-
1
-
-
79952446259
-
When one is better than two: RNA with dual functions
-
D. Ulveling, C. Francastel, and F. Hubé When one is better than two: RNA with dual functions Biochimie 93 2011 633 644
-
(2011)
Biochimie
, vol.93
, pp. 633-644
-
-
Ulveling, D.1
Francastel, C.2
Hubé, F.3
-
2
-
-
55949112523
-
A human snoRNA with microRNA-like functions
-
C. Ender, A. Krek, M.R. Friedlander, M. Beitzinger, L. Weinmann, W. Chen, S. Pfeffer, N. Rajewsky, and G. Meister A human snoRNA with microRNA-like functions Mol. Cell 32 2008 519 528
-
(2008)
Mol. Cell
, vol.32
, pp. 519-528
-
-
Ender, C.1
Krek, A.2
Friedlander, M.R.3
Beitzinger, M.4
Weinmann, L.5
Chen, W.6
Pfeffer, S.7
Rajewsky, N.8
Meister, G.9
-
3
-
-
0032736909
-
Alteration of enod40 expression modifies Medicago truncatula root nodule development induced by Sinorhizobium meliloti
-
C. Charon, C. Sousa, M. Crespi, and A. Kondorosi Alteration of enod40 expression modifies Medicago truncatula root nodule development induced by Sinorhizobium meliloti Plant Cell 11 1999 1953 1966
-
(1999)
Plant Cell
, vol.11
, pp. 1953-1966
-
-
Charon, C.1
Sousa, C.2
Crespi, M.3
Kondorosi, A.4
-
4
-
-
34250679403
-
Identification of conserved secondary structures and expansion segments in enod40 RNAs reveals new enod40 homologues in plants
-
DOI 10.1093/nar/gkm173
-
A.P. Gultyaev, and A. Roussis Identification of conserved secondary structures and expansion segments in ENOD40 RNAs reveals new ENOD40 homologues in plants Nucleic Acids Res. 35 2007 3144 3152 (Pubitemid 47073651)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.9
, pp. 3144-3152
-
-
Gultyaev, A.P.1
Roussis, A.2
-
5
-
-
44649141367
-
Coordinating nodule morphogenesis with rhizobial infection in legumes
-
DOI 10.1146/annurev.arplant.59.032607.092839
-
G.E. Oldroyd, and J.A. Downie Coordinating nodule morphogenesis with rhizobial infection in legumes Annu. Rev. Plant Biol. 59 2008 519 546 (Pubitemid 351813041)
-
(2008)
Annual Review of Plant Biology
, vol.59
, pp. 519-546
-
-
Oldroyd, G.E.D.1
Downie, J.A.2
-
6
-
-
58749089536
-
De novo organ formation from differentiated cells: Root nodule organogenesis
-
M. Crespi, and F. Frugier De novo organ formation from differentiated cells: root nodule organogenesis Sci. Signal. 1 2008 re11
-
(2008)
Sci. Signal.
, vol.1
, pp. 11
-
-
Crespi, M.1
Frugier, F.2
-
7
-
-
0027519716
-
Lipo-oligosaccharide nodulation factors: A minireview new class of signaling molecules mediating recognition and morphogenesis
-
DOI 10.1016/0092-8674(93)90717-5
-
J. Denarié, and J. Cullimore Lipo-oligosaccharide nodulation factors: a new class of signaling molecules mediating recognition and morphogenesis Cell 74 1993 951 954 (Pubitemid 23289452)
-
(1993)
Cell
, vol.74
, Issue.6
, pp. 951-954
-
-
Denarie, J.1
Cullimore, J.2
-
8
-
-
0032438597
-
Regulation of symbiotic root nodule development
-
DOI 10.1146/annurev.genet.32.1.33
-
M. Schultze, and A. Kondorosi Regulation of symbiotic root nodule development Annu. Rev. Genet. 32 1998 33 57 (Pubitemid 29045307)
-
(1998)
Annual Review of Genetics
, vol.32
, pp. 33-57
-
-
Schultze, M.1
Kondorosi, A.2
-
9
-
-
0027584631
-
Characterization of GmENOD40, a gene showing novel patterns of cell-specific expression during soybean nodule development
-
W.C. Yang, P. Katinakis, P. Hendriks, A. Smolders, F. de Vries, J. Spee, A. Van Kammen, T. Bisseling, and H. Franssen Characterization of GmENOD40, a gene showing novel patterns of cell-specific expression during soybean nodule development Plant J. 3 1993 573 585
-
(1993)
Plant J.
, vol.3
, pp. 573-585
-
-
Yang, W.C.1
Katinakis, P.2
Hendriks, P.3
Smolders, A.4
De Vries, F.5
Spee, J.6
Van Kammen, A.7
Bisseling, T.8
Franssen, H.9
-
10
-
-
0028173586
-
Enod40, a gene expressed during nodule organogenesis, codes for a non-translatable RNA involved in plant growth
-
M. Crespi, E. Jurkevitch, M. Poiret, Y. d'Aubenton-Carafa, G. Petrovics, E. Kondorosi, and A. Kondorosi ENOD40, a gene expressed during nodule organogenesis, codes for a non-translatable RNA involved in plant growth EMBO J. 13 1994 5099 5112 (Pubitemid 24341091)
-
(1994)
EMBO Journal
, vol.13
, Issue.21
, pp. 5099-5112
-
-
Crespi, M.D.1
Jurkevitch, E.2
Poiret, M.3
D'Aubenton-Carafa, Y.4
Petrovics, G.5
Kondorosi, E.6
Kondorosi, A.7
-
11
-
-
0036301332
-
Secondary structure prediction for aligned RNA sequences
-
DOI 10.1016/S0022-2836(02)00308-X
-
I.L. Hofacker, M. Fekete, and P.F. Stadler Secondary structure prediction for aligned RNA sequences J. Mol. Biol. 319 2002 1059 1066 (Pubitemid 34729418)
-
(2002)
Journal of Molecular Biology
, vol.319
, Issue.5
, pp. 1059-1066
-
-
Hofacker, I.L.1
Fekete, M.2
Stadler, P.F.3
-
12
-
-
0037133258
-
Soybean ENOD40 encodes two peptides that bind to sucrose synthase
-
DOI 10.1073/pnas.022664799
-
H. Rohrig, J. Schmidt, E. Miklashevichs, J. Schell, and M. John Soybean ENOD40 encodes two peptides that bind to sucrose synthase Proc. Natl. Acad. Sci. U S A 99 2002 1915 1920 (Pubitemid 34168989)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.4
, pp. 1915-1920
-
-
Rohrig, H.1
Schmidt, J.2
Miklashevichs, E.3
Schell, J.4
John, M.5
-
13
-
-
0034751157
-
Translational and structural requirements of the early nodulin gene ENOD40, a short open reading frame-containing RNA, for elicitation of a cell-specific growth response in the alfalfa root cortex
-
C. Sousa, C. Johansson, C. Charon, H. Manyani, C. Sautter, A. Kondorosi, and M. Crespi Translational and structural requirements of the early nodulin gene ENOD40, a short open reading frame-containing RNA, for elicitation of a cell-specific growth response in the alfalfa root cortex Mol. Cell Biol. 21 2001 354 366
-
(2001)
Mol. Cell Biol.
, vol.21
, pp. 354-366
-
-
Sousa, C.1
Johansson, C.2
Charon, C.3
Manyani, H.4
Sautter, C.5
Kondorosi, A.6
Crespi, M.7
-
14
-
-
0344875483
-
Structural motifs in the RNA encoded by the early nodulation gene enod40 of soybean
-
DOI 10.1093/nar/gkg721
-
G. Girard, A. Roussis, A.P. Gultyaev, C.W.A. Pleij, and H.P. Spaink Structural motifs in the RNA encoded by the early nodulation gene ENOD40 of soybean Nucleic Acids Res. 31 2003 5003 5015 (Pubitemid 37441867)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.17
, pp. 5003-5015
-
-
Girard, G.1
Roussis, A.2
Gultyaev, A.P.3
Pleij, C.W.A.4
Spaink, H.P.5
-
15
-
-
1842712418
-
Enod40, a short open reading frame-containing mRNA, induces cytoplasmic localization of a nuclear RNA binding protein in Medicago truncatula
-
DOI 10.1105/tpc.019406
-
A. Campalans, A. Kondorosi, and M. Crespi ENOD40, a short open reading frame-containing mRNA, induces cytoplasmic localization of a nuclear RNA binding protein in Medicago truncatula Plant Cell 16 2004 1047 1059 (Pubitemid 38459222)
-
(2004)
Plant Cell
, vol.16
, Issue.4
, pp. 1047-1059
-
-
Campalans, A.1
Kondorosi, A.2
Crespi, M.3
-
16
-
-
0141792977
-
Phosphorylation of sucrose synthase at serine 170: Occurrence and possible role as a signal for proteolysis
-
DOI 10.1046/j.1365-313X.2003.01831.x
-
S.C. Hardin, G.Q. Tang, A. Scholz, D. Holtgraewe, H. Winter, and S.C. Huber Phosphorylation of sucrose synthase at serine 170: occurrence and possible role as a signal for proteolysis Plant J. 35 2003 588 603 (Pubitemid 37110714)
-
(2003)
Plant Journal
, vol.35
, Issue.5
, pp. 588-603
-
-
Hardin, S.C.1
Tang, G.-Q.2
Scholz, A.3
Holtgraewe, D.4
Winter, H.5
Huber, S.C.6
-
17
-
-
8444251689
-
Modification of soybean sucrose synthase by S-thiolation with ENOD40 peptide A
-
DOI 10.1016/j.bbrc.2004.10.100, PII S0006291X04024362
-
H. Röhrig, M. John, and J. Schmidt Modification of soybean sucrose synthase by S-thiolation with ENOD40 peptide A Biochem. Biophys. Res. Commun. 325 2004 864 870 (Pubitemid 39487952)
-
(2004)
Biochemical and Biophysical Research Communications
, vol.325
, Issue.3
, pp. 864-870
-
-
Rohrig, H.1
John, M.2
Schmidt, J.3
-
18
-
-
34248202149
-
A large number of novel coding small open reading frames in the intergenic regions of the Arabidopsis thaliana genome are transcribed and/or under purifying selection
-
DOI 10.1101/gr.5836207
-
K. Hanada, X. Zhang, J.O. Borevitz, W.H. Li, and S.H. Shiu A large number of novel genes encoding small open reading frames in the intergenic regions of the Arabidopsis thaliana genome are transcribed and/or under purifying selection Genome Res. 17 2007 632 640 (Pubitemid 46715514)
-
(2007)
Genome Research
, vol.17
, Issue.5
, pp. 632-640
-
-
Hanada, K.1
Zhang, X.2
Borevitz, J.O.3
Li, W.-H.4
Shiu, S.-H.5
-
19
-
-
0031252075
-
Promoter trap markers differentiate structural and positional components of polar development in Arabidopsis
-
DOI 10.1105/tpc.9.10.1713
-
J.F. Topping, and K. Lindsey Promoter trap markers differentiate structural and positional components of polar development in Arabidopsis Plant Cell 9 1997 1713 1725 (Pubitemid 28174081)
-
(1997)
Plant Cell
, vol.9
, Issue.10
, pp. 1713-1725
-
-
Topping, J.F.1
Lindsey, K.2
-
20
-
-
0036670296
-
The POLARIS gene of Arabidopsis encodes a predicted peptide required for correct root growth and leaf vascular patterning
-
DOI 10.1105/tpc.002618
-
S.A. Casson, P.M. Chilley, J.F. Topping, I.M. Evans, M.A. Souter, and K. Lindsey The POLARIS gene of Arabidopsis encodes a predicted peptide required for correct root growth and leaf vascular patterning Plant Cell 14 2002 1705 1721 (Pubitemid 35002930)
-
(2002)
Plant Cell
, vol.14
, Issue.8
, pp. 1705-1721
-
-
Casson, S.A.1
Chilley, P.M.2
Topping, J.F.3
Evans, I.M.4
Souter, M.A.5
Lindsey, K.6
-
21
-
-
33845764750
-
The POLARIS peptide of Arabidopsis regulates auxin transport root growth via effects on ethylene signaling
-
DOI 10.1105/tpc.106.040790
-
P.M. Chilley, S.A. Casson, P. Tarkowski, N. Hawkins, K.L.-C. Wang, P.J. Hussey, M. Beale, J.R. Ecker, G.K. Sandberg, and K. Lindseya The POLARIS peptide of Arabidopsis regulates auxin transport and root growth via effects on ethylene signaling Plant Cell 18 2006 3058 3072 (Pubitemid 46013276)
-
(2006)
Plant Cell
, vol.18
, Issue.11
, pp. 3058-3072
-
-
Chilley, P.M.1
Casson, S.A.2
Tarkowski, P.3
Hawkins, N.4
Wang, K.L.-C.5
Hussey, P.J.6
Beale, M.7
Ecker, J.R.8
Sandberg, G.K.9
Lindsey, K.10
-
22
-
-
2542525473
-
Overexpression of a novel small peptide Rotundifolia4 decreases cell proliferation and alters leaf shape in Arabidopsis thaliana
-
DOI 10.1111/j.1365-313X.2004.02078.x
-
N.N. Narita, S. Moore, G. Horiguchi, M. Kubo, T. Demura, H. Fukuda, J. Goodrich, and H. Tsukaya Over-expression of a novel small peptide ROTUNDIFOLIA4 decreases cell proliferation and alters leaf shape in Arabidopsis thaliana Plant J. 38 2004 699 713 (Pubitemid 38693384)
-
(2004)
Plant Journal
, vol.38
, Issue.4
, pp. 699-713
-
-
Narita, N.N.1
Moore, S.2
Horiguchi, G.3
Kubo, M.4
Demura, T.5
Fukuda, H.6
Goodrich, J.7
Tsukaya, H.8
-
23
-
-
18344370237
-
Control of proliferation, endoreduplication and differentiation by the Arabidopsis E2Fa-DPa transcription factor
-
DOI 10.1093/emboj/21.6.1360
-
L. De Veylder, T. Beeckman, G.T. Beemster, J. de Almeida Engler, S. Ormenese, S. Maes, M. Naudts, E. Van Der Schueren, A. Jacqmard, G. Engler, and D. Inzé Control of proliferation, endoreduplication and differentiation by the Arabidopsis E2Fa-DPa transcription factor EMBO J. 21 2002 1360 1368 (Pubitemid 34246514)
-
(2002)
EMBO Journal
, vol.21
, Issue.6
, pp. 1360-1368
-
-
De Veylder, L.1
Beeckman, T.2
Beemster, G.T.S.3
De Almeida Engler, J.4
Ormenese, S.5
Maes, S.6
Naudts, M.7
Van Der Schueren, E.8
Jacqmard, A.9
Engler, G.10
Inze, D.11
-
24
-
-
44849109555
-
Trans-regulation of the expression of the transcription factor MtHAP2-1 by a uORF controls root nodule development
-
DOI 10.1101/gad.461808
-
J.P. Combier, F. de Billy, P. Gamas, A. Niebel, and S. Rivas Trans-regulation of the expression of the transcription factor MtHAP2-1 by a uORF controls root nodule development Genes Dev. 22 2008 1549 1559 (Pubitemid 351793088)
-
(2008)
Genes and Development
, vol.22
, Issue.11
, pp. 1549-1559
-
-
Combier, J.P.1
De Billy, F.2
Gamas, P.3
Niebel, A.4
Rivas, S.5
-
25
-
-
49449106557
-
Evidence for the involvement in nodulation of the two small putative regulatory peptide-encoding genes MtRALFL1 and MtDVL1
-
J.P. Combier, H. Küster, E.P. Journet, N. Hohnjec, P. Gamas, and A. Niebel Evidence for the involvement in nodulation of the two small putative regulatory peptide-encoding genes MtRALFL1 and MtDVL1 Mol. Plant. Microbe. Interact. 21 2008 1118 1127
-
(2008)
Mol. Plant. Microbe. Interact.
, vol.21
, pp. 1118-1127
-
-
Combier, J.P.1
Küster, H.2
Journet, E.P.3
Hohnjec, N.4
Gamas, P.5
Niebel, A.6
-
26
-
-
12244275645
-
Widespread occurrence of antisense transcription in the human genome
-
DOI 10.1038/nbt808
-
R. Yelin, D. Dahary, R. Sorek, E.Y. Levanon, O. Goldstein, A. Shoshan, A. Diber, S. Biton, Y. Tamir, R. Khosravi, S. Nemzer, E. Pinner, S. Walach, J. Bernstein, K. Savitsky, and G. Rotman Widespread occurrence of antisense transcription in the human genome Nat. Biotechnol. 21 2003 379 386 (Pubitemid 36397657)
-
(2003)
Nature Biotechnology
, vol.21
, Issue.4
, pp. 379-386
-
-
Yelin, R.1
Dahary, D.2
Sorek, R.3
Levanon, E.Y.4
Goldstein, O.5
Shoshan, A.6
Diber, A.7
Biton, S.8
Tamir, Y.9
Khosravi, R.10
Nemzer, S.11
Pinner, E.12
Walach, S.13
Bernstein, J.14
Savitsky, K.15
Rotman, G.16
-
27
-
-
24644448635
-
Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana
-
X.J. Wang, T. Gaasterland, and N.H. Chua Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana Genome Biol. 6 2005 R30
-
(2005)
Genome Biol.
, vol.6
, pp. 30
-
-
Wang, X.J.1
Gaasterland, T.2
Chua, N.H.3
-
28
-
-
34447132252
-
Distinct expression patterns of natural antisense transcripts in Arabidopsis
-
DOI 10.1104/pp.107.100396
-
S.R. Henz, J.S. Cumbie, K.D. Kasschau, J.U. Lohmann, J.C. Carrington, D. Weigel, and M. Schmid Distinct expression patterns of natural antisense transcripts in Arabidopsis Plant Physiol. 144 2007 1247 1255 (Pubitemid 47037440)
-
(2007)
Plant Physiology
, vol.144
, Issue.3
, pp. 1247-1255
-
-
Henz, S.R.1
Cumbie, J.S.2
Kasschau, K.D.3
Lohmann, J.U.4
Carrington, J.C.5
Weigel, D.6
Schmid, M.7
-
29
-
-
24644488895
-
Natural antisense transcripts with coding capacity in Arabidopsis may have a regulatory role that is not linked to double-stranded RNA degradation
-
C.H. Jen, I. Michalopoulos, D.R. Westhead, and P. Meyer Natural antisense transcripts with coding capacity in Arabidopsis may have a regulatory role that is not linked to double-stranded RNA degradation Genome Biol. 6 2005 R51
-
(2005)
Genome Biol.
, vol.6
, pp. 51
-
-
Jen, C.H.1
Michalopoulos, I.2
Westhead, D.R.3
Meyer, P.4
-
30
-
-
33845395154
-
Prediction of trans-antisense transcripts in Arabidopsis thaliana
-
H. Wang, N.H. Chua, and X.J. Wang Prediction of trans-antisense transcripts in Arabidopsis thaliana Genome Biol. 7 2006 R92
-
(2006)
Genome Biol.
, vol.7
, pp. 92
-
-
Wang, H.1
Chua, N.H.2
Wang, X.J.3
-
31
-
-
29244490062
-
Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis
-
DOI 10.1016/j.cell.2005.11.035, PII S0092867405013309
-
O. Borsani, J. Zhu, P.E. Verslues, R. Sunkar, and J.K. Zhu Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis Cell 123 2005 1279 1291 (Pubitemid 41821785)
-
(2005)
Cell
, vol.123
, Issue.7
, pp. 1279-1291
-
-
Borsani, O.1
Zhu, J.2
Verslues, P.E.3
Sunkar, R.4
Zhu, J.-K.5
-
32
-
-
36849089069
-
A natural antisense transcript of the Petunia hybrida Sho gene suggests a role for an antisense mechanism in cytokinin regulation
-
DOI 10.1111/j.1365-313X.2007.03309.x
-
E. Zubko, and P. Meyer A natural antisense transcript of the Petunia hybrida Sho gene suggests a role for an antisense mechanism in cytokinin regulation Plant J. 52 2007 1131 1139 (Pubitemid 350231159)
-
(2007)
Plant Journal
, vol.52
, Issue.6
, pp. 1131-1139
-
-
Zubko, E.1
Meyer, P.2
-
33
-
-
58149503664
-
Small-interfering RNAs from natural antisense transcripts derived from a cellulose synthase gene modulate cell wall biosynthesis in barley
-
M.A. Held, B. Penning, A.S. Brandt, S.A. Kessans, W. Yong, S.R. Scofield, and N.C. Carpita Small-interfering RNAs from natural antisense transcripts derived from a cellulose synthase gene modulate cell wall biosynthesis in barley Proc. Natl. Acad. Sci. U S A 105 2008 20534 20539
-
(2008)
Proc. Natl. Acad. Sci. U S A
, vol.105
, pp. 20534-20539
-
-
Held, M.A.1
Penning, B.2
Brandt, A.S.3
Kessans, S.A.4
Yong, W.5
Scofield, S.R.6
Carpita, N.C.7
-
34
-
-
79551653792
-
Sense and antisense transcripts of convergent gene pairs in Arabidopsis thaliana can share a common polyadenylation region
-
E. Zubko, A. Kunova, and P. Meyer Sense and antisense transcripts of convergent gene pairs in Arabidopsis thaliana can share a common polyadenylation region PLoS ONE 6 2011 e16769
-
(2011)
PLoS ONE
, vol.6
, pp. 16769
-
-
Zubko, E.1
Kunova, A.2
Meyer, P.3
-
35
-
-
77949537126
-
Characterization of the rice PHO1 gene family reveals a key role for OsPHO1;2 in phosphate homeostasis and the evolution of a distinct clade in dicotyledons
-
D. Secco, A. Baumann, and Y. Poirier Characterization of the rice PHO1 gene family reveals a key role for OsPHO1;2 in phosphate homeostasis and the evolution of a distinct clade in dicotyledons Plant Physiol. 152 2010 1693 1704
-
(2010)
Plant Physiol.
, vol.152
, pp. 1693-1704
-
-
Secco, D.1
Baumann, A.2
Poirier, Y.3
-
36
-
-
61449126060
-
Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses
-
B. Ben Amor, S. Wirth, F. Merchan, P. Laporte, Y. d'Aubenton-Carafa, J. Hirsch, A. Maizel, A. Mallory, A. Lucas, J.M. Deragon, H. Vaucheret, C. Thermes, and M. Crespi Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses Genome Res. 19 2009 57 69
-
(2009)
Genome Res.
, vol.19
, pp. 57-69
-
-
Ben Amor, B.1
Wirth, S.2
Merchan, F.3
Laporte, P.4
D'Aubenton-Carafa, Y.5
Hirsch, J.6
Maizel, A.7
Mallory, A.8
Lucas, A.9
Deragon, J.M.10
Vaucheret, H.11
Thermes, C.12
Crespi, M.13
-
37
-
-
42449150879
-
Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs)
-
DOI 10.1073/pnas.0708743105
-
C. Lu, D.H. Jeong, K. Kulkarni, M. Pillay, K. Nobuta, R. German, S.R. Thatcher, C. Maher, L. Zhang, D. Ware, B. Liu, X. Cao, B.C. Meyers, and P.J. Green Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs) Proc. Natl. Acad. Sci. U S A 105 2008 4951 4956 (Pubitemid 351753852)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.12
, pp. 4951-4956
-
-
Lu, C.1
Jeong, D.-H.2
Kulkarni, K.3
Pillay, M.4
Nobuta, K.5
German, R.6
Thatcher, S.R.7
Maher, C.8
Zhang, L.9
Ware, D.10
Liu, B.11
Cao, X.12
Meyers, B.C.13
Green, P.J.14
-
39
-
-
36248993549
-
The RNA Continent
-
DOI 10.1016/S0065-230X(07)99003-X, PII S0065230X0799003X
-
J. Yasuda, and Y. Hayashizaki The RNA continent Adv. Cancer Res. 99 2008 77 112 (Pubitemid 350137253)
-
(2008)
Advances in Cancer Research
, vol.99
, pp. 77-112
-
-
Yasuda, J.1
Hayashizaki, Y.2
-
41
-
-
0242300620
-
Empirical Analysis of Transcriptional Activity in the Arabidopsis Genome
-
DOI 10.1126/science.1088305
-
K. Yamada, J. Lim, J.M. Dale, H. Chen, and P. Shinn Empirical analysis of transcriptional activity in the Arabidopsis genome Science 302 2003 842 846 (Pubitemid 37339620)
-
(2003)
Science
, vol.302
, Issue.5646
, pp. 842-846
-
-
Yamada, K.1
Lim, J.2
Dale, J.H.3
Chen, H.4
Shinn, P.5
Palm, C.J.6
Southwick, A.M.7
Wu, H.C.8
Kim, C.9
Nguyen, M.10
Pham, P.11
Cheuk, R.12
Karlin-Newmann, G.13
Liu, S.X.14
Lam, B.15
Sakano, H.16
Wu, T.17
Yu, G.18
Miranda, M.19
Quach, H.L.20
Tripp, M.21
Chang, C.H.22
Lee, J.M.23
Toriumi, M.24
Chan, M.M.H.25
Tang, C.C.26
Onodera, C.S.27
Deng, J.M.28
Akiyama, K.29
Ansari, Y.30
Arakawa, T.31
Banh, J.32
Banno, F.33
Bowser, L.34
Brooks, S.35
Carninci, P.36
Chao, Q.37
Choy, N.38
Enju, A.39
Goldsmith, A.D.40
Gurjal, M.41
Hansen, N.F.42
Hayashizaki, Y.43
Johnson-Hopson, C.44
Hsuan, V.W.45
Iida, K.46
Karnes, M.47
Khan, S.48
Koesema, E.49
Ishida, J.50
Jiang, P.X.51
Jones, T.52
Kawai, J.53
Kamiya, A.54
Meyers, C.55
Nakajima, M.56
Narusaka, M.57
Seki, M.58
Sakurai, T.59
Satou, M.60
Tamse, R.61
Vaysberg, M.62
Wallender, E.K.63
Wong, C.64
Yamamura, Y.65
Yuan, S.66
Shinozaki, K.67
Davis, R.W.68
Theologis, A.69
Ecker, J.R.70
more..
-
42
-
-
77951115595
-
RNA dust: Where are the genes?
-
P. Carninci RNA dust: where are the genes? DNA Res. 17 2010 51 59
-
(2010)
DNA Res.
, vol.17
, pp. 51-59
-
-
Carninci, P.1
-
44
-
-
60149086351
-
Origin, biogenesis, and activity of plant microRNAs
-
O. Voinnet Origin, biogenesis, and activity of plant microRNAs Cell 136 2009 669 687
-
(2009)
Cell
, vol.136
, pp. 669-687
-
-
Voinnet, O.1
-
45
-
-
74049114522
-
Biotic stress-associated microRNAs: Identification, detection, regulation, and functional analysis
-
F. Jay, J.P. Renou, O. Voinnet, and L. Navarro Biotic stress-associated microRNAs: identification, detection, regulation, and functional analysis Methods Mol. Biol. 592 2010 183 202
-
(2010)
Methods Mol. Biol.
, vol.592
, pp. 183-202
-
-
Jay, F.1
Renou, J.P.2
Voinnet, O.3
Navarro, L.4
-
46
-
-
78049275325
-
MicroRNAs with macro-effects on plant stress responses
-
R. Sunkar MicroRNAs with macro-effects on plant stress responses Semin. Cell. Dev. Biol. 21 2010 805 811
-
(2010)
Semin. Cell. Dev. Biol.
, vol.21
, pp. 805-811
-
-
Sunkar, R.1
-
47
-
-
33645528966
-
Post-transcriptional small RNA pathways in plants: Mechanisms and regulations
-
H. Vaucheret Post-transcriptional small RNA pathways in plants: mechanisms and regulations Genes Dev. 20 2006 759 771
-
(2006)
Genes Dev.
, vol.20
, pp. 759-771
-
-
Vaucheret, H.1
-
48
-
-
70350020737
-
Reconstruction of Arabidopsis thaliana fully integrated small RNA pathway
-
S.A. Jamalkandi, and A. Masoudi-Nejad Reconstruction of Arabidopsis thaliana fully integrated small RNA pathway Funct. Integr. Genomics 9 2009 419 432
-
(2009)
Funct. Integr. Genomics
, vol.9
, pp. 419-432
-
-
Jamalkandi, S.A.1
Masoudi-Nejad, A.2
-
50
-
-
0038076109
-
Negative feedback regulation of Dicer-Like1 in Arabidopsis by microRNA-guided mRNA degradation
-
DOI 10.1016/S0960-9822(03)00281-1
-
Z. Xie, K.D. Kasschau, and J.C. Carrington Negative feedback regulation of Dicer-Like1 in Arabidopsis by microRNA-guided mRNA degradation Curr. Biol. 13 2003 784 789 (Pubitemid 36531029)
-
(2003)
Current Biology
, vol.13
, Issue.9
, pp. 784-789
-
-
Xie, Z.1
Kasschau, K.D.2
Carrington, J.C.3
-
51
-
-
56549111129
-
The air noncoding RNA epigenetically silences transcription by targeting G9a to chromatin
-
T. Nagano, J.A. Mitchell, L.A. Sanz, F.M. Pauler, A.C. Ferguson-Smith, R. Feil, and P. Fraser The air noncoding RNA epigenetically silences transcription by targeting G9a to chromatin Science 322 2008 1717 1720
-
(2008)
Science
, vol.322
, pp. 1717-1720
-
-
Nagano, T.1
Mitchell, J.A.2
Sanz, L.A.3
Pauler, F.M.4
Ferguson-Smith, A.C.5
Feil, R.6
Fraser, P.7
-
52
-
-
54049138948
-
Kcnq1ot1 antisense non-coding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation
-
R.R. Pandey, T. Mondal, F. Mohammad, S. Enroth, L. Redrup, J. Komorowski, T. Nagano, D. Mancini-Dinardo, and C. Kanduri Kcnq1ot1 antisense non-coding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation Mol. Cell 32 2008 232 246
-
(2008)
Mol. Cell
, vol.32
, pp. 232-246
-
-
Pandey, R.R.1
Mondal, T.2
Mohammad, F.3
Enroth, S.4
Redrup, L.5
Komorowski, J.6
Nagano, T.7
Mancini-Dinardo, D.8
Kanduri, C.9
-
53
-
-
55349100420
-
Polycomb group proteins Ezh2 and Rnf2 direct genomic contraction and imprinted repression in early mouse embryos
-
R. Terranova, S. Yokobayashi, M.B. Stadler, A.P. Otte, M. van Lohuizen, S.H. Orkin, and A.H. Peters Polycomb group proteins Ezh2 and Rnf2 direct genomic contraction and imprinted repression in early mouse embryos Dev. Cell 15 2008 668 679
-
(2008)
Dev. Cell
, vol.15
, pp. 668-679
-
-
Terranova, R.1
Yokobayashi, S.2
Stadler, M.B.3
Otte, A.P.4
Van Lohuizen, M.5
Orkin, S.H.6
Peters, A.H.7
-
54
-
-
60149092541
-
The long noncoding RNA Kcnq1ot1 organises a lineage-specific nuclear domain for epigenetic gene silencing
-
L. Redrup, M.R. Branco, E.R. Perdeaux, C. Krueger, A. Lewis, F. Santos, T. Nagano, B.S. Cobb, P. Fraser, and W. Reik The long noncoding RNA Kcnq1ot1 organises a lineage-specific nuclear domain for epigenetic gene silencing Development 136 2009 525 530
-
(2009)
Development
, vol.136
, pp. 525-530
-
-
Redrup, L.1
Branco, M.R.2
Perdeaux, E.R.3
Krueger, C.4
Lewis, A.5
Santos, F.6
Nagano, T.7
Cobb, B.S.8
Fraser, P.9
Reik, W.10
-
55
-
-
34250729138
-
Functional Demarcation of Active and Silent Chromatin Domains in Human HOX Loci by Noncoding RNAs
-
DOI 10.1016/j.cell.2007.05.022, PII S0092867407006599
-
J.L. Rinn, M. Kertesz, J.K. Wang, S.L. Squazzo, X. Xu, S.A. Brugmann, L.H. Goodnough, J.A. Helms, P.J. Farnham, E. Segal, and H.Y. Chang Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs Cell 129 2007 1311 1323 (Pubitemid 46962090)
-
(2007)
Cell
, vol.129
, Issue.7
, pp. 1311-1323
-
-
Rinn, J.L.1
Kertesz, M.2
Wang, J.K.3
Squazzo, S.L.4
Xu, X.5
Brugmann, S.A.6
Goodnough, L.H.7
Helms, J.A.8
Farnham, P.J.9
Segal, E.10
Chang, H.Y.11
-
56
-
-
78650966670
-
Vernalization-mediated epigenetic silencing by a long intronic non-coding RNA
-
J.B. Heo, and S. Sung Vernalization-mediated epigenetic silencing by a long intronic non-coding RNA Science 331 2010 76 79
-
(2010)
Science
, vol.331
, pp. 76-79
-
-
Heo, J.B.1
Sung, S.2
-
57
-
-
72049133207
-
Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target
-
S. Swiezewski, F. Liu, A. Magusin, and C. Dean Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target Nature 462 2009 799 802
-
(2009)
Nature
, vol.462
, pp. 799-802
-
-
Swiezewski, S.1
Liu, F.2
Magusin, A.3
Dean, C.4
-
58
-
-
33745442032
-
Characterization of 43 non-protein-coding mRNA genes in arabidopsis, including the MIR162a-derived transcripts
-
DOI 10.1104/pp.105.073817
-
J. Hirsch, V. Lefort, M. Vankersschaver, A. Boualem, A. Lucas, C. Thermes, Y. d'Aubenton-Carafa, and M. Crespi Characterization of 43 non-protein-coding mRNA genes in Arabidopsis, including the MIR162a-derived transcripts Plant Physiol. 140 2006 1192 1204 (Pubitemid 43956207)
-
(2006)
Plant Physiology
, vol.140
, Issue.4
, pp. 1192-1204
-
-
Hirsch, J.1
Lefort, V.2
Vankersschaver, M.3
Bouaiem, A.4
Lucas, A.5
Thermes, C.6
D'Aubenton-Carafa, Y.7
Crespi, M.8
-
59
-
-
55549095159
-
A novel RNA-binding protein associated with cell plate formation
-
DOI 10.1104/pp.108.120527
-
L. Ma, B. Xie, Z. Hong, D.P.S. Verma, and Z. Zhang A novel RNA-binding protein associated with cell plate formation Plant Physiol. 148 2008 223 234 (Pubitemid 352847598)
-
(2008)
Plant Physiology
, vol.148
, Issue.1
, pp. 223-234
-
-
Ma, L.1
Xie, B.2
Hong, Z.3
Verma, D.P.S.4
Zhang, Z.5
-
60
-
-
69249083629
-
Genome-wide identification of small RNA targets based on target enrichment and microarray hybridizations
-
J.M. Franco-Zorrilla, F.J. Del Toro, M. Godoy, J. Perez-Perez, I. Lopez-Vidriero, J.C. Oliveros, G. Garcia-Casado, C. Llave, and R. Solano Genome-wide identification of small RNA targets based on target enrichment and microarray hybridizations Plant J. 59 2009 840 850
-
(2009)
Plant J.
, vol.59
, pp. 840-850
-
-
Franco-Zorrilla, J.M.1
Del Toro, F.J.2
Godoy, M.3
Perez-Perez, J.4
Lopez-Vidriero, I.5
Oliveros, J.C.6
Garcia-Casado, G.7
Llave, C.8
Solano, R.9
|