Resistance, resilience and recovery: Aquatic bacterial dynamics after water column disturbance

Environmental Microbiology

Volumn 13, Issue 10, 2011, Pages 2752-2767

  Shade, Ashley ^a,d   Read, Jordan S ^b   Welkie, David G ^a   Kratz, Timothy K ^c   Wu, Chin H ^b   McMahon, Katherine D ^a,b  

^a UNIVERSITY OF WISCONSIN MADISON   (United States)

^b Wisconsin Electric Machines and Power Electronics Consortium   (United States)

^c University of Wisconsin   (United States)

^d YALE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

OXYGEN;

ARTICLE; BACTERIUM; CHEMISTRY; CLASSIFICATION; GROWTH, DEVELOPMENT AND AGING; LAKE; LIMNOLOGY; METHODOLOGY; MICROBIOLOGY; WATER FLOW;

BACTERIA; LAKES; LIMNOLOGY; OXYGEN; WATER MICROBIOLOGY; WATER MOVEMENTS;

BACTERIA (MICROORGANISMS);

EID: 80053650957     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/j.1462-2920.2011.02546.x     Document Type: Article

References (40)

1. Allison, G. (2004) The influence of species diversity and stress intensity on community resistance and resilience. Ecol Monogr 74: 117-134.
2. Allison, S.D., and Martiny, J.B.H. (2008) Resistance, resilience, and redundancy in microbial communities. Proc Natl Acad Sci USA 105: 11512-11519.
3. Botton, S., van Heusden, M., Parsons, J.R., Smidt, H., and van Straalen, N. (2006) Resilience of microbial systems towards disturbances. Crit Rev Microbiol 32: 101-112.
4. Clarke, K.R., and Gorley, R.N. (2006) PRIMER V6: User Manual/Tutorial. Plymouth, UK: PRIMER-E.
5. Clarke, K.R., and Warwick, R.M. (2001) Change in Marine Communities: An Approach to Statistical Analysis and Interpretation. Plymouth, UK: PRIMER-E.
6. Diehl, S., Berger, S., Ptacnik, R., and Wild, A. (2002) Phytoplankton, light, and nutrients in a gradient of mixing depths: field experiments. Ecology 83: 399-411.
7. Fenchel, T. (2005) Cosmopolitan microbes and their 'cryptic' species. Aquat Microb Ecol 41: 49-54.
8. Fenchel, T., and Finlay, B. (2008) Oxygen and the spatial structure of microbial communities. Biol Rev Camb Philos Soc 83: 553-569.
9. Finlay, B.J., and Esteban, G.F. (2004) Ubiquitous dispersal of free-living microorganisms. In Microbial Diversity and Bioprospecting. Bull, A.T. (ed.). Washington DC, USA: ASM Press, pp. 216-224.
10. Frost, T.M., Fischer, J.M., Klug, J.L., Arnott, S.E., and Montz, P.K. (2006) Trajectories of zooplankton recovery in the Little Rock Lake whole-lake acidification experiment. Ecol Appl 16: 353-367.
11. Grossart, H., Jezbera, J., Hor ák, K., Hutalle, K., Buck, U., and Šimek, K. (2008) Top down and bottom up induced shifts in bacterial abundance, production and community composition in an experimentally divided humic lake. Environ Microbiol 10: 635-652.
12. Hambright, K.D., and Zohary, T. (2000) Phytoplankton species diversity control through competitive exclusion and physical disturbances. Limnol Oceanogr 45: 110-122.
13. Hollibaugh, J.T., Wong, P.S., Bano, N., Pak, S.K., Prager, E.M., and Orrego, C. (2001) Stratification of microbial assemblages in Mono Lake, California, and response to a mixing event. Hydrobiologia 466: 45-60.
14. Huisman, J., and Weissing, F.J. (1999) Biodiversity of plankton by species oscillations and chaos. Nature 402: 407-410.
15. Huisman, J., Sharples, J., Stroom, J.M., Visser, P.M., Kardinaal, W.E.A., Verspagen, J.M.H., and Sommeijer, B. (2004) Changes in turbulent mixing shift competition for light between phytoplankton species. Ecology 85: 2960-2970.
16. Hutchinson, G. (1961) The paradox of the plankton. Am Nat 95: 137-145.
17. Jones, S.E., Chiu, C.-Y., Kratz, T.K., Wu, J.-T., Shade, A., and McMahon, K.D. (2008) Typhoons initiate predictable change in aquatic bacterial communities. Limnol Oceanogr 53: 1319-1326.
18. Kent, A., Jones, S., Lauster, G., Graham, J., Newton, R., and McMahon, K. (2006) Experimental manipulations of microbial food web interactions in a humic lake: shifting biological drivers of bacterial community structure. Environ Microbiol 8: 1448-1459.
19. Kent, A.D., Yannarell, A.C., Rusak, J.A., Triplett, E.W., and McMahon, K.D. (2007) Synchrony in aquatic microbial community dynamics. ISME J 1: 38-47.
20. Lehours, A.C., Bardot, C., Thenot, A., Debroas, D., and Fonty, G. (2005) Anaerobic microbial communities in Lake Pavin, a unique meromictic lake in France. Appl Environ Microbiol 71: 7389-7400.
21. Lehours, A.C., Bardot, C., Pelisson, P.F., Guedon, A., Pesce, S., Demeure, G., etal. (2009) Successional changes in bacterial community assemblages following anoxia in the hypolimnion of a eutrophic lake. Aquat Microb Ecol 54: 71-82.
22. Miller, A.D., and Chesson, P. (2009) Coexistence in disturbance-prone communities: how a resistance-resilience trade-off generates coexistence via the storage effect. Am Nat 173: E30-E43.
23. Nelson, C.E. (2009) Phenology of high-elevation pelagic bacteria: the roles of meteorologic variability, catchment inputs and thermal stratification in structuring communities. ISME J 3: 13-30.
24. Oksanen, J., Roeland, K., Legendre, P., O'Hara, B., Simpson, G.L., Solymos, P., etal. (2008) vegan: community ecology package. R package version 1.15-1.
25. Pannard, A., Bormans, M., Lefebvre, S., Claquin, P., and Lagadeuc, Y. (2007) Phytoplankton size distribution and community structure: influence of nutrient input and sedimentary loss. J Plankton Res 29: 583-598.
26. Pannard, A., Bormans, M., and Lagadeuc, Y. (2008) Phytoplankton species turnover controlled by physical forcing at different time scales. Can J Fish Aquat Sci 65: 47-60.
27. Pimm, S.L. (1984) The complexity and stability of ecosystems. Nature 307: 321-326.
28. R Development Core Team (2005) R: A Language and Environment for Statistical Computing. Vienna, Austria: R Foundation for Statistical Computing.
29. Regel, R.H., Brookes, J.D., Ganf, G.G., and Griffiths, R. (2004) The influence of experimentally generated turbulence on the Mash01 unicellular Microcystis aeruginosa strain. Hydrobiologia 517: 107-120.
30. Sanford, L.P. (1997) Turbulent mixing in experimental ecosystem studies. Mar Ecol Prog Ser 161: 265-293.
31. Shade, A., Kent, A.D., Jones, S.E., Newton, R.J., Triplett, E.W., and McMahon, K.D. (2007) Interannual dynamics and phenology of bacterial communities in a eutrophic lake. Limnol Oceanogr 52: 487-494.
32. Shade, A., Jones, S.E., and McMahon, K.D. (2008) The influence of habitat heterogeneity on freshwater bacterial community composition and dynamics. Environ Microbiol 10: 1057-1067.
33. Shade, A., Chiu, C., and McMahon, K. (2010a) Seasonal and episodic lake mixing stimulate differential planktonic bacterial dynamics. Microb Ecol 59: 546-554.
34. Shade, A., Chiu, C., and McMahon, K. (2010b) Differential bacterial dynamics promote emergent community robustness to lake mixing: an epilimnion to hypolimnion transplant experiment. Environ Microbiol 12: 455-466.
35. Simek, K., Hornák, K., Jezbera, J., Nedoma, J., Znachor, P., Hejzlar, J., and Sed'a, J. (2008) Spatio-temporal patterns of bacterioplankton production and community composition related to phytoplankton composition and protistan bacterivory in a dam reservoir. Aquat Microb Ecol 51: 249-262.
36. Smith, E.M., and Prairie, Y.T. (2004) Bacterial metabolism and growth efficiency in lakes: the importance of phosphorus availability. Limnol Oceanogr 49: 137-147.
37. Warner, R.R., and Chesson, P.L. (1985) Coexistence mediated by recruitment fluctuations - a field guide to the storage effect. Am Nat 125: 769-787.
38. Weithoff, G., Lorke, A., and Walz, N. (2000) Effects of water-column mixing on bacteria, phytoplankton, and rotifers under different levels of herbivory in a shallow eutrophic lake. Oecologia 125: 91-100.
39. Wetzel, R.G. (2001) Limnology: Lake and River Ecosystems. San Diego, CA, USA: Academic Press.
40. Yannarell, A.C., Steppe, T.F., and Paerl, H.W. (2007) Disturbance and recovery of microbial community structure and function following Hurricane Frances. Environ Microbiol 9: 576-583.