-
1
-
-
85025404569
-
Weeksella virosa gen. nov., sp. nov. (formerly group IIf) found in human clinical specimens
-
Holmes B, Steigerwaldt AG, Weaver RE, Brenner DJ. Weeksella virosa gen. nov., sp. nov. (formerly group IIf) found in human clinical specimens. Syst Appl Microbiol 1986; 8:185-190.
-
(1986)
Syst Appl Microbiol
, vol.8
, pp. 185-190
-
-
Holmes, B.1
Steigerwaldt, A.G.2
Weaver, R.E.3
Brenner, D.J.4
-
2
-
-
77955908592
-
NamesforLife. BrowserTool takes ex-pertise out of the database and puts it right in the browser
-
Garrity G. NamesforLife. BrowserTool takes ex-pertise out of the database and puts it right in the browser. Microbiol Today 2010; 37:9.
-
(2010)
Microbiol Today
, vol.37
, pp. 9
-
-
Garrity, G.1
-
3
-
-
0035136771
-
Oral colonization of aerobic and facultatively anaerobic gram-negative rods and cocci in irra-diated, dentate, xerostomic individuals
-
PubMed doi:10.1034/j.1399-302x.2001.160101.x
-
Leung WK, Jin LJ, Yam WC, Samaranayake LP. Oral colonization of aerobic and facultatively anaerobic gram-negative rods and cocci in irra-diated, dentate, xerostomic individuals. Oral Mi-crobiol Immunol 2001; 16:1-9. PubMed doi:10.1034/j.1399-302x.2001.160101.x
-
(2001)
Oral Mi-crobiol Immunol
, vol.16
, pp. 1-9
-
-
Leung, W.K.1
Jin, L.J.2
Yam, W.C.3
Samaranayake, L.P.4
-
4
-
-
0023841026
-
Incidence of vaginal Week-sella virosa (formerly group IIf)
-
PubMed doi:10.1136/jcp.41.2.211
-
Mardy C, Holmes B. Incidence of vaginal Week-sella virosa (formerly group IIf). J Clin Pathol 1988; 41:211-214. PubMed doi:10.1136/jcp.41.2.211
-
(1988)
J Clin Pathol
, vol.41
, pp. 211-214
-
-
Mardy, C.1
Holmes, B.2
-
5
-
-
0025040346
-
Micro-biological characteristics of Weeksella virosa (formerly CDC group IIf) isolated from the human genitourinary tract
-
PubMed
-
Reina J, Gil J, Salva F, Gomez J, Alomar P. Micro-biological characteristics of Weeksella virosa (formerly CDC group IIf) isolated from the human genitourinary tract. J Clin Microbiol 1990; 28:2357-2359. PubMed
-
(1990)
J Clin Microbiol
, vol.28
, pp. 2357-2359
-
-
Reina, J.1
Gil, J.2
Salva, F.3
Gomez, J.4
Alomar, P.5
-
6
-
-
34250738513
-
Aerococcus suis sp. nov., isolated from clinical specimens from swine
-
PubMed doi:10.1099/ijs.0.64537-0
-
Vela AI, García N, Latre MV, Casamayor A, Sán-chez-Porro C, Briones V, Ventosa A, Domínguez L, Fernández-Garayzábal JF. Aerococcus suis sp. nov., isolated from clinical specimens from swine. Int J Syst Evol Microbiol 2007; 57:1291-1294. PubMed doi:10.1099/ijs.0.64537-0
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 1291-1294
-
-
Vela, A.I.1
García, N.2
Latre, M.V.3
Casamayor, A.4
Sán-chez-Porro, C.5
Briones, V.6
Ventosa, A.7
Domínguez, L.8
Fernández-Garayzábal, J.F.9
-
7
-
-
48949087072
-
Lymphoepitheli-oma-like carcinoma of the urinary bladder in a cow associated with bovine papillomavirus type-2
-
Published on-line August 3, 2008. PubMed doi:10.1016/j.jcpa.2008.06.002
-
Brun R, Urraro C, Medaglia C, Russo V, Borzac-chiello G, Roperto F, Roperto S. Lymphoepitheli-oma-like carcinoma of the urinary bladder in a cow associated with bovine papillomavirus type-2. J Comp Pathol 2008; 139:121-125.Published on-line August 3, 2008. PubMed doi:10.1016/j.jcpa.2008.06.002
-
(2008)
J Comp Pathol
, vol.139
, pp. 121-125
-
-
Brun, R.1
Urraro, C.2
Medaglia, C.3
Russo, V.4
Borzac-Chiello, G.5
Roperto, F.6
Roperto, S.7
-
8
-
-
57349172087
-
Study on the bacterial midgut mi-crobiota associated to different Brazilian popula-tions of Lutzomyia longipalpis (Lutz & Neiva) (Diptera: Psychodidae)
-
PubMed doi:10.1590/S1519-566X2008000500016
-
Gouveia C, Asensi MD, Zahner V, Rangel EF, Oliveira SM. Study on the bacterial midgut mi-crobiota associated to different Brazilian popula-tions of Lutzomyia longipalpis (Lutz & Neiva) (Diptera: Psychodidae). Neotrop Entomol 2008; 37:597-601. PubMed doi:10.1590/S1519-566X2008000500016
-
(2008)
Neotrop Entomol
, vol.37
, pp. 597-601
-
-
Gouveia, C.1
Asensi, M.D.2
Zahner, V.3
Rangel, E.F.4
Oliveira, S.M.5
-
9
-
-
0031921117
-
The incidence of Weeksella- and Bergeyella-like bacteria in the food environment
-
PubMed doi:10.1046/j.1365-2672.1998.00346.x
-
Botha WC, Jooste PJ, Hugo CJ. The incidence of Weeksella- and Bergeyella-like bacteria in the food environment. J Appl Microbiol 1998; 84:349-356. PubMed doi:10.1046/j.1365-2672.1998.00346.x
-
(1998)
J Appl Microbiol
, vol.84
, pp. 349-356
-
-
Botha, W.C.1
Jooste, P.J.2
Hugo, C.J.3
-
10
-
-
0024463587
-
The taxonomic relationship of certain environmental flavobacte-ria to the genus Weeksella
-
PubMed
-
Botha WC, Jooste PJ, Britz TJ. The taxonomic relationship of certain environmental flavobacte-ria to the genus Weeksella. J Appl Bacteriol 1989; 67:551-559. PubMed
-
(1989)
J Appl Bacteriol
, vol.67
, pp. 551-559
-
-
Botha, W.C.1
Jooste, P.J.2
Britz, T.J.3
-
11
-
-
80053353901
-
The genera Bergeyel-la and Weeksella
-
Dworkin M, Falkow S, Rosenberg E, Schleifer K-H and Stacke-brandt E (eds)
-
Hugo CJ, Bruun B, Jooste PJ. The genera Bergeyel-la and Weeksella. In: The Prokaryotes, vol. 7: Pro-teobacteria: Delta, Epsilon Subclass. Dworkin M, Falkow S, Rosenberg E, Schleifer K-H and Stacke-brandt E (eds). 2006; 523-538.
-
(2006)
The Prokaryotes, Pro-teobacteria: Delta, Epsilon Subclass
, vol.7
, pp. 523-538
-
-
Hugo, C.J.1
Bruun, B.2
Jooste, P.J.3
-
12
-
-
0031726444
-
Lopez Sanroman. A case of spontaneous peritonitis caused by Weeksella viro-sa
-
PubMed doi:10.1097/00042737-199810000-00016
-
Boixeda D, de Luis DA, Meseguer MA, Aller R, Martin de Argila C. Lopez Sanroman. A case of spontaneous peritonitis caused by Weeksella viro-sa. Eur J Gastroenterol Hepatol 1998; 10:897-898. PubMed doi:10.1097/00042737-199810000-00016
-
(1998)
Eur J Gastroenterol Hepatol
, vol.10
, pp. 897-898
-
-
Boixeda, D.1
de Luis, D.A.2
Meseguer, M.A.3
Aller, R.4
de Martin, A.C.5
-
13
-
-
67650340717
-
How many bootstrap replicates are necessary?
-
doi:10.1007/978-3-642-02008-7_13
-
Pattengale ND, Alipour M, Bininda-Emonds ORP, Moret BME, Stamatakis A. How many bootstrap replicates are necessary? Lect Notes Comput Sci 2009; 5541:184-200. doi:10.1007/978-3-642-02008-7_13
-
(2009)
Lect Notes Comput Sci
, vol.5541
, pp. 184-200
-
-
Pattengale, N.D.1
Alipour, M.2
Bininda-Emonds, O.R.P.3
Moret, B.M.E.4
Stamatakis, A.5
-
14
-
-
33746061683
-
Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Com-patible with ARB
-
PubMed doi:10.1128/AEM.03006-05
-
DeSantis TZ, Hugenholtz P, Larsen N, Rojas M, Brodie EL, Keller K, Huber T, Dalevi D, Hu P, Andersen GL. Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Com-patible with ARB. Appl Environ Microbiol 2006; 72:5069-5072. PubMed doi:10.1128/AEM.03006-05
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5069-5072
-
-
Desantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
Rojas, M.4
Brodie, E.L.5
Keller, K.6
Huber, T.7
Dalevi, D.8
Hu, P.9
Andersen, G.L.10
-
16
-
-
36549086376
-
An introduction to the family Flavobacteriaceae
-
Dwor-kin M, Falkow S, Rosenberg E, Schleifer K-H and Stackebrandt E (eds)
-
Bernardet JF, Nakagawa Y. An introduction to the family Flavobacteriaceae. In: The Prokaryotes, vol. 7: Proteobacteria: Delta, Epsilon Subclass. Dwor-kin M, Falkow S, Rosenberg E, Schleifer K-H and Stackebrandt E (eds). 2006; 455-480.
-
(2006)
The Prokaryotes, Proteobacteria: Delta, Epsilon Subclass
, vol.7
, pp. 455-480
-
-
Bernardet, J.F.1
Nakagawa, Y.2
-
17
-
-
33750007636
-
Description of Wauter-siella falsenii gen. nov., sp. nov., to accommodate clinical isolates phenotypically resembling mem-bers of the genera Chryseobacterium and Empedobacter
-
PubMed doi:10.1099/ijs.0.64393-0
-
Kämpfer P, Avesani V, Janssens M, Charlier J, De Baere T, Vaneechoutte M. Description of Wauter-siella falsenii gen. nov., sp. nov., to accommodate clinical isolates phenotypically resembling mem-bers of the genera Chryseobacterium and Empedobacter. Int J Syst Evol Microbiol 2006; 56:2323-2329. PubMed doi:10.1099/ijs.0.64393-0
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 2323-2329
-
-
Kämpfer, P.1
Avesani, V.2
Janssens, M.3
Charlier, J.4
de Baere, T.5
Vaneechoutte, M.6
-
18
-
-
31144477042
-
Culturable phylogenetic diversity of the phylum 'Bacteroidetes' from river epilithon and coastal water and description of novel members of the family Flavobacteriaceae: Epilithonimonas tenax gen. nov., sp. nov. and Per-sicivirga xylanidelens gen.nov., sp. nov
-
PubMed doi:10.1099/ijs.0.63941-0
-
O'Sullivan LA, Rinna J, Humphreys G, Weightman AJ, Fry JC. Culturable phylogenetic diversity of the phylum 'Bacteroidetes' from river epilithon and coastal water and description of novel members of the family Flavobacteriaceae: Epilithonimonas tenax gen. nov., sp. nov. and Per-sicivirga xylanidelens gen.nov., sp. nov. Int J Syst Evol Microbiol 2006; 56:169-180. PubMed doi:10.1099/ijs.0.63941-0
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 169-180
-
-
O'Sullivan, L.A.1
Rinna, J.2
Humphreys, G.3
Weightman, A.J.4
Fry, J.C.5
-
19
-
-
0012185460
-
Chryseobacterium joostei sp. nov., iso-lated from the dairy environment
-
PubMed doi:10.1099/ijs.0.02232-0
-
Hugo CJ, Segers P, Hoste B, Vancanneyt M, Ker-sters K. Chryseobacterium joostei sp. nov., iso-lated from the dairy environment. Int J Syst Evol Microbiol 2003; 53:771-777. PubMed doi:10.1099/ijs.0.02232-0
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 771-777
-
-
Hugo, C.J.1
Segers, P.2
Hoste, B.3
Vancanneyt, M.4
Ker-Sters, K.5
-
20
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
PubMed
-
Castresana J. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol 2000; 17:540-552. PubMed
-
(2000)
Mol Biol Evol
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
21
-
-
0036203448
-
Multiple sequence alignment using partial order graphs
-
PubMed doi:10.1093/bioinformatics/18.3.452
-
Lee C, Grasso C, Sharlow MF. Multiple sequence alignment using partial order graphs. Bioinformat-ics 2002; 18:452-464. PubMed doi:10.1093/bioinformatics/18.3.452
-
(2002)
Bioinformatics
, vol.18
, pp. 452-464
-
-
Lee, C.1
Grasso, C.2
Sharlow, M.F.3
-
22
-
-
50249100595
-
A rapid bootstrap algorithm for the RAxML Web servers
-
PubMed doi:10.1080/10635150802429642
-
Stamatakis A, Hoover P, Rougemont J. A rapid bootstrap algorithm for the RAxML Web servers. Syst Biol 2008; 57:758-771. PubMed doi:10.1080/10635150802429642
-
(2008)
Syst Biol
, vol.57
, pp. 758-771
-
-
Stamatakis, A.1
Hoover, P.2
Rougemont, J.3
-
23
-
-
75549086416
-
The Genomes On Line Database (GOLD) in 2009: Sta-tus of genomic and metagenomic projects and their associated metadata
-
PubMed doi:10.1093/nar/gkp848
-
Liolios K, Chen IM, Mavromatis K, Tavernarakis N, Hugenholtz P, Markowitz VM, Kyrpides NC. The Genomes On Line Database (GOLD) in 2009: sta-tus of genomic and metagenomic projects and their associated metadata. Nucleic Acids Res 2010; 38:D346-D354. PubMed doi:10.1093/nar/gkp848
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Liolios, K.1
Chen, I.M.2
Mavromatis, K.3
Tavernarakis, N.4
Hugenholtz, P.5
Markowitz, V.M.6
Kyrpides, N.C.7
-
24
-
-
80053376480
-
Complete genome sequence of Riemerella anatipestifer type strain (BrunerT)
-
Han C, Goodwin L, Pitluck S, Liolios L, Pagani I, Ivanova N, Mikhailova N, Pati A, Chen A, Palia-nappan K, et al. Complete genome sequence of Riemerella anatipestifer type strain (BrunerT). Stand Genomic Sci 2011; 4(2).
-
(2011)
Stand Genomic Sci
, vol.4
, Issue.2
-
-
Han, C.1
Goodwin, L.2
Pitluck, S.3
Liolios, L.4
Pagani, I.5
Ivanova, N.6
Mikhailova, N.7
Pati, A.8
Chen, A.9
Palia-Nappan, K.10
-
25
-
-
43449108562
-
The minimum information about a genome sequence (MIGS) specification
-
PubMed doi:10.1038/nbt1360
-
Field D, Garrity G, Gray T, Morrison N, Selengut J, Sterk P, Tatusova T, Thomson N, Allen MJ, Angi-uoli SV, et al. The minimum information about a genome sequence (MIGS) specification. Nat Bio-technol 2008; 26:541-547. PubMed doi:10.1038/nbt1360
-
(2008)
Nat Bio-technol
, vol.26
, pp. 541-547
-
-
Field, D.1
Garrity, G.2
Gray, T.3
Morrison, N.4
Selengut, J.5
Sterk, P.6
Tatusova, T.7
Thomson, N.8
Allen, M.J.9
Angi-Uoli, S.V.10
-
26
-
-
0025300402
-
Towards a natural system of organisms: Proposal for the do-mains Archaea, Bacteria, and Eucarya
-
PubMed doi:10.1073/pnas.87.12.4576
-
Woese CR, Kandler O, Wheelis ML. Towards a natural system of organisms: proposal for the do-mains Archaea, Bacteria, and Eucarya. Proc Natl Acad Sci USA 1990; 87:4576-4579. PubMed doi:10.1073/pnas.87.12.4576
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 4576-4579
-
-
Woese, C.R.1
Kandler, O.2
Wheelis, M.L.3
-
27
-
-
0000685441
-
The Road Map to the Ma-nual
-
In: Garrity GM, Boone DR, Castenholz RW (eds), Second Edition, Springer, New York
-
Garrity GM, Holt JG. The Road Map to the Ma-nual. In: Garrity GM, Boone DR, Castenholz RW (eds), Bergey's Manual of Systematic Bacteriology, Second Edition, Volume 1, Springer, New York, 2001, p. 119-169.
-
(2001)
Bergey's Manual of Systematic Bacteriology
, vol.1
, pp. 119-169
-
-
Garrity, G.M.1
Holt, J.G.2
-
28
-
-
70350704116
-
-
Taxonomic Outline
-
Ludwig W, Euzeby J, Whitman WG. Draft tax-onomic outline of the Bacteroidetes, Planctomy-cetes, Chlamydiae, Spirochaetes, Fibrobacteres, Fusobacteria, Acidobacteria, Verrucomicrobia, Dictyoglomi, and Gemmatimonadetes. http://www.bergeys.org/outlines/Bergeys_Vol_4_Outline.pdf. Taxonomic Outline 2008
-
(2008)
Draft Tax-onomic Outline of the Bacteroidetes, Planctomy-cetes, Chlamydiae, Spirochaetes, Fibrobacteres, Fusobacteria, Acidobacteria, Verrucomicrobia, Dictyoglomi, and Gemmatimonadetes
-
-
Ludwig, W.1
Euzeby, J.2
Whitman, W.G.3
-
29
-
-
0000685441
-
Taxonomic outline of the Archaea and Bacteria
-
In G. M. Garrity, D. R. Boone, and R. W. Castenholz (ed.), 2nd ed, Springer, New York
-
Garrity GM, Holt JG. 2001. Taxonomic outline of the Archaea and Bacteria, p. 155-166. In G. M. Garrity, D. R. Boone, and R. W. Castenholz (ed.), Bergey's Manual of Systematic Bacteriology, 2nd ed, vol. 1. Springer, New York.
-
(2001)
Bergey's Manual of Systematic Bacteriology
, vol.1
, pp. 155-166
-
-
Garrity, G.M.1
Holt, J.G.2
-
30
-
-
0042032933
-
Validation of the publication of new names and new combinations previously effectively pub-lished outside the IJSB. List No. 41
-
doi:10.1099/00207713-42-2-327
-
Validation of the publication of new names and new combinations previously effectively pub-lished outside the IJSB. List No. 41. Int J Syst Bac-teriol 1992; 42:327-328. doi:10.1099/00207713-42-2-327
-
(1992)
Int J Syst Bac-teriol
, vol.42
, pp. 327-328
-
-
-
31
-
-
0001702209
-
Order 1. Cytophagales Leadbet-ter 1974, 99AL
-
In: Holt JG (ed, First Edition, The Williams and Wilkins Co., Baltimore
-
Reichenbach H. Order 1. Cytophagales Leadbet-ter 1974, 99AL. In: Holt JG (ed), Bergey's Manual of Systematic Bacteriology, First Edition, Volume 3, The Williams and Wilkins Co., Baltimore, 1989, p. 2011-2013.
-
(1989)
Bergey's Manual of Systematic Bacteriology
, vol.3
, pp. 2011-2013
-
-
Reichenbach, H.1
-
32
-
-
0030052649
-
Cutting a Gordian knot: Emended classification and description of the ge-nus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavo-bacterium hydatis nom. nov. (Basonym, Cytopha-ga aquatilis Strohl and Tait 1978)
-
doi:10.1099/00207713-46-1-128
-
Bernardet JF, Segers P, Vancanneyt M, Berthe F, Kersters K, Vandamme P. Cutting a Gordian knot: emended classification and description of the ge-nus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavo-bacterium hydatis nom. nov. (Basonym, Cytopha-ga aquatilis Strohl and Tait 1978). Int J Syst Bacte-riol 1996; 46:128-148. doi:10.1099/00207713-46-1-128
-
(1996)
Int J Syst Bacte-riol
, vol.46
, pp. 128-148
-
-
Bernardet, J.F.1
Segers, P.2
Vancanneyt, M.3
Berthe, F.4
Kersters, K.5
Vandamme, P.6
-
33
-
-
0035989637
-
Proposed minimal standards for describing new taxa of the family Flavobacteriaceae, and emended descrip-tion of the family
-
PubMed doi:10.1099/ijs.0.02136-0
-
Bernardet JF, Nakagawa Y, Holmes B. Proposed minimal standards for describing new taxa of the family Flavobacteriaceae, and emended descrip-tion of the family. Int J Syst Evol Microbiol 2002; 52:1049-1070. PubMed doi:10.1099/ijs.0.02136-0
-
(2002)
Int J Syst Evol Microbiol
, vol.52
, pp. 1049-1070
-
-
Bernardet, J.F.1
Nakagawa, Y.2
Holmes, B.3
-
34
-
-
0005394230
-
-
Validation list No° 23, doi:10.1099/00207713-37-2-179
-
Validation list No° 23. Int J Syst Bacteriol 1987; 37:179-180. doi:10.1099/00207713-37-2-179
-
(1987)
Int J Syst Bacteriol
, vol.37
, pp. 179-180
-
-
-
36
-
-
0034069495
-
Gene Ontology: Tool for the unifi-cation of biology
-
PubMed doi:10.1038/75556
-
Ashburner M, Ball CA, Blake JA, Botstein D, But-ler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, et al. Gene Ontology: tool for the unifi-cation of biology. Nat Genet 2000; 25:25-29. PubMed doi:10.1038/75556
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
But-Ler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
-
37
-
-
84860347679
-
-
List of growth media used at DSMZ
-
List of growth media used at DSMZ: http://www.dsmz.de/microorganisms/media_list.php.
-
-
-
-
38
-
-
0027972091
-
New perspectives in the classification of the flavobacteria: Description of Chryseobacte-rium gen. nov., Bergeyella gen. nov., and Empe-dobacter nom. rev
-
doi:10.1099/00207713-44-4-827
-
Vandamme P, Bernardet JF, Segers P, Kersters K, Holmes B. New perspectives in the classification of the flavobacteria: description of Chryseobacte-rium gen. nov., Bergeyella gen. nov., and Empe-dobacter nom. rev. Int J Syst Bacteriol 1994; 44:827-831. doi:10.1099/00207713-44-4-827
-
(1994)
Int J Syst Bacteriol
, vol.44
, pp. 827-831
-
-
Vandamme, P.1
Bernardet, J.F.2
Segers, P.3
Kersters, K.4
Holmes, B.5
-
39
-
-
0035989637
-
Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended descrip-tion of the family
-
PubMed doi:10.1099/ijs.0.02136-0
-
Bernardet JF, Nakagawa Y, Holmes B. Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended descrip-tion of the family. Int J Syst Evol Microbiol 2002; 52:1049-1070. PubMed doi:10.1099/ijs.0.02136-0
-
(2002)
Int J Syst Evol Microbiol
, vol.52
, pp. 1049-1070
-
-
Bernardet, J.F.1
Nakagawa, Y.2
Holmes, B.3
-
40
-
-
0035232242
-
Polyamine distribution profiles in the eighteen genera phylogenetically located within the Flavobacterium-Flexibacter-Cytophaga complex
-
PubMed
-
Hamana K, Nakagawa Y. Polyamine distribution profiles in the eighteen genera phylogenetically located within the Flavobacterium-Flexibacter-Cytophaga complex. Microbios 2001; 106:7-17. PubMed
-
(2001)
Microbios
, vol.106
, pp. 7-17
-
-
Hamana, K.1
Nakagawa, Y.2
-
41
-
-
0028892974
-
Phenotypic characteristics, fatty acid composition, and isoprenoid quinone content of CDC group IIg bacteria
-
PubMed
-
Hollis DG, Daneshvar MI, Moss CW, Baker CN. Phenotypic characteristics, fatty acid composition, and isoprenoid quinone content of CDC group IIg bacteria. J Clin Microbiol 1995; 33:762-764. PubMed
-
(1995)
J Clin Microbiol
, vol.33
, pp. 762-764
-
-
Hollis, D.G.1
Daneshvar, M.I.2
Moss, C.W.3
Baker, C.N.4
-
42
-
-
77952889628
-
En route to a genome-based classification of Archaea and Bacteria?
-
PubMed doi:10.1016/j.syapm.2010.03.003
-
Klenk HP, Göker M. En route to a genome-based classification of Archaea and Bacteria? Syst Appl Microbiol 2010; 33:175-182. PubMed doi:10.1016/j.syapm.2010.03.003
-
(2010)
Syst Appl Microbiol
, vol.33
, pp. 175-182
-
-
Klenk, H.P.1
Göker, M.2
-
43
-
-
72949101201
-
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea
-
PubMed doi:10.1038/nature08656
-
Wu D, Hugenholtz P, Mavromatis K, Pukall R, Dalin E, Ivanova NN, Kunin V, Goodwin L, Wu M, Tindall BJ, et al. A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea. Nature 2009; 462:1056-1060. PubMed doi:10.1038/nature08656
-
(2009)
Nature
, vol.462
, pp. 1056-1060
-
-
Wu, D.1
Hugenholtz, P.2
Mavromatis, K.3
Pukall, R.4
Dalin, E.5
Ivanova, N.N.6
Kunin, V.7
Goodwin, L.8
Wu, M.9
Tindall, B.J.10
-
44
-
-
84860344442
-
-
In press
-
Gemeinholzer B, Dröge G, Zetzsche H, Haszpru-nar G, Klenk HP, Güntsch A, Berendsohn WG, Wägele JW. The DNA Bank Network: the start from a German initiative. Biopreservation and Biobanking (In press).
-
The DNA Bank Network: The Start From a German Initiative. Biopreservation and Biobanking
-
-
Gemeinholzer, B.1
Dröge, G.2
Zetzsche, H.3
Haszpru-Nar, G.4
Klenk, H.P.5
Güntsch, A.6
Berendsohn, W.G.7
Wägele, J.W.8
-
45
-
-
84860351198
-
-
DNA bank Network
-
DNA bank Network. http://www.dnabank-network.org
-
-
-
-
46
-
-
84860347680
-
-
DOE Joint Genome Institute
-
DOE Joint Genome Institute. http://www.jgi.doe.gov
-
-
-
-
47
-
-
43149115851
-
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
-
PubMed doi:10.1101/gr.074492.107
-
Zerbino DR, Birney E. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res 2008; 18:821-829. PubMed doi:10.1101/gr.074492.107
-
(2008)
Genome Res
, vol.18
, pp. 821-829
-
-
Zerbino, D.R.1
Birney, E.2
-
48
-
-
84857095295
-
-
MacOS, Linux, and Unix
-
Phrap and Phred for Windows. MacOS, Linux, and Unix. http://www.phrap.com
-
Phrap and Phred For Windows
-
-
-
49
-
-
80053349651
-
-
Proceeding of the 2006 international conference on bioinformatics & computational biology. Edited by Hamid R. Arabnia & Homayoun Valafar, CSREA Press. June 26-29, 2006
-
Han C, Chain P. 2006. Finishing repeat regions automatically with Dupfinisher. Proceeding of the 2006 international conference on bioinformatics & computational biology. Edited by Hamid R. Arabnia & Homayoun Valafar, CSREA Press. June 26-29, 2006: 141-146.
-
(2006)
Finishing Repeat Regions Automatically With Dupfinisher
, pp. 141-146
-
-
Han, C.1
Chain, P.2
-
50
-
-
80053373249
-
-
AGBT, Marco Island, FL
-
Lapidus A, LaButti K, Foster B, Lowry S, Trong S, Goltsman E. POLISHER: An effective tool for us-ing ultra short reads in microbial genome assem-bly and finishing. AGBT, Marco Island, FL, 2008.
-
(2008)
POLISHER: An Effective Tool For Us-ing Ultra Short Reads In Microbial Genome Assem-bly and Finishing
-
-
Lapidus, A.1
Labutti, K.2
Foster, B.3
Lowry, S.4
Trong, S.5
Goltsman, E.6
-
51
-
-
77952299957
-
Prodigal: Prokaryotic gene recognition and translation initiation site identifi-cation
-
PubMed doi:10.1186/1471-2105-11-119
-
Hyatt D, Chen GL, LoCascio PF, Land ML, Lari-mer FW, Hauser LJ. Prodigal: prokaryotic gene recognition and translation initiation site identifi-cation. BMC Bioinformatics 2010; 11:119. PubMed doi:10.1186/1471-2105-11-119
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 119
-
-
Hyatt, D.1
Chen, G.L.2
Locascio, P.F.3
Land, M.L.4
Lari-Mer, F.W.5
Hauser, L.J.6
-
52
-
-
77953023066
-
Gene-PRIMP: A gene prediction improvement pipeline for prokaryotic genomes
-
PubMed doi:10.1038/nmeth.1457
-
Pati A, Ivanova NN, Mikhailova N, Ovchinnikova G, Hooper SD, Lykidis A, Kyrpides NC. Gene-PRIMP: a gene prediction improvement pipeline for prokaryotic genomes. Nat Methods 2010; 7:455-457. PubMed doi:10.1038/nmeth.1457
-
(2010)
Nat Methods
, vol.7
, pp. 455-457
-
-
Pati, A.1
Ivanova, N.N.2
Mikhailova, N.3
Ovchinnikova, G.4
Hooper, S.D.5
Lykidis, A.6
Kyrpides, N.C.7
-
53
-
-
69949116874
-
IMG ER: A system for microbial ge-nome annotation expert review and curation
-
PubMed doi:10.1093/bioinformatics/btp393
-
Markowitz VM, Ivanova NN, Chen IMA, Chu K, Kyrpides NC. IMG ER: a system for microbial ge-nome annotation expert review and curation. Bio-informatics 2009; 25:2271-2278. PubMed doi:10.1093/bioinformatics/btp393
-
(2009)
Bio-informatics
, vol.25
, pp. 2271-2278
-
-
Markowitz, V.M.1
Ivanova, N.N.2
Chen, I.M.A.3
Chu, K.4
Kyrpides, N.C.5
-
54
-
-
0025934414
-
Re-sponse of Weeksella virosa peritonitis to imipe-nem/cilastin
-
PubMed
-
Faber MD, del Busto R, Cruz C, Mezger E. Re-sponse of Weeksella virosa peritonitis to imipe-nem/cilastin. Adv Perit Dial 1991; 7:133-134. PubMed
-
(1991)
Adv Perit Dial
, vol.7
, pp. 133-134
-
-
Faber, M.D.1
del Busto, R.2
Cruz, C.3
Mezger, E.4
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