메뉴 건너뛰기




Volumn 75, Issue 6, 2011, Pages 665-677

HLA Class-I Diversity in Cameroon: Evidence for a North-South Structure of Genetic Variation and Relationships with African Populations

Author keywords

Bamileke; Cameroon; Ewondo; HLA; Podokwo; Uldeme

Indexed keywords

DNA; HLA A ANTIGEN; HLA ANTIGEN CLASS 1; HLA B ANTIGEN; HLA C ANTIGEN;

EID: 80053576722     PISSN: 00034800     EISSN: 14691809     Source Type: Journal    
DOI: 10.1111/j.1469-1809.2011.00672.x     Document Type: Article
Times cited : (9)

References (46)
  • 2
    • 0036702468 scopus 로고    scopus 로고
    • Population genetic relationships between Mediterranean populations determined by HLA allele distribution and a historic perspective
    • Arnaiz-Villena, A., Gómez-Casado, E. & Martínez-Laso, J. (2002). Population genetic relationships between Mediterranean populations determined by HLA allele distribution and a historic perspective. Tissue Antigens 60, 111-121.
    • (2002) Tissue Antigens , vol.60 , pp. 111-121
    • Arnaiz-Villena, A.1    Gómez-Casado, E.2    Martínez-Laso, J.3
  • 3
    • 0023227316 scopus 로고
    • The HLA system: Structure and function
    • Bodmer, W. F. (1987) The HLA system: Structure and function. J Clin Pathol 40, 948-958.
    • (1987) J Clin Pathol , vol.40 , pp. 948-958
    • Bodmer, W.F.1
  • 4
    • 0031925364 scopus 로고    scopus 로고
    • Identification of HLA-DR and -DQ alleles conferring susceptibility to pollen allergy and pollen associated food allergy
    • Boehncke, W. H., Loeliger, C., Kuehnl, P., Kalbacher, H., Bohm, B. O. & Gall, H. (1998) Identification of HLA-DR and -DQ alleles conferring susceptibility to pollen allergy and pollen associated food allergy. Clin Exp Allergy 28, 434-441.
    • (1998) Clin Exp Allergy , vol.28 , pp. 434-441
    • Boehncke, W.H.1    Loeliger, C.2    Kuehnl, P.3    Kalbacher, H.4    Bohm, B.O.5    Gall, H.6
  • 7
    • 10344265522 scopus 로고    scopus 로고
    • mtDNA sequences of Chadic-speaking populations from northern Cameroon suggest their affinities with eastern Africa
    • Cerny, V., Hajek, M., Cmejla, R., Bruzek, J. & Brdicka, R. (2004) mtDNA sequences of Chadic-speaking populations from northern Cameroon suggest their affinities with eastern Africa. Ann Hum Biol 31, 554-569.
    • (2004) Ann Hum Biol , vol.31 , pp. 554-569
    • Cerny, V.1    Hajek, M.2    Cmejla, R.3    Bruzek, J.4    Brdicka, R.5
  • 9
    • 65649088261 scopus 로고    scopus 로고
    • On the edge of Bantu expansions: mtDNA, Y chromosome and lactase persistence genetic variation in southwestern Angola.
    • Coelho, M., Sequeira, F., Luiselli, D., Beleza, S. & Rocha, J. (2009) On the edge of Bantu expansions: mtDNA, Y chromosome and lactase persistence genetic variation in southwestern Angola. BMC Evol Biol 9, 80-97.
    • (2009) BMC Evol Biol , vol.9 , pp. 80-97
    • Coelho, M.1    Sequeira, F.2    Luiselli, D.3    Beleza, S.4    Rocha, J.5
  • 14
    • 0002837198 scopus 로고
    • Historical/linguistic evidence for early African food production
    • In: (eds. J. D. Clark & S. A. Brandt) - Berkeley, CA University of California Press.
    • Ehret, C. (1984) Historical/linguistic evidence for early African food production. In: From hunters to farmers (eds. J. D. Clark & S. A. Brandt ), pp. 26-35. Berkeley, CA University of California Press.
    • (1984) From hunters to farmers , pp. 26-35
    • Ehret, C.1
  • 15
    • 0033794342 scopus 로고    scopus 로고
    • Diversity is demonstrated in class I HLA-A and HLA-B alleles in Cameroon, Africa: Description of HLA-A*03012, *2612, *3006 and HLA-B*1403, *4016, *4703
    • Ellis, J. M., Mack, S. J., Leke, R. F. G., Quakyi, I., Johnson, A. H. & Hurley, C. K. (2000) Diversity is demonstrated in class I HLA-A and HLA-B alleles in Cameroon, Africa: Description of HLA-A*03012, *2612, *3006 and HLA-B*1403, *4016, *4703. Tissue Antigens 56, 291-302.
    • (2000) Tissue Antigens , vol.56 , pp. 291-302
    • Ellis, J.M.1    Mack, S.J.2    Leke, R.F.G.3    Quakyi, I.4    Johnson, A.H.5    Hurley, C.K.6
  • 16
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data
    • Excoffier, L., Smouse, P. E. & Quattro, J. M. (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data. Genetics 131, 479-491.
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 17
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin version 3. 0: An integrated software package for population genetics data analysis
    • Excoffier, L., Laval, G. & Schneider, S. (2005) Arlequin version 3. 0: An integrated software package for population genetics data analysis. Evol Bioinform Online 1, 47-50.
    • (2005) Evol Bioinform Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 18
    • 0141642052 scopus 로고    scopus 로고
    • Functional categorization of HLA-DRB1 alleles in rheumatoid arthritis: The protective effect
    • Gilbert, M., Balandraud, N., Touinssi, M., Mercier, P., Roudier, J. & Reviron, D. (2003) Functional categorization of HLA-DRB1 alleles in rheumatoid arthritis: The protective effect. Hum Immunol 64, 930-935.
    • (2003) Hum Immunol , vol.64 , pp. 930-935
    • Gilbert, M.1    Balandraud, N.2    Touinssi, M.3    Mercier, P.4    Roudier, J.5    Reviron, D.6
  • 20
    • 78651292217 scopus 로고    scopus 로고
    • Allele frequency net: A database and online repository for immune gene frequencies in worldwide populations
    • Gonzalez-Galarza, F. F., Christmas, S., Middleton, D. & Jones, A. R. (2011) Allele frequency net: A database and online repository for immune gene frequencies in worldwide populations. Nucleic Acid Res 39, D913-D919.
    • (2011) Nucleic Acid Res , vol.39
    • Gonzalez-Galarza, F.F.1    Christmas, S.2    Middleton, D.3    Jones, A.R.4
  • 22
    • 44349095887 scopus 로고    scopus 로고
    • Adegenet: A R package for the multivariate analysis of genetic markers
    • Jombart, T. (2008) Adegenet: A R package for the multivariate analysis of genetic markers. Bioinformatics 24, 1403-1405.
    • (2008) Bioinformatics , vol.24 , pp. 1403-1405
    • Jombart, T.1
  • 23
    • 0034618869 scopus 로고    scopus 로고
    • The HLA system. First of two parts
    • Klein, J. & Sato, A. (2000) The HLA system. First of two parts. New Engl J Med 343, 702-709.
    • (2000) New Engl J Med , vol.343 , pp. 702-709
    • Klein, J.1    Sato, A.2
  • 24
    • 0042629672 scopus 로고    scopus 로고
    • PyPop: A software framework for population genomics: Analyzing large-scale multi-locus genotype data
    • Lancaster, A., Nelson, M. P., Meyer, D., Single R. M. & Thomson, G. (2003) PyPop: A software framework for population genomics: Analyzing large-scale multi-locus genotype data. Pac Symp Biocomput 8, 514.
    • (2003) Pac Symp Biocomput , vol.8 , pp. 514
    • Lancaster, A.1    Nelson, M.P.2    Meyer, D.3    Single, R.M.4    Thomson, G.5
  • 26
    • 0021057348 scopus 로고
    • Current direction in West African prehistory
    • McIntosh S. K. & McIntosh, R. J. (1983) Current direction in West African prehistory. Ann Rev Anthropol 12, 215-258.
    • (1983) Ann Rev Anthropol , vol.12 , pp. 215-258
    • McIntosh, S.K.1    McIntosh, R.J.2
  • 27
    • 0024284028 scopus 로고
    • A simple salting out procedure for extracting DNA from human nucleated cells
    • Miller, S. A., Dykes, D. D. & Polesky, H. F. (1988) A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res 16, 1215.
    • (1988) Nucleic Acids Res , vol.16 , pp. 1215
    • Miller, S.A.1    Dykes, D.D.2    Polesky, H.F.3
  • 28
    • 55949089947 scopus 로고    scopus 로고
    • The human HLA system
    • Naik, S. (2003) The human HLA system. J Indian Rheumatol Assoc 11, 79-83.
    • (2003) J Indian Rheumatol Assoc , vol.11 , pp. 79-83
    • Naik, S.1
  • 29
    • 0026640446 scopus 로고
    • HLA polymorphism and evolution
    • Riley, E. & Olerup, O. (1992) HLA polymorphism and evolution. Immunol Today 13, 333-335.
    • (1992) Immunol Today , vol.13 , pp. 333-335
    • Riley, E.1    Olerup, O.2
  • 30
    • 80053568765 scopus 로고    scopus 로고
    • African human mtDNA phylogeography at-a-glance
    • Rosa, A. & Brehm, A. (2011) African human mtDNA phylogeography at-a-glance. J Anthropol Sci 89, 27-60.
    • (2011) J Anthropol Sci , vol.89 , pp. 27-60
    • Rosa, A.1    Brehm, A.2
  • 31
    • 4444308927 scopus 로고    scopus 로고
    • MtDNA profile of West Africa Guineans: Towards a better understanding of the Senegambia region
    • Rosa, A., Brehm, A., Kivisild, T., Metspalu, E. & Villems, R. (2004) MtDNA profile of West Africa Guineans: Towards a better understanding of the Senegambia region. Ann Hum Genet 68, 340-352.
    • (2004) Ann Hum Genet , vol.68 , pp. 340-352
    • Rosa, A.1    Brehm, A.2    Kivisild, T.3    Metspalu, E.4    Villems, R.5
  • 32
    • 32644451014 scopus 로고    scopus 로고
    • Population data on 11 Y-chromosome STRs from Guiné-Bissau
    • Rosa, A., Ornelas, C., Brehm, A. & Villems, R. (2006) Population data on 11 Y-chromosome STRs from Guiné-Bissau. Forensic Sci Int 157, 210-217.
    • (2006) Forensic Sci Int , vol.157 , pp. 210-217
    • Rosa, A.1    Ornelas, C.2    Brehm, A.3    Villems, R.4
  • 34
    • 0034851716 scopus 로고    scopus 로고
    • African diversity from the HLA point of view: Influence of genetic drift, geography, linguistics, and natural selection
    • Sanchez-Mazas, A. (2001) African diversity from the HLA point of view: Influence of genetic drift, geography, linguistics, and natural selection. Hum Immunol 62, 937-948.
    • (2001) Hum Immunol , vol.62 , pp. 937-948
    • Sanchez-Mazas, A.1
  • 36
    • 51749101703 scopus 로고    scopus 로고
    • Balancing selection and heterogeneity across the classical human leukocyte antigen loci: A meta-analytic review of 497 population studies
    • Solberg, O. D., Mack, S. J., Lancaster, A. K., Single, R. M., Tsai, Y., Sanchez-Mazas, A. & Thomson, G. (2008) Balancing selection and heterogeneity across the classical human leukocyte antigen loci: A meta-analytic review of 497 population studies. Hum Immunol 69, 443-464.
    • (2008) Hum Immunol , vol.69 , pp. 443-464
    • Solberg, O.D.1    Mack, S.J.2    Lancaster, A.K.3    Single, R.M.4    Tsai, Y.5    Sanchez-Mazas, A.6    Thomson, G.7
  • 37
    • 0141815264 scopus 로고
    • Etude anthropobiologique au Cameroun. Les Bamiléké du plateau occidental
    • Spedini, G. & Bailly, C. (1987) Etude anthropobiologique au Cameroun. Les Bamiléké du plateau occidental. Riv Anthropol 65, 193-212.
    • (1987) Riv Anthropol , vol.65 , pp. 193-212
    • Spedini, G.1    Bailly, C.2
  • 39
    • 0036630041 scopus 로고    scopus 로고
    • Distribution of HLA alleles in Portugal and Cabo Verde. Relationships with the slave trade route
    • Spínola, H., Brehm, A., Williams, F., Jesus, J. & Middleton, D. (2002) Distribution of HLA alleles in Portugal and Cabo Verde. Relationships with the slave trade route. Ann Hum Genet 66, 285-296.
    • (2002) Ann Hum Genet , vol.66 , pp. 285-296
    • Spínola, H.1    Brehm, A.2    Williams, F.3    Jesus, J.4    Middleton, D.5
  • 40
    • 24144435323 scopus 로고    scopus 로고
    • HLA class I and II polymorphisms in Azores show different settlements in Oriental and Central Islands
    • Spínola, H., Brehm, A., Bettencourt, B., Middleton, D. & Bruges-Armas, J. (2005) HLA class I and II polymorphisms in Azores show different settlements in Oriental and Central Islands. Tissue Antigens 66, 217-230.
    • (2005) Tissue Antigens , vol.66 , pp. 217-230
    • Spínola, H.1    Brehm, A.2    Bettencourt, B.3    Middleton, D.4    Bruges-Armas, J.5
  • 41
    • 29344463048 scopus 로고    scopus 로고
    • HLA polymorphisms in Cabo Verde and Guiné-Bissau inferred from sequence-based typing
    • Spínola, H., Bruges-Armas, J., Middleton, D. & Brehm, A. (2005) HLA polymorphisms in Cabo Verde and Guiné-Bissau inferred from sequence-based typing. Hum Immunol 66, 1082-1092.
    • (2005) Hum Immunol , vol.66 , pp. 1082-1092
    • Spínola, H.1    Bruges-Armas, J.2    Middleton, D.3    Brehm, A.4
  • 42
    • 0242691208 scopus 로고    scopus 로고
    • A comparison of Bayesian methods for haplotype reconstruction from population genotype data
    • Stephens, M. & Donnelly, P. (2003) A comparison of Bayesian methods for haplotype reconstruction from population genotype data. Am J Hum Genet 73, 1162-1169.
    • (2003) Am J Hum Genet , vol.73 , pp. 1162-1169
    • Stephens, M.1    Donnelly, P.2
  • 44
    • 84928094388 scopus 로고
    • Histoire du peuplement et genése des paysages dans l'ouest Camerounais
    • Warnier, J. P. (1984) Histoire du peuplement et genése des paysages dans l'ouest Camerounais. J. African History 25, 395-410.
    • (1984) J. African History , vol.25 , pp. 395-410
    • Warnier, J.P.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.