyping of snps utilizing population sequencing data
-
Bansal, V., O. Harismendy, R. Tewhey, S. S. Murray, N. J. Schork et al., 2010 Accurate detection and genotyping of snps utilizing population sequencing data. Genome Res. 20: 537-545
-
(2010)
Genome Res
, vol.20
, pp. 537-545
-
-
Bansal, V.1
Harismendy, O.2
Tewhey, R.3
Murray, S.S.4
Schork, N.J.5
-
3
-
-
77951226627
-
The sanger fastq file format for sequences with quality scores, and the solexa/illumina fastq variants
-
Cock, P. J. A., C. J. Fields, N. Goto, M. L. Heuer, and P. M. Rice, 2010 The sanger fastq file format for sequences with quality scores, and the solexa/illumina fastq variants. Nucleic Acids Res. 38: 1767-1771
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 1767-1771
-
-
Cock, P.J.A.1
Fields, C.J.2
Goto, N.3
Heuer, M.L.4
Rice, P.M.5
-
4
-
-
62549085618
-
Human genetic variation and its contribution to complex traits
-
Frazer, K., S. Murray, N. Schork, and E. Topol, 2009 Human genetic variation and its contribution to complex traits. Nat. Rev. Genet. 10: 241-251
-
(2009)
Nat. Rev. Genet
, vol.10
, pp. 241-251
-
-
Frazer, K.1
Murray, S.2
Schork, N.3
Topol, E.4
-
5
-
-
84972539388
-
Ancestral inference in population genetics
-
Griffiths, R., and S. Tavaré, 1994 Ancestral inference in population genetics. Stat. Sci. 9: 307-319
-
(1994)
Stat. Sci
, vol.9
, pp. 307-319
-
-
Griffiths, R.1
Tavaré, S.2
-
6
-
-
0001301442
-
The age of a mutation in a general coalescent tree
-
Griffiths, R., and S. Tavaré, 1998 The age of a mutation in a general coalescent tree. Stoch. Models 14: 273-295
-
(1998)
Stoch. Models
, vol.14
, pp. 273-295
-
-
Griffiths, R.1
Tavaré, S.2
-
7
-
-
84858784460
-
Gene Genealogies
-
Oxford University Press, Oxford
-
Hein, J., M. Schierup, and C. Wiuf, 2005 Gene Genealogies, Variation and Evolution. Oxford University Press, Oxford.
-
(2005)
Variation and Evolution
-
-
Hein, J.1
Schierup, M.2
Wiuf, C.3
-
8
-
-
46449121800
-
Population genetic analysis of shotgun assemblies of genomic sequence from multiple individuals
-
Hellmann, I., Y. Mang, Z. Gu, P. Li, F. De La Vega et al., 2008 Population genetic analysis of shotgun assemblies of genomic sequence from multiple individuals. Genome Res. 18: 1020-1029
-
(2008)
Genome Res
, vol.18
, pp. 1020-1029
-
-
Hellmann, I.1
Mang, Y.2
Gu, Z.3
Li, P.4
de la Vega, F.5
-
9
-
-
0035692320
-
Two-locus sampling distributions and their application
-
Hudson, R., 2001 Two-locus sampling distributions and their application. Genetics 159: 1805-1817
-
(2001)
Genetics
, vol.159
, pp. 1805-1817
-
-
Hudson, R.1
-
10
-
-
0036184745
-
Generating samples under a Wright-Fisher neutral model
-
Hudson, R., 2002 Generating samples under a Wright-Fisher neutral model. Bioinformatics 18: 337-338
-
(2002)
Bioinformatics
, vol.18
, pp. 337-338
-
-
Hudson, R.1
-
11
-
-
61549106577
-
Population genetic inference from resequencing data
-
Jiang, R., S. Tavaré, and P. Marjoram, 2008 Population genetic inference from resequencing data. Genetics 181: 187-197
-
(2008)
Genetics
, vol.181
, pp. 187-197
-
-
Jiang, R.1
Tavaré, S.2
Marjoram, P.3
-
12
-
-
33845412091
-
The coalescent
-
Kingman, J., 1982a The coalescent. Stoch. Proc. Appl. 13: 235-248
-
(1982)
Stoch. Proc. Appl
, vol.13
, pp. 235-248
-
-
Kingman, J.1
-
13
-
-
0002743467
-
Exchangeability and the evolution of large populations
-
in , edited by G. Koch and F. Spizzichino. North-Holland Publishing, Amsterdam
-
Kingman, J., 1982b Exchangeability and the evolution of large populations, pp. 97-112 in Exchangeability in Probability and Statistics, edited by G. Koch and F. Spizzichino. North-Holland Publishing, Amsterdam.
-
(1982)
Exchangeability In Probability and Statistics
, pp. 97-112
-
-
Kingman, J.1
-
14
-
-
0002556819
-
On the genealogy of large populations
-
Kingman, J., 1982c On the genealogy of large populations. J. Appl. Probab. 19A: 27-43
-
(1982)
J. Appl. Probab
, vol.19 A
, pp. 27-43
-
-
Kingman, J.1
-
15
-
-
70349751765
-
Accurate and fast methods to estimate the population mutation rate from error-prone sequences
-
Knudsen, B., and M. Miyamoto, 2009 Accurate and fast methods to estimate the population mutation rate from error-prone sequences. BMC Bioinformatics 10: 247.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 247
-
-
Knudsen, B.1
Miyamoto, M.2
-
16
-
-
0029027992
-
Estimating effective population size and mutation rate from sequence data using Metropolis-Hastings sampling
-
Kuhner, M. K., J. Yamato, and J. Felsenstein, 1995 Estimating effective population size and mutation rate from sequence data using Metropolis-Hastings sampling. Genetics 140: 1421-1430
-
(1995)
Genetics
, vol.140
, pp. 1421-1430
-
-
Kuhner, M.K.1
Yamato, J.2
Felsenstein, J.3
-
17
-
-
67149117126
-
Discovery of rare variants via sequencing: Implications for the design of complex trait association studies
-
e1000481
-
Li, B., and S. Leal, 2009 Discovery of rare variants via sequencing: implications for the design of complex trait association studies. PLoS Genet. 5: e1000481.
-
(2009)
PLoS Genet
, vol.5
-
-
Li, B.1
Leal, S.2
-
18
-
-
67649884743
-
Fast and accurate short read alignment with burrowswheeler transform
-
Li, H., and R. Durbin, 2009 Fast and accurate short read alignment with burrowswheeler transform. Bioinformatics 25: 1754-1760
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
19
-
-
55549097836
-
Mapping short DNA sequencing reads and calling variants using mapping quality scores
-
Li, H., J. Ruan, and R. Durbin, 2008 Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Res. 18: 1851-1858
-
(2008)
Genome Res
, vol.18
, pp. 1851-1858
-
-
Li, H.1
Ruan, J.2
Durbin, R.3
-
20
-
-
0347361674
-
Modelling linkage disequilibrium, and identifying recombination hotspots using SNP data
-
Li, N., and M. Stephens, 2003 Modelling linkage disequilibrium, and identifying recombination hotspots using SNP data. Genetics 165: 2213-2233
-
(2003)
Genetics
, vol.165
, pp. 2213-2233
-
-
Li, N.1
Stephens, M.2
-
21
-
-
40049104732
-
SOAP: Short oligonucleotide alignment program
-
Li, R., Y. Li, K. Kristiansen, and J. Wang, 2008 SOAP: short oligonucleotide alignment program. Bioinformatics 24: 713-714
-
(2008)
Bioinformatics
, vol.24
, pp. 713-714
-
-
Li, R.1
Li, Y.2
Kristiansen, K.3
Wang, J.4
-
22
-
-
79957951017
-
Low coverage sequencing: Implications for the design of complex trait association studies
-
Li, Y., C. Sidore, H. M. Kang, M. Boehnke, and G. Abecasis, 2011 Low coverage sequencing: implications for the design of complex trait association studies. Genome Res. 21: 940-951
-
(2011)
Genome Res
, vol.21
, pp. 940-951
-
-
Li, Y.1
Sidore, C.2
Kang, H.M.3
Boehnke, M.4
Abecasis, G.5
-
23
-
-
70349956433
-
Finding the missing heritability of complex diseases
-
Manolio, T., F. Collins, N. Cox, D. Goldstein, L. Hindorff et al., 2009 Finding the missing heritability of complex diseases. Nature 461: 747-753
-
(2009)
Nature
, vol.461
, pp. 747-753
-
-
Manolio, T.1
Collins, F.2
Cox, N.3
Goldstein, D.4
Hindorff, L.5
-
24
-
-
77956295988
-
The genome analysis toolkit: A mapreduce framework for analyzing next-generation DNA sequencing data
-
McKenna, A., M. Hanna, E. Banks, A. Sivachenko, K. Cibulskis et al., 2010 The genome analysis toolkit: a mapreduce framework for analyzing next-generation DNA sequencing data. Genome Res. 20: 1297-1303
-
(2010)
Genome Res
, vol.20
, pp. 1297-1303
-
-
McKenna, A.1
Hanna, M.2
Banks, E.3
Sivachenko, A.4
Cibulskis, K.5
-
25
-
-
33644974019
-
A fast and flexible statistical model for large-scale population genotype data: Applications to inferring missing genotypes and haplotypic phase
-
Scheet, P., and M. Stephens, 2006 A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phase. Am. J. Hum. Genet. 78: 629-644
-
(2006)
Am. J. Hum. Genet
, vol.78
, pp. 629-644
-
-
Scheet, P.1
Stephens, M.2
-
26
-
-
53649106195
-
Next-generation DNA sequencing
-
Shendure, J., and H. Ji, 2008 Next-generation DNA sequencing. Nat. Biotechnol. 26: 1135-1145
-
(2008)
Nat. Biotechnol
, vol.26
, pp. 1135-1145
-
-
Shendure, J.1
Ji, H.2
-
28
-
-
0016491430
-
On the number of segregating sites in genetical models without recombination
-
Watterson, G. A., 1975 On the number of segregating sites in genetical models without recombination. Theor. Popul. Biol. 7: 256-276.
-
(1975)
Theor. Popul. Biol
, vol.7
, pp. 256-276
-
-
Watterson, G.A.1
|