New ultra rapid test for detection of bacteria;Nouveau test ultrarapide pour la détection de bactéries

Pathologie Biologie

Volumn 59, Issue 5, 2011, Pages 248-255

  Goldschmidt, P ^a   Balloy, T ^a   Degorge, S ^a   Benallaoua, D ^a   Batellier, L ^a   Koskas, F ^b   Borsali, E ^a   Chaumeil, C ^a  

^a CENTRE HOSPITALIER NATIONAL D OPHTALMOLOGIE DES QUINZE VINGTS   (France)

^b PITIÉ SALPÊTRIÈRE HOSPITAL   (France)

Author keywords

Bacteria; Diagnosis; Infection; Medical devices; Microbiological control; Rapid test; Real time PCR; Sterility testing

Indexed keywords

DNA;

ACINETOBACTER; ARTICLE; BACILLUS; BACTERIAL GENE; BACTERIUM CULTURE; BACTERIUM DETECTION; BACTERIUM IDENTIFICATION; COLONY FORMING UNIT; CONTROLLED STUDY; CORYNEBACTERIUM; DNA EXTRACTION; ENTEROBACTERIACEAE; FUNGUS; HAEMOPHILUS; HIGH RESOLUTION MELTING ANALYSIS; MOLECULAR PROBE; NEISSERIA MENINGITIDIS; NONHUMAN; PROPIONIBACTERIACEAE; PSEUDOMONAS; REAL TIME POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS; STAPHYLOCOCCUS; STENOTROPHOMONAS MALTOPHILIA; STREPTOCOCCUS; TEMPERATURE MEASUREMENT;

BACTERIA; DNA, BACTERIAL; HUMANS; REAL-TIME POLYMERASE CHAIN REACTION; TIME FACTORS;

EID: 80053613392     PISSN: 03698114     EISSN: 17683114     Source Type: Journal    
DOI: 10.1016/j.patbio.2009.10.008     Document Type: Article

References (26)

1. United States Pharmacopeia, 30th Revision. The United States Pharmacopeial Convention: 2008 FDA Guidelines " Guidance for industry sterile drug products by aseptic processing. Current Good Manufacturing Practices" .
2. ISO ANSI/AAMI/ISO 11737-1-2006 and ISO 11737 ANSI/AAMI/ISO 11737-2-1998. American National Standard. Sterilization of health care products. Determination of the population of microorganisms on product-Tests of sterility in the validation of a sterilization process.
3. U.S. Department of Health and Human Services, Agency For Healthcare Research and Quality Closing the Quality Gap: A critical analysis of quality improvement strategies: volume 6, prevention of healthcare - associated infections. Rockville, MD 20850 http://www.ahrq.gov/.
4. Holt J.G., Krieg N.R., Sneath P.H.A., Staley J.T., Williams S.T. Bergey's manual of determinative bacteriology 1994, Williams & Wilkins Ed, Baltimore, USA. 9th Ed.
5. Lee, John Y. " Investigation Sterility test failures" Pharmaceubacttical technology. Code of Federal regulations. 2006; Title 21/Chapter I/Part 58, " Good laboratory practice nonclinical laboratory studies" .
6. Marchesi J.R., Sato T., Weightman A.J., Martin T.A., Fry J.C., Hiom S.J., et al. Design and evaluation of useful bacterium-specific PCR primers that amplify genes coding 16S rRNA. Appl Environ Microbiol 1998, 64:795-799.
7. Mohammadi T., Pietersz R.N., Vandenbroucke-Grauls C.M., Savelkoul P.H., Reesink H.W. Detection of bacteria in platelet concentrates: comparison of broad-range real-time 16S rDNA polymerase chain reaction and automated culturing. Transfusion 2005, 45(5):731-736.
8. Greisen K., Loeffelholz M., Purohit A., Leong D. PCR primers and probes for the 16S rRNA gene of most species of pathogenic bacteria, including bacteria found in cerebrospinal fluid. J. Clin Microbiol 1994, 32(2):335-351.
9. Rosey A.L., Abachin E., Quesnes G., Cadilhac C., Pejin Z., Glorion C., et al. Development of a broad-range 16S rDNA real-time PCR for the diagnosis of septic arthritis in children. J Microbiol Methods 2007, 68(1):88-93.
10. Nadkarni M.A., Martin F.E., Jacques N.A., Hunter N. Determination of bacterial load by real-time PCR using a broad-range (universal) probe and primers set. Microbiology 2002, 148:257-266.
11. Al-Robaiy S., Rupf S., Eschrich K. Rapid competitive PCR using melting curve analysis for DNA quantification. Biotechniques 2001, 31(6):1382-1386. 1388.
12. Selvapandiyan A., Stabler K., Ansari N.A., Kerby S., Riemenschneider J., Salotra P., et al. A novel semiquantitative fluorescence-based multiplex polymerase chain reaction assay for rapid simultaneous detection of bacterial and parasitic pathogens from blood. J Mol Diagn 2005, 7(2):268-275.
13. Harder T.C., Harder M., Vos H., Kulonen K., Kennedy-Stoskopf S., Liess B., et al. Characterization of phocid herpesvirus-1 and -2 as putative alpha- and gammaherpesviruses of North American and Eubactropean pinnipeds. J Gen Virol 1996, 77:27-35.
14. van Doornum G.J., Guldemeester J., Osterhaus A.D., Niesters H.G. Diagnosing herpes virus infections by real-time amplification and rapid culture. J Clin Microbiol 2003, 41(2):576-580.
15. Goldschmidt P., Degorge S., Benallaoua D., Basli E., Batellier L., Boutboul S., et al. New test for the diagnosis of bacterial endophthalmitis. Br J Ophthalmol 2009, 93(8):1089-1095.
16. Wellinghausen N., Wirths B., Franz A.R., Karolyi L., Marre R., Reischl U. Algorithm the identification of bacterial pathogens in positive blood cultures by real-time LightCycler polymerase chain reaction (PCR) with sequence-specific probes. Diagn Microbiol Infect Dis 2004, 48(4):229-241.
17. Goldschmidt P., Ferreira C.C., Degorge S., Benallaoua D., Boutboul S., Laroche L., et al. Rapid detection and quantification of Propionibacteriaceae. Br J Ophthalmol 2009, 93(2):258-262.
18. Klausegger A., Hell M., Berger A., Zinober K., Baier S., Jones N., et al. Gram type specific broad-range PCR amplification for rapid detection of 62 pathogenic bacteria. J Clin Microbiol 1999, 37:464-466.
19. Drancourt M., Bollet C., Carlioz A., Martelin R., Gayral J.P., Raoult D. 16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates. J Clin Microbiol 2000, 38:3623-3630.
20. Welinder-Olsson C., Dotevall L., Hogevik H., Jungnelius R., Trolls B., Wahl M., et al. Comparison of broad-range bacterial PCR and culture of cerebrospinal fluid for diagnosis of community-acquired bacterial meningitis. Clin Microbiol Infect 2007, 13(9):879-886.
21. Chen Ju-Chien, Chien-Ling Huang, Chung-Ching Lin, Chi-Ching Chen, Yi-Chih Chang, Shy-Shin Chang, et al. Rapid detection and identification of clinically important bacteria by high-resolution melting analysis after broad-range ribosomal RNA real-time PCR. Clin Chem 2006, 52(11):1997-2004.
22. Heid C.A., Stevens J., Livak K.J., Williams P.M. Real-time quantitative PCR. Genome Res 1996, 6:986-994.
23. Tseng C.-P., Cheng J.-C., Tseng C.-C., Wang C., Chen Y.-L., Chiu D.-T. Broad-range ribosomal RNA real-time PCR after removal of DNA from reagents: melting profiles clinically important bacteria. Clin Chem 2003, 49:306-309.
24. Dreier J., Störmer M., Kleesiek K. Real-time polymerase chain reaction in transfusion medicine: applications for detection of bacterial contamination in blood products. Transfus Med Rev 2007, 21(3):237-254.
25. Meier A., Persing D.H., Finken M., Bottger E.C. Elimination of contaminating DNA within polymerase chain reaction reagents: implications for a general approach to detection of uncultured pathogens. J Clin Microbiol 1993, 31:646-652.
26. Carroll N., Adamson P., Okhravi N. Elimination of contaminating bacterial DNA in Taq polymerase. J Clin Microbiol 1999, 37:3402-3404.