Genome sequence of Lactobacillus versmoldensis KCTC 3814

Journal of Bacteriology

Volumn 193, Issue 19, 2011, Pages 5589-5590

  Kim, Dae Soo ^a   Choi, Sang Haeng ^a   Kim, Dong Wook ^a   Kim, Ryong Nam ^a   Nam, Seong Hyeuk ^a   Kang, Aram ^a,b   Kim, Aeri ^a,b   Park, Hong Seog ^a,b  

^a Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

^b University of Science and Technology (UST)   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

3(OR 17)BETA HYDROXYSTEROID DEHYDROGENASE; ABC TRANSPORTER; ADENOSINE TRIPHOSPHATE; BINDING PROTEIN; GENOMIC DNA; MEMBRANE PROTEIN; RIBOSOME PROTEIN; RIBOSOME RNA; TRANSFER RNA; UNTRANSLATED RNA;

BACTERIAL GENOME; BACTERIUM CULTURE; BACTERIUM ISOLATION; LACTIC ACID BACTERIUM; LACTOBACILLUS; LACTOBACILLUS VERSMOLDENSIS; NONHUMAN; NOTE; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; POULTRY; PRIORITY JOURNAL; SPECIES IDENTIFICATION;

GENOME, BACTERIAL; LACTOBACILLUS; MOLECULAR SEQUENCE DATA;

LACTOBACILLUS VERSMOLDENSIS;

EID: 80053579391     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.05708-11     Document Type: Note

References (12)

1. Altschul, S., et al. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
2. Aziz, R. K., et al. 2008. The RAST server: rapid annotations using subsystems technology. BMC Genomics 9:75.
3. Birnboim, H. C., and J. Doly. 1979. A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res. 7:1513-1523.
4. Delcher, A. L., K. A. Bratke, E. C. Powers, and S. L. Salzberg. 2007. Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics 23:673-679.
5. Hammes, W. P., N. Weiss, and W. Holzapfel. 1992. The genera Lactobacillus and Carnobacterium, p. 1535-1594. In A. Balows, H. G. Trüper, M. Dworkin, W. Harder, and K. H. Schleifer (ed.), The prokaryotes, 2nd ed. Springer Verlag, New York, NY.
6. Hugas, M., M. Garriga, T. Aymerich, and J. M. Monfort. 1993. Biochemical characterization of lactobacilli from dry fermented sausages. Int. J. Food Microbiol. 18:107-113.
7. Jessen, B. 1995. Starter cultures for meat fermentation, p. 130-159. In G. Campbell-Platt and P. E. Cook (ed.), Fermented meats, Blackie, London, United Kingdom.
8. Kröckel, L., U. Schillinger, C. M. Franz, A. Bantleon, and W. Ludwig. 2003. Lactobacillus versmoldensis sp. nov., isolated from raw fermented sausage. Int. J. Syst. Evol. Microbiol. 53:513-517.
9. Lagesen, K., et al. 2007. RNAmmer: consistent and rapid annotation of rRNA genes. Nucleic Acids Res. 35:3100-3108.
10. Liolios, K. I. M. Chen., et al. 2010. The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata. Nucleic Acids Res. 38:D346-D354.
11. Lücke, F.-K. 1998. Fermented sausages, p. 441-583. In B. J. B. Wood (ed.), Microbiology of fermented foods, vol. 2. Blackie, London, United Kingdom.
12. Tatusov, R. L., E. V. Koonin, and D. J. Lipman. 1997. A genomic perspective on protein families. Science 278:631-637.