A global clustering algorithm to identify long intergenic non-coding RNA - with applications in mouse macrophages

PLoS ONE

Volumn 6, Issue 9, 2011, Pages

  Garmire, Lana X ^a   Garmire, David G ^b   Huang, Wendy ^c   Yao, Joyee ^c   Glass, Christopher K ^c   Subramaniam, Shankar ^a,c  

^a UNIVERSITY OF CALIFORNIA SAN DIEGO   (United States)

^b University of Hawaii at Manoa   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE LYSINE METHYLTRANSFERASE; LIPOPOLYSACCHARIDE; RNA POLYMERASE II; TRANSCRIPTION FACTOR AP 1; TRANSCRIPTION FACTOR PU 1; UNTRANSLATED RNA; HISTONE;

ANIMAL CELL; ARTICLE; CELLULAR DISTRIBUTION; CHROMATIN IMMUNOPRECIPITATION; CONTROLLED STUDY; ENHANCER REGION; EXON; GENE CLUSTER; GENE IDENTIFICATION; GENE LOCATION; GENETIC ALGORITHM; GENETIC CONSERVATION; MACROPHAGE; MATHEMATICAL MODEL; MOUSE; NONHUMAN; PREDICTIVE VALUE; PROMOTER REGION; PROTEIN MOTIF; RNA ANALYSIS; SIGNAL TRANSDUCTION; VALIDITY; ALGORITHM; ANIMAL; BIOLOGY; CHEMISTRY; CLUSTER ANALYSIS; DNA MICROARRAY; DNA SEQUENCE; GENETICS; GENOME; HUMAN; METABOLISM; METHODOLOGY;

ALGORITHMS; ANIMALS; CHROMATIN IMMUNOPRECIPITATION; CLUSTER ANALYSIS; COMPUTATIONAL BIOLOGY; GENOME; HISTONES; HUMANS; LIPOPOLYSACCHARIDES; MACROPHAGES; MICE; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; RNA POLYMERASE II; RNA, UNTRANSLATED; SEQUENCE ANALYSIS, DNA;

EID: 80053590671     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0024051     Document Type: Article

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