-
1
-
-
2542637935
-
Apomixis technology development-virgin births in farmers' fields?
-
10.1038/nbt976, 15175691
-
Spillane C, Curtis MD, Grossniklaus U. Apomixis technology development-virgin births in farmers' fields?. Nature Biotechnology 2004, 22:687-691. 10.1038/nbt976, 15175691.
-
(2004)
Nature Biotechnology
, vol.22
, pp. 687-691
-
-
Spillane, C.1
Curtis, M.D.2
Grossniklaus, U.3
-
2
-
-
0035935721
-
Multiple routes to asexuality in an aphid species
-
Delmotte F, Letterme M, Bonhomme J, Rispe C, Simon JC. Multiple routes to asexuality in an aphid species. Pro R Soc Lond B 2001, 268:2291-2299.
-
(2001)
Pro R Soc Lond B
, vol.268
, pp. 2291-2299
-
-
Delmotte, F.1
Letterme, M.2
Bonhomme, J.3
Rispe, C.4
Simon, J.C.5
-
3
-
-
0038523729
-
Phylogenetic relationships between parthenogens and their sexual relatives: the possible routes to parthenogenesis in animals
-
Simon JC, Delmotte F, Rispe C, Crease T. Phylogenetic relationships between parthenogens and their sexual relatives: the possible routes to parthenogenesis in animals. Biol J Linn Soc Lond 2003, 79:151-163.
-
(2003)
Biol J Linn Soc Lond
, vol.79
, pp. 151-163
-
-
Simon, J.C.1
Delmotte, F.2
Rispe, C.3
Crease, T.4
-
4
-
-
0032694941
-
Molecular systematics and evolution of Arabidopsis and Arabis
-
Koch M, Bishop J, Mitchell-Olds T. Molecular systematics and evolution of Arabidopsis and Arabis. Plant Biology 1999, 1:529-537.
-
(1999)
Plant Biology
, vol.1
, pp. 529-537
-
-
Koch, M.1
Bishop, J.2
Mitchell-Olds, T.3
-
5
-
-
0003072927
-
Cytological and embryological studies in the amphi-apomictic Arabis holboellii complex
-
Böcher TW. Cytological and embryological studies in the amphi-apomictic Arabis holboellii complex. Det Kongelige Danske Videnskabernes Selskab 1951, 6:1-59.
-
(1951)
Det Kongelige Danske Videnskabernes Selskab
, vol.6
, pp. 1-59
-
-
Böcher, T.W.1
-
6
-
-
0037357446
-
Multiple hybrid formation in natural populations: concerted evolution of the internal transcribed spacer of nuclear ribosomal DNA (ITS) in North American Arabis divaricarpa (Brassicaceae)
-
10.1093/molbev/msg046, 12644554
-
Koch MA, Dobeš C, Mitchell-Olds T. Multiple hybrid formation in natural populations: concerted evolution of the internal transcribed spacer of nuclear ribosomal DNA (ITS) in North American Arabis divaricarpa (Brassicaceae). Mol. Biol. Evol 2003, 20:338-350. 10.1093/molbev/msg046, 12644554.
-
(2003)
Mol. Biol. Evol
, vol.20
, pp. 338-350
-
-
Koch, M.A.1
Dobeš, C.2
Mitchell-Olds, T.3
-
7
-
-
65649094049
-
Phylogeographic structure of the chloroplast DNA gene pool in North American Boechera - A genus and continental-wide perspective
-
10.1016/j.ympev.2009.03.016, 19328239
-
Kiefer C, Dobeš C, Sharbel TF, Koch MA. Phylogeographic structure of the chloroplast DNA gene pool in North American Boechera - A genus and continental-wide perspective. Molecular Phylogenetics and Evolution 2009, 52:303-311. 10.1016/j.ympev.2009.03.016, 19328239.
-
(2009)
Molecular Phylogenetics and Evolution
, vol.52
, pp. 303-311
-
-
Kiefer, C.1
Dobeš, C.2
Sharbel, T.F.3
Koch, M.A.4
-
8
-
-
0038676592
-
Apomixis: A developmental perspective
-
10.1146/annurev.arplant.54.110901.160842, 14503003
-
Koltunow AM, Grossniklaus U. Apomixis: A developmental perspective. Annu Rev Plant Biol 2003, 54:547-574. 10.1146/annurev.arplant.54.110901.160842, 14503003.
-
(2003)
Annu Rev Plant Biol
, vol.54
, pp. 547-574
-
-
Koltunow, A.M.1
Grossniklaus, U.2
-
9
-
-
0030970301
-
Asynchronous expression of duplicate genes in angiosperms may cause apomixis, bispory, tetraspory, and polyembryony
-
Carman JG. Asynchronous expression of duplicate genes in angiosperms may cause apomixis, bispory, tetraspory, and polyembryony. Biol J Linn Soc Lond 1997, 61:51-94.
-
(1997)
Biol J Linn Soc Lond
, vol.61
, pp. 51-94
-
-
Carman, J.G.1
-
10
-
-
9644272448
-
Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana
-
10.1038/ng1478, 15565108
-
Allen E, Xie Z, Gustafson AM, Sung GH, Spatafora JW, Carrington JC. Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana. Nat Genet 2004, 36:1282-1290. 10.1038/ng1478, 15565108.
-
(2004)
Nat Genet
, vol.36
, pp. 1282-1290
-
-
Allen, E.1
Xie, Z.2
Gustafson, A.M.3
Sung, G.H.4
Spatafora, J.W.5
Carrington, J.C.6
-
11
-
-
57049169777
-
Evolution of Arabidopsis thaliana microRNAs from random sequences
-
10.1261/rna.1149408, 2590950, 18952822
-
Felippes FF, Schneeberger K, Dezulian T, Hudson DH, Weigel D. Evolution of Arabidopsis thaliana microRNAs from random sequences. RNA 2008, 14(12):2455-2459. 10.1261/rna.1149408, 2590950, 18952822.
-
(2008)
RNA
, vol.14
, Issue.12
, pp. 2455-2459
-
-
Felippes, F.F.1
Schneeberger, K.2
Dezulian, T.3
Hudson, D.H.4
Weigel, D.5
-
12
-
-
34347216713
-
MicroRNAs and short-interfering RNAs in plants
-
Sunkar R, Zhu JK. MicroRNAs and short-interfering RNAs in plants. J Integr Plant Biol 2007, 49:817-826.
-
(2007)
J Integr Plant Biol
, vol.49
, pp. 817-826
-
-
Sunkar, R.1
Zhu, J.K.2
-
13
-
-
61349171237
-
Biotic and abiotic stress down-regulate miR398 expression in Arabidopsis
-
10.1007/s00425-009-0889-3, 19148671
-
Jagadeeswaran G, Saini A, Sunkar R. Biotic and abiotic stress down-regulate miR398 expression in Arabidopsis. Planta 2009, 229:1009-1014. 10.1007/s00425-009-0889-3, 19148671.
-
(2009)
Planta
, vol.229
, pp. 1009-1014
-
-
Jagadeeswaran, G.1
Saini, A.2
Sunkar, R.3
-
14
-
-
2442681764
-
Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step
-
10.1101/gad.1201204, 415642, 15131083
-
Chapman EJ, Prokhnevsky AI, Gopinath K, Dolja VV, Carrington JC. Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step. Genes and Development 2004, 18(10):1179-1186. 10.1101/gad.1201204, 415642, 15131083.
-
(2004)
Genes and Development
, vol.18
, Issue.10
, pp. 1179-1186
-
-
Chapman, E.J.1
Prokhnevsky, A.I.2
Gopinath, K.3
Dolja, V.V.4
Carrington, J.C.5
-
15
-
-
4444363152
-
MicroRNA control of PHABULOSA in leaf development: importance of pairing to the microRNA 5' region
-
10.1038/sj.emboj.7600340, 514513, 15282547
-
Mallory AC, Reinhart BJ, Jones-Rhoades MW. MicroRNA control of PHABULOSA in leaf development: importance of pairing to the microRNA 5' region. The EMBO Journal 2004, 23(16):3356-3364. 10.1038/sj.emboj.7600340, 514513, 15282547.
-
(2004)
The EMBO Journal
, vol.23
, Issue.16
, pp. 3356-3364
-
-
Mallory, A.C.1
Reinhart, B.J.2
Jones-Rhoades, M.W.3
-
16
-
-
0141493493
-
Control of leaf morphogenesis by microRNAs
-
10.1038/nature01958, 12931144
-
Palatnik JF, Allen E, Wu X, Schommer C, Schwab R, Carrington JC, Weigel D. Control of leaf morphogenesis by microRNAs. Nature 2003, 425:257-263. 10.1038/nature01958, 12931144.
-
(2003)
Nature
, vol.425
, pp. 257-263
-
-
Palatnik, J.F.1
Allen, E.2
Wu, X.3
Schommer, C.4
Schwab, R.5
Carrington, J.C.6
Weigel, D.7
-
17
-
-
42549136362
-
Novel and nodulation-regulated microRNAs in soybean roots
-
Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Oliver Y. Novel and nodulation-regulated microRNAs in soybean roots. BMC Genomics 2009, 9:160.
-
(2009)
BMC Genomics
, vol.9
, pp. 160
-
-
Subramanian, S.1
Fu, Y.2
Sunkar, R.3
Barbazuk, W.B.4
Zhu, J.K.5
Oliver, Y.6
-
18
-
-
20444485252
-
The Arabidopsis GAMYBlike genes, MYB33 and MYB65, are MicroRNA-regulated genes that redundantly facilitate anther development
-
10.1105/tpc.104.027920, 1069693, 15722475
-
Millar AA, Gubler F. The Arabidopsis GAMYBlike genes, MYB33 and MYB65, are MicroRNA-regulated genes that redundantly facilitate anther development. Plant Cell 2005, 17(3):705-721. 10.1105/tpc.104.027920, 1069693, 15722475.
-
(2005)
Plant Cell
, vol.17
, Issue.3
, pp. 705-721
-
-
Millar, A.A.1
Gubler, F.2
-
19
-
-
77950086568
-
Control of female gamete formation by a small RNA pathway in Arabidopsis
-
Olmedo-Monfil V, Dura'n-Figueroa N, Arteaga-Va'zquez M, Demesa-Are'valo E, Autran D, Grimanelli D, Slotkin RK, Martienssen RA, Vielle-Calzada JP. Control of female gamete formation by a small RNA pathway in Arabidopsis. Nature 2010,
-
(2010)
Nature
-
-
Olmedo-Monfil, V.1
Dura'n-Figueroa, N.2
Arteaga-Va'zquez, M.3
Demesa-Are'valo, E.4
Autran, D.5
Grimanelli, D.6
Slotkin, R.K.7
Martienssen, R.A.8
Vielle-Calzada, J.P.9
-
20
-
-
2942672580
-
Computational identification of plant microRNAs and their targets, including a stress-induced miRNA
-
10.1016/j.molcel.2004.05.027, 15200956
-
Rhoades MW, Bartel DP. Computational identification of plant microRNAs and their targets, including a stress-induced miRNA. Mol Cell 2004, 14:787-799. 10.1016/j.molcel.2004.05.027, 15200956.
-
(2004)
Mol Cell
, vol.14
, pp. 787-799
-
-
Rhoades, M.W.1
Bartel, D.P.2
-
21
-
-
0742323351
-
The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in microRNA-mediated gene regulation
-
10.1073/pnas.0307969100, 327156, 14722360
-
Han MH, Goud S, Song L, Fedoroff N. The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in microRNA-mediated gene regulation. Proc Natl Acad Sci USA 2004, 101:1093-1098. 10.1073/pnas.0307969100, 327156, 14722360.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 1093-1098
-
-
Han, M.H.1
Goud, S.2
Song, L.3
Fedoroff, N.4
-
22
-
-
1542350745
-
The nuclear dsRNA binding protein HYL1 is required for microRNA accumulation and plant development, but not posttranscriptional transgene silencing
-
Vazquez F, Gasciolli V, Crete P, Vaucheret H. The nuclear dsRNA binding protein HYL1 is required for microRNA accumulation and plant development, but not posttranscriptional transgene silencing. Curr Biol 2004, 14:346-351.
-
(2004)
Curr Biol
, vol.14
, pp. 346-351
-
-
Vazquez, F.1
Gasciolli, V.2
Crete, P.3
Vaucheret, H.4
-
23
-
-
33748314483
-
SERRATE is a novel nuclear regulator in primary microRNA processing in Arabidopsis
-
10.1111/j.1365-313X.2006.02835.x, 16889646
-
Yang L, Liu Z, Lu F, Dong A, Huang H. SERRATE is a novel nuclear regulator in primary microRNA processing in Arabidopsis. Plant J 2006, 47:841-850. 10.1111/j.1365-313X.2006.02835.x, 16889646.
-
(2006)
Plant J
, vol.47
, pp. 841-850
-
-
Yang, L.1
Liu, Z.2
Lu, F.3
Dong, A.4
Huang, H.5
-
24
-
-
2442650370
-
The action of ARGONAUTE1 in the miRNA pathway and its regulation by the miRNA pathway are crucial for plant development
-
10.1101/gad.1201404, 21998864
-
Vaucheret H, Vazquez F, Crete P, Bartel DP. The action of ARGONAUTE1 in the miRNA pathway and its regulation by the miRNA pathway are crucial for plant development. Genes & Dev 2004, 18:1187-1197. 10.1101/gad.1201404, 21998864.
-
(2004)
Genes & Dev
, vol.18
, pp. 1187-1197
-
-
Vaucheret, H.1
Vazquez, F.2
Crete, P.3
Bartel, D.P.4
-
25
-
-
23844550243
-
Arabidopsis ARGONAUTE1 is an RNA slicer that selectively recruits microRNAs and short interfering RNAs
-
10.1073/pnas.0505461102, 1182554, 16081530
-
Baumberger N, Baulcombe DC. Arabidopsis ARGONAUTE1 is an RNA slicer that selectively recruits microRNAs and short interfering RNAs. Proc Natl Acad Sci USA 2005, 102:11928-11933. 10.1073/pnas.0505461102, 1182554, 16081530.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 11928-11933
-
-
Baumberger, N.1
Baulcombe, D.C.2
-
26
-
-
0037162702
-
Prediction of plant microRNA targets
-
10.1016/S0092-8674(02)00863-2, 12202040
-
Rhoades MW, Reinhart BJ, Lim LP, Burge CB, Bartel B, Bartel DP. Prediction of plant microRNA targets. Cell 2002, 110:513-520. 10.1016/S0092-8674(02)00863-2, 12202040.
-
(2002)
Cell
, vol.110
, pp. 513-520
-
-
Rhoades, M.W.1
Reinhart, B.J.2
Lim, L.P.3
Burge, C.B.4
Bartel, B.5
Bartel, D.P.6
-
27
-
-
1642366133
-
A miRNA as a translational repressor of APETALA2 in Arabidopsis flower development
-
10.1126/science.1088060, 12893888
-
Chen X. A miRNA as a translational repressor of APETALA2 in Arabidopsis flower development. Science 2004, 303:2022-2025. 10.1126/science.1088060, 12893888.
-
(2004)
Science
, vol.303
, pp. 2022-2025
-
-
Chen, X.1
-
28
-
-
45849122499
-
Widespread translational inhibition by plant miRNAs and siRNAs
-
10.1126/science.1159151, 18483398
-
Brodersen P, Sakvarelidze-Achard L, Bruun-Rasmussen M, Dunoyer P, Yamamoto YY, Sieburth L, Voinnet O. Widespread translational inhibition by plant miRNAs and siRNAs. Science 2008, 320(5880):1185-90. 10.1126/science.1159151, 18483398.
-
(2008)
Science
, vol.320
, Issue.5880
, pp. 1185-1190
-
-
Brodersen, P.1
Sakvarelidze-Achard, L.2
Bruun-Rasmussen, M.3
Dunoyer, P.4
Yamamoto, Y.Y.5
Sieburth, L.6
Voinnet, O.7
-
29
-
-
33745156778
-
Identification of 188 conserved maize microRNAs and their targets
-
Zhang B, Pan X, Anderson TA. Identification of 188 conserved maize microRNAs and their targets. FEBS J 2006, 580(15):3753-3762a.
-
(2006)
FEBS J
, vol.580
, Issue.15
-
-
Zhang, B.1
Pan, X.2
Anderson, T.A.3
-
30
-
-
49049102277
-
Bioinformatic identification and expression analysis of new microRNAs from Medicago truncatula
-
10.1016/j.bbrc.2008.07.083, 18662674
-
Zhou ZS, Huang SQ, Yang ZM. Bioinformatic identification and expression analysis of new microRNAs from Medicago truncatula. Biochemical and Biophysical Research Communications 2008, 374(3):538-542. 10.1016/j.bbrc.2008.07.083, 18662674.
-
(2008)
Biochemical and Biophysical Research Communications
, vol.374
, Issue.3
, pp. 538-542
-
-
Zhou, Z.S.1
Huang, S.Q.2
Yang, Z.M.3
-
31
-
-
33845688601
-
A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana
-
10.1101/gad.1476406, 21998864
-
Rajagopalan R, Vaucheret H, Trejo J, Bartel DP. A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana. Genes & Dev 2006, 20:3407-3425. 10.1101/gad.1476406, 21998864.
-
(2006)
Genes & Dev
, vol.20
, pp. 3407-3425
-
-
Rajagopalan, R.1
Vaucheret, H.2
Trejo, J.3
Bartel, D.P.4
-
32
-
-
34547115664
-
High-throughput sequencing of Arabidopsis microRNAs: Evidence for frequent birth and death of MIRNA genes
-
10.1371/journal.pone.0000219, 1790633, 17299599
-
Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC. High-throughput sequencing of Arabidopsis microRNAs: Evidence for frequent birth and death of MIRNA genes. PLoS ONE 2007, 2:e219. 10.1371/journal.pone.0000219, 1790633, 17299599.
-
(2007)
PLoS ONE
, vol.2
-
-
Fahlgren, N.1
Howell, M.D.2
Kasschau, K.D.3
Chapman, E.J.4
Sullivan, C.M.5
Cumbie, J.S.6
Givan, S.A.7
Law, T.F.8
Grant, S.R.9
Dangl, J.L.10
Carrington, J.C.11
-
33
-
-
39549115890
-
Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
-
10.1186/gb-2007-8-6-r96, 2394755, 17543110
-
Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, and Sun Q. Cloning and characterization of microRNAs from wheat (Triticum aestivum L.). Genome Biol 2007, 8:R96. 10.1186/gb-2007-8-6-r96, 2394755, 17543110.
-
(2007)
Genome Biol
, vol.8
-
-
Yao, Y.1
Guo, G.2
Ni, Z.3
Sunkar, R.4
Du, J.5
Zhu, J.K.6
and Sun, Q.7
-
34
-
-
53549106068
-
Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening
-
10.1101/gr.080127.108, 2556272, 18653800
-
Moxon S, Jing R, Szittya G, Schwach F, Pilcher RLR, Moulton V, Dalmay T. Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening. Genome Res 2008, 18:1602-1609. 10.1101/gr.080127.108, 2556272, 18653800.
-
(2008)
Genome Res
, vol.18
, pp. 1602-1609
-
-
Moxon, S.1
Jing, R.2
Szittya, G.3
Schwach, F.4
Pilcher, R.L.R.5
Moulton, V.6
Dalmay, T.7
-
35
-
-
4043074968
-
Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis
-
10.1105/tpc.104.022830, 519194, 15258262
-
Sunkar R, Zhu JK. Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis. Plant Cell 2004, 16:2001-2019. 10.1105/tpc.104.022830, 519194, 15258262.
-
(2004)
Plant Cell
, vol.16
, pp. 2001-2019
-
-
Sunkar, R.1
Zhu, J.K.2
-
36
-
-
22144464033
-
Cloning and characterization of microRNAs from rice
-
10.1105/tpc.105.031682, 1091763, 15805478
-
Sunkar R, Girke T, Jain PK, Zhu JK. Cloning and characterization of microRNAs from rice. Plant Cell 2005, 17:1397-1411. 10.1105/tpc.105.031682, 1091763, 15805478.
-
(2005)
Plant Cell
, vol.17
, pp. 1397-1411
-
-
Sunkar, R.1
Girke, T.2
Jain, P.K.3
Zhu, J.K.4
-
37
-
-
79954455567
-
Overview of the potential of microRNAs and their target gene detection for cassava (Manihot esculenta) improvement
-
Amiteye S, Corral JM, Sharbel TF. Overview of the potential of microRNAs and their target gene detection for cassava (Manihot esculenta) improvement. African Journal of Biotechnology 2011, 10(14):2562-2573.
-
(2011)
African Journal of Biotechnology
, vol.10
, Issue.14
, pp. 2562-2573
-
-
Amiteye, S.1
Corral, J.M.2
Sharbel, T.F.3
-
38
-
-
34548141843
-
MiR172 regulates stem cell fate and defines the inner boundary of APETALA3 and PISTILLATA expression domain in Arabidopsis floral meristems
-
10.1111/j.1365-313X.2007.03181.x, 2629596, 17573799
-
Zhao L, Kim Y, Dinh TT, Chen X. miR172 regulates stem cell fate and defines the inner boundary of APETALA3 and PISTILLATA expression domain in Arabidopsis floral meristems. The Plant Journal 2007, 51:840-849. 10.1111/j.1365-313X.2007.03181.x, 2629596, 17573799.
-
(2007)
The Plant Journal
, vol.51
, pp. 840-849
-
-
Zhao, L.1
Kim, Y.2
Dinh, T.T.3
Chen, X.4
-
39
-
-
66249111492
-
Molecular signatures of apomictic and sexual ovules in the Boechera holboellii complex
-
10.1111/j.1365-313X.2009.03826.x, 19220792
-
Sharbel TF, Voigt ML, Corral JM, Thiel T, Varshney A, Kumlehn J, Vogel H, Rotter B. Molecular signatures of apomictic and sexual ovules in the Boechera holboellii complex. Plant J 2009, 58:870-882. 10.1111/j.1365-313X.2009.03826.x, 19220792.
-
(2009)
Plant J
, vol.58
, pp. 870-882
-
-
Sharbel, T.F.1
Voigt, M.L.2
Corral, J.M.3
Thiel, T.4
Varshney, A.5
Kumlehn, J.6
Vogel, H.7
Rotter, B.8
-
40
-
-
77953227281
-
Apomictic and sexual ovules of Boechera display heterochronic global gene expression patterns
-
10.1105/tpc.109.072223, 2861462, 20305122
-
Sharbel TF, Voigt ML, Corral JM, Galla G, Kumlehn J, Klukas C, Schreiber F, Vogel H, Rotter B. Apomictic and sexual ovules of Boechera display heterochronic global gene expression patterns. Plant Cell 2010, 22:655-671. 10.1105/tpc.109.072223, 2861462, 20305122.
-
(2010)
Plant Cell
, vol.22
, pp. 655-671
-
-
Sharbel, T.F.1
Voigt, M.L.2
Corral, J.M.3
Galla, G.4
Kumlehn, J.5
Klukas, C.6
Schreiber, F.7
Vogel, H.8
Rotter, B.9
-
41
-
-
56649120500
-
Identification of soybean microRNAs and their targets
-
10.1007/s00425-008-0818-x, 18815805
-
Zhang B, Pan X, Stellwag EJ. Identification of soybean microRNAs and their targets. Planta 2008, 229:161-182. 10.1007/s00425-008-0818-x, 18815805.
-
(2008)
Planta
, vol.229
, pp. 161-182
-
-
Zhang, B.1
Pan, X.2
Stellwag, E.J.3
-
42
-
-
30744468557
-
Evidence that miRNAs are different from other RNAs
-
10.1007/s00018-005-5467-7, 16395542
-
Zhang BH, Pan XP, Cox SB, Cobb GP, Anderson TA. Evidence that miRNAs are different from other RNAs. Cell Mol Life Sci 2006, 63:246-254. 10.1007/s00018-005-5467-7, 16395542.
-
(2006)
Cell Mol Life Sci
, vol.63
, pp. 246-254
-
-
Zhang, B.H.1
Pan, X.P.2
Cox, S.B.3
Cobb, G.P.4
Anderson, T.A.5
-
43
-
-
33646830110
-
Conservation and divergence of plant microRNA genes
-
10.1111/j.1365-313X.2006.02697.x, 16623887
-
Zhang B, Pan X, Cannon CH, Cobb GP, Anderson TA. Conservation and divergence of plant microRNA genes. The Plant Journal 2006, 46:243-259. 10.1111/j.1365-313X.2006.02697.x, 16623887.
-
(2006)
The Plant Journal
, vol.46
, pp. 243-259
-
-
Zhang, B.1
Pan, X.2
Cannon, C.H.3
Cobb, G.P.4
Anderson, T.A.5
-
44
-
-
0033119454
-
MRNAs have greater negative folding free energies than shuffled or codon choice randomized sequences
-
10.1093/nar/27.7.1578, 148359, 10075987
-
Seffens W, Digby D. mRNAs have greater negative folding free energies than shuffled or codon choice randomized sequences. Nucleic Acids Res 1999, 27:1578-1584. 10.1093/nar/27.7.1578, 148359, 10075987.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 1578-1584
-
-
Seffens, W.1
Digby, D.2
-
45
-
-
10244243802
-
Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences
-
Bonnet E, Wuyts J, Rouze P. Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences. Bioinformation 2004, 20:2911-2917.
-
(2004)
Bioinformation
, vol.20
, pp. 2911-2917
-
-
Bonnet, E.1
Wuyts, J.2
Rouze, P.3
-
46
-
-
0025361553
-
Predicting optimal and suboptimal secondary structure for RNA, in "Molecular Evolution: Computer Analysis of Protein and Nucleic Acid Sequences"
-
Doolittle RF
-
Jaeger JA, Turner DH, Zuker M. Predicting optimal and suboptimal secondary structure for RNA, in "Molecular Evolution: Computer Analysis of Protein and Nucleic Acid Sequences". Methods in Enzymology 1990, 183:281-306. Doolittle RF.
-
(1990)
Methods in Enzymology
, vol.183
, pp. 281-306
-
-
Jaeger, J.A.1
Turner, D.H.2
Zuker, M.3
-
47
-
-
0025264854
-
The equilibrium partition function and base pair binding probabilities for RNA secondary structure
-
10.1002/bip.360290621, 1695107
-
McCaskill JS. The equilibrium partition function and base pair binding probabilities for RNA secondary structure. Biopolymers 1990, 29(6-7):1105-1119. 10.1002/bip.360290621, 1695107.
-
(1990)
Biopolymers
, vol.29
, Issue.6-7
, pp. 1105-1119
-
-
McCaskill, J.S.1
-
48
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
10.1093/nar/gkg595, 169194, 12824337
-
Zuker M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 2003, 31(13):3406-3415. 10.1093/nar/gkg595, 169194, 12824337.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.13
, pp. 3406-3415
-
-
Zuker, M.1
-
49
-
-
77958040394
-
A computational-based update on microRNAs and their targets in barley (Hordeum vulgare L.)
-
10.1186/1471-2164-11-595, 3091740, 20969764
-
Colaiacovo M, Subacchi A, Bagnaresi P, Lamontanara A, Cattivelli L, Faccioli P. A computational-based update on microRNAs and their targets in barley (Hordeum vulgare L.). BMC Genomics 2010, 11:595. 10.1186/1471-2164-11-595, 3091740, 20969764.
-
(2010)
BMC Genomics
, vol.11
, pp. 595
-
-
Colaiacovo, M.1
Subacchi, A.2
Bagnaresi, P.3
Lamontanara, A.4
Cattivelli, L.5
Faccioli, P.6
-
50
-
-
79951549936
-
Characterization of statistical features for plant microRNA prediction
-
10.1186/1471-2164-12-108, 3053258, 21324149
-
Thakur V, Wanchana S, Xu M, Bruskiewich R, Quick WP, Mosig A, Zhu X. Characterization of statistical features for plant microRNA prediction. BMC Genomics 2011, 12:108. 10.1186/1471-2164-12-108, 3053258, 21324149.
-
(2011)
BMC Genomics
, vol.12
, pp. 108
-
-
Thakur, V.1
Wanchana, S.2
Xu, M.3
Bruskiewich, R.4
Quick, W.P.5
Mosig, A.6
Zhu, X.7
-
51
-
-
3843089328
-
Detection of 91 potential conserved plant microRNAs in Arabidopsis thaliana and Oryza sativa identifies important target genes
-
10.1073/pnas.0404025101, 509231, 15272084
-
Bonnet E, Wuyts J, Rouze P, de Peer YV. Detection of 91 potential conserved plant microRNAs in Arabidopsis thaliana and Oryza sativa identifies important target genes. Proc Natl Acad Sci USA 2004, 101:11511-11516. 10.1073/pnas.0404025101, 509231, 15272084.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 11511-11516
-
-
Bonnet, E.1
Wuyts, J.2
Rouze, P.3
de Peer, Y.V.4
-
52
-
-
27844495281
-
Identification and characterization of new plant microRNAs using EST analysis
-
10.1038/sj.cr.7290302, 15916721
-
Zhang BH, Pan XP, Wang QL, Cobb GP, Anderson TA. Identification and characterization of new plant microRNAs using EST analysis. Cell Research 2005, 15:336-360. 10.1038/sj.cr.7290302, 15916721.
-
(2005)
Cell Research
, vol.15
, pp. 336-360
-
-
Zhang, B.H.1
Pan, X.P.2
Wang, Q.L.3
Cobb, G.P.4
Anderson, T.A.5
-
53
-
-
84960125795
-
Degradome sequencing reveals endogenous small RNA targets in rice (Oryza sativa L., ssp. Indica)
-
Zhou M, Gu L, Li P, Song X, Wei L, Chen Z, Cao X. Degradome sequencing reveals endogenous small RNA targets in rice (Oryza sativa L., ssp. Indica). Front Biol 2010, 5(1):67-90.
-
(2010)
Front Biol
, vol.5
, Issue.1
, pp. 67-90
-
-
Zhou, M.1
Gu, L.2
Li, P.3
Song, X.4
Wei, L.5
Chen, Z.6
Cao, X.7
-
54
-
-
33645525893
-
MicroRNAs and their regulatory roles in plants
-
10.1146/annurev.arplant.57.032905.105218, 16669754
-
Jones-Rhoades MW, Bartel DP, Bartel B. MicroRNAs and their regulatory roles in plants. Annu Rev Plant Biol 2006, 57:19-53. 10.1146/annurev.arplant.57.032905.105218, 16669754.
-
(2006)
Annu Rev Plant Biol
, vol.57
, pp. 19-53
-
-
Jones-Rhoades, M.W.1
Bartel, D.P.2
Bartel, B.3
-
55
-
-
33846574715
-
The role of microRNAs in sensing nutrient stress
-
10.1111/j.1365-3040.2007.01643.x, 17263777
-
Chiou TJ. The role of microRNAs in sensing nutrient stress. Plant Cell Environ 2007, 30:323-332. 10.1111/j.1365-3040.2007.01643.x, 17263777.
-
(2007)
Plant Cell Environ
, vol.30
, pp. 323-332
-
-
Chiou, T.J.1
-
56
-
-
33846904347
-
The miRNA156/157 recognition element in the 3' UTR of the Arabidopsis SBP box gene SPL3 prevents early Flowering by translational inhibition in seedlings
-
10.1111/j.1365-313X.2006.02983.x, 17217458
-
Gandikota M, Birkenbihl RP, Hohmann S, Cardon GH, Saedler H, Huijser P. The miRNA156/157 recognition element in the 3' UTR of the Arabidopsis SBP box gene SPL3 prevents early Flowering by translational inhibition in seedlings. Plant J 2007, 49:683-693. 10.1111/j.1365-313X.2006.02983.x, 17217458.
-
(2007)
Plant J
, vol.49
, pp. 683-693
-
-
Gandikota, M.1
Birkenbihl, R.P.2
Hohmann, S.3
Cardon, G.H.4
Saedler, H.5
Huijser, P.6
-
57
-
-
0242361521
-
Regulation of flowering time and floral organ identity by a microRNA and its APETALA2-like target genes
-
10.1105/tpc.016238, 280575, 14555699
-
Aukerman MJ, Sakai H. Regulation of flowering time and floral organ identity by a microRNA and its APETALA2-like target genes. Plant Cell 2003, 15:2730-2741. 10.1105/tpc.016238, 280575, 14555699.
-
(2003)
Plant Cell
, vol.15
, pp. 2730-2741
-
-
Aukerman, M.J.1
Sakai, H.2
-
58
-
-
13944263944
-
The early extra petals1 mutant uncovers a role for microRNA miR164c in regulating petal number in Arabidopsis
-
10.1016/j.cub.2005.02.017, 15723790
-
Baker CC, Sieber P, Wellmer F, Meyerowitz EM. The early extra petals1 mutant uncovers a role for microRNA miR164c in regulating petal number in Arabidopsis. Curr Biol 2005, 15:303-315. 10.1016/j.cub.2005.02.017, 15723790.
-
(2005)
Curr Biol
, vol.15
, pp. 303-315
-
-
Baker, C.C.1
Sieber, P.2
Wellmer, F.3
Meyerowitz, E.M.4
-
59
-
-
0037320231
-
P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA unction
-
10.1016/S1534-5807(03)00025-X, 12586064
-
Kasschau KD, Xie Z, Allen E, Llave C, Chapman EJ, Krizan KA, Carrington JC. P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA unction. Dev Cell 2003, 4:205-217. 10.1016/S1534-5807(03)00025-X, 12586064.
-
(2003)
Dev Cell
, vol.4
, pp. 205-217
-
-
Kasschau, K.D.1
Xie, Z.2
Allen, E.3
Llave, C.4
Chapman, E.J.5
Krizan, K.A.6
Carrington, J.C.7
-
60
-
-
0037712997
-
The ubiquitin/26S proteasome pathway, the complex last chapter in the life of many plant proteins
-
10.1016/S1360-1385(03)00014-1, 12663224
-
Vierstra RD. The ubiquitin/26S proteasome pathway, the complex last chapter in the life of many plant proteins. Trends Plant Sci 2003, 8:135-142. 10.1016/S1360-1385(03)00014-1, 12663224.
-
(2003)
Trends Plant Sci
, vol.8
, pp. 135-142
-
-
Vierstra, R.D.1
-
61
-
-
0141872963
-
The AtGRF family of putative transcription factors is involved in leaf and cotyledon growth in Arabidopsis
-
10.1046/j.1365-313X.2003.01862.x, 12974814
-
Kim JH, Choi D, Kende H. The AtGRF family of putative transcription factors is involved in leaf and cotyledon growth in Arabidopsis. Plant J 2003, 36:94-104. 10.1046/j.1365-313X.2003.01862.x, 12974814.
-
(2003)
Plant J
, vol.36
, pp. 94-104
-
-
Kim, J.H.1
Choi, D.2
Kende, H.3
-
62
-
-
0002710402
-
From sexuality to apomixis: molecular and genetic approaches
-
Mexico: CIMMYT, IRD European Commission DG VI (FAIR), Savidan Y, Carman JG, Dresselhaus T
-
Grossniklaus U. From sexuality to apomixis: molecular and genetic approaches. The Flowering of Apomixis: From Mechanisms to Genetic Engineering 2001, 168-211. Mexico: CIMMYT, IRD European Commission DG VI (FAIR), Savidan Y, Carman JG, Dresselhaus T.
-
(2001)
The Flowering of Apomixis: From Mechanisms to Genetic Engineering
, pp. 168-211
-
-
Grossniklaus, U.1
-
63
-
-
78049249922
-
Quantitative variation for apomixis components in the genus Boechera
-
10.3732/ajb.1000188, 21616805
-
Aliyu OM, Schranz ME, Sharbel TF. Quantitative variation for apomixis components in the genus Boechera. Am J Bot 2010, 97(10):1719-1731. 10.3732/ajb.1000188, 21616805.
-
(2010)
Am J Bot
, vol.97
, Issue.10
, pp. 1719-1731
-
-
Aliyu, O.M.1
Schranz, M.E.2
Sharbel, T.F.3
-
64
-
-
0025465516
-
Early flower development in Arabidopsis
-
159928, 2152125
-
Smyth DR, Bowman JL, Meyerowitz EM. Early flower development in Arabidopsis. Plant Cell 1990, 2:755-767. 159928, 2152125.
-
(1990)
Plant Cell
, vol.2
, pp. 755-767
-
-
Smyth, D.R.1
Bowman, J.L.2
Meyerowitz, E.M.3
-
65
-
-
75549083571
-
PMRD: plant microRNA database
-
10.1093/nar/gkp818, 2808885, 19808935
-
Zhang Z, Yu J, Li D, Zhang Z, Liu F, Zhou X, Wang T, Ling Y, Su Z. PMRD: plant microRNA database. Nucleic Acids Research 2010, 38:D806-D813. 10.1093/nar/gkp818, 2808885, 19808935.
-
(2010)
Nucleic Acids Research
, vol.38
-
-
Zhang, Z.1
Yu, J.2
Li, D.3
Zhang, Z.4
Liu, F.5
Zhou, X.6
Wang, T.7
Ling, Y.8
Su, Z.9
-
66
-
-
1842683164
-
In situ synthesis of oligonucleotide microarrays
-
10.1002/bip.20005, 15048782
-
Gao X, Gulari E, Zhou X. In situ synthesis of oligonucleotide microarrays. Biopolymers 2004, 73:579-596. 10.1002/bip.20005, 15048782.
-
(2004)
Biopolymers
, vol.73
, pp. 579-596
-
-
Gao, X.1
Gulari, E.2
Zhou, X.3
-
67
-
-
0037316303
-
A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
-
10.1093/bioinformatics/19.2.185, 12538238
-
Bolstad BM, Irizarry RA, Astrand M, Speed TP. A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 2003, 19:185-193. 10.1093/bioinformatics/19.2.185, 12538238.
-
(2003)
Bioinformatics
, vol.19
, pp. 185-193
-
-
Bolstad, B.M.1
Irizarry, R.A.2
Astrand, M.3
Speed, T.P.4
-
68
-
-
23144458275
-
MiRU: an automated plant miRNA target prediction server
-
Zhang Y. miRU: an automated plant miRNA target prediction server. Nucleic Acids Res 2005, (33 Web Server):W701-W704.
-
(2005)
Nucleic Acids Res
, Issue.33 WEB SERVER
-
-
Zhang, Y.1
-
69
-
-
80051787905
-
Selection of reference genes for quantitative real-time PCR expression studies of micro-dissected reproductive tissues in apomictic and sexual Boechera
-
10.1186/1756-0500-4-303, 3171723, 21851639
-
Pellino M, Sharbel TF, Mau M, Amiteye S, Corral JM. Selection of reference genes for quantitative real-time PCR expression studies of micro-dissected reproductive tissues in apomictic and sexual Boechera. BMC Research Notes 2011, 4:303. 10.1186/1756-0500-4-303, 3171723, 21851639.
-
(2011)
BMC Research Notes
, vol.4
, pp. 303
-
-
Pellino, M.1
Sharbel, T.F.2
Mau, M.3
Amiteye, S.4
Corral, J.M.5
|