Isolation of 13 polymorphic microsatellite loci for slimy sculpin (Cottus cognatus)

Conservation Genetics Resources

Volumn 1, Issue 1, 2009, Pages 429-432

  Fujishin, Lorissa M ^a   Keith Barker, F ^a   Huff, David D ^a   Miller, Loren M ^a  

^a UNIVERSITY OF MINNESOTA   (United States)

Author keywords

Cottus; Enrichment; Microsatellite; Slimy sculpin

Indexed keywords

COTTUS; COTTUS BAIRDII; COTTUS COGNATUS;

EID: 80053980578     PISSN: 18777252     EISSN: 18777260     Source Type: Journal    
DOI: 10.1007/s12686-009-9099-3     Document Type: Article

References (13)

1. Adams SB, Schmetterling DA (2007) Freshwater sculpins: phylogenetics to ecology. Trans Am Fish Soc 136:1736-1741
2. Boutin-Ganache I, Raposo M, Raymond M, Deschepper CF (2001) M13-tailed primers improve the readability and usability of microsatellite analyses performed with two different allelesizing methods. BioTechniques 31:25-28
3. Englbrecht CC, Largiader CR, Hanfling B, Tautz D (1999) Isolation and characterization of polymorphic microsatellite loci in the European bullhead Cottus gobio L. (Osteichthyes) and their applicability to related taxa. Mol Ecol 8:1957-1969
4. Englbrecht CC, Freyhof J, Nolte A, Rassmann K, Schliewen U, Tautz D (2000) Phylogeography of the bullhead Cottus gobio (pisces: Teleostei: Cottidae) suggests a pre-Pleistocene origin of the major central European populations. Mol Ecol 9:709-722
5. Fiumera AC, Porter BA, Grossman GD, Avise JC (2002) Intensive genetic assessment of the mating system and reproductive success in a semi-closed population of the mottled sculpin, Cottus bairdi. Mol Ecol 11:2367-2377
6. Glenn TC, Schable NA (2005) Isolation microsatellite DNA loci. Methods Enzymol 395:202-222
7. Kalinowski ST (2006) HW-QUICKCHECK: an easy-to-use computer program for checking genotypes for agreement with Hardy- Weinberg expectations. Mol Ecol Notes 6:974-979
8. Meyer KA, Schill DJ, Campbell MR, Kozfkay CC (2008) Distribution, abundance, and genetic population structure of Wood River sculpin, Cottus leiopomus. West N Am Nat 68:508-520
9. Nolte AW, Stemshorn KC, Tautz D (2005) Direct cloning of microsatellite loci from Cottus gobio through a simplified enrichment procedure. Mol Ecol Notes 5:628-636
10. Oosterhout CV, Hutchinson WF, Wills DPM, Shipley P (2004) Micro-Checker: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4:535-538
11. Raymond M, Rousset F (1995) GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. J Hered 86:248-249
12. Rozen S, Skaletsky HJ (2000) Primer3 on the WWW for general users and for biologist programmers. In: Krawetz S, Misnener S (eds) Bioinformatics methods and protocols: methods in molecular biology. Humana Press, Totowa, NJ, pp 365-386
13. Sweigart A (2009) Sculpin hybrid zones: natural laboratories for the early stages of speciation. Mol Ecol 18:2547-2548