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Volumn 129, Issue 11, 2011, Pages 2643-2650

High throughput sequencing reveals diversity of Human Papillomaviruses in cutaneous lesions

Author keywords

cutaneous lesions; high throughput sequencing; human papillomavirus; novel types

Indexed keywords

ACTINIC KERATOSIS; ARTICLE; CONTROLLED STUDY; FROZEN SECTION; GENE SEQUENCE; GENUS; HIGH THROUGHPUT SEQUENCING; HUMAN PAPILLOMAVIRUS TYPE 100; HUMAN PAPILLOMAVIRUS TYPE 104; HUMAN PAPILLOMAVIRUS TYPE 105; HUMAN PAPILLOMAVIRUS TYPE 107; HUMAN PAPILLOMAVIRUS TYPE 110; HUMAN PAPILLOMAVIRUS TYPE 111; HUMAN PAPILLOMAVIRUS TYPE 113; HUMAN PAPILLOMAVIRUS TYPE 119; HUMAN PAPILLOMAVIRUS TYPE 12; HUMAN PAPILLOMAVIRUS TYPE 120; HUMAN PAPILLOMAVIRUS TYPE 122; HUMAN PAPILLOMAVIRUS TYPE 123; HUMAN PAPILLOMAVIRUS TYPE 124; HUMAN PAPILLOMAVIRUS TYPE 14; HUMAN PAPILLOMAVIRUS TYPE 150; HUMAN PAPILLOMAVIRUS TYPE 151; HUMAN PAPILLOMAVIRUS TYPE 16; HUMAN PAPILLOMAVIRUS TYPE 17; HUMAN PAPILLOMAVIRUS TYPE 19; HUMAN PAPILLOMAVIRUS TYPE 20; HUMAN PAPILLOMAVIRUS TYPE 21; HUMAN PAPILLOMAVIRUS TYPE 23; HUMAN PAPILLOMAVIRUS TYPE 24; HUMAN PAPILLOMAVIRUS TYPE 25; HUMAN PAPILLOMAVIRUS TYPE 3; HUMAN PAPILLOMAVIRUS TYPE 36; HUMAN PAPILLOMAVIRUS TYPE 37; HUMAN PAPILLOMAVIRUS TYPE 38; HUMAN PAPILLOMAVIRUS TYPE 47; HUMAN PAPILLOMAVIRUS TYPE 49; HUMAN PAPILLOMAVIRUS TYPE 50; HUMAN PAPILLOMAVIRUS TYPE 65; HUMAN PAPILLOMAVIRUS TYPE 76; HUMAN PAPILLOMAVIRUS TYPE 77; HUMAN PAPILLOMAVIRUS TYPE 8; HUMAN PAPILLOMAVIRUS TYPE 80; HUMAN PAPILLOMAVIRUS TYPE 9; HUMAN PAPILLOMAVIRUS TYPE 92; HUMAN PAPILLOMAVIRUS TYPE 93; HUMAN PAPILLOMAVIRUS TYPE 96; HUMAN PAPILLOMAVIRUS TYPE 98; KERATOACANTHOMA; MICROBIAL DIVERSITY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; SKIN BIOPSY; SQUAMOUS CELL CARCINOMA; VIRUS IDENTIFICATION; VIRUS TYPING; WART VIRUS;

EID: 80053339671     PISSN: 00207136     EISSN: 10970215     Source Type: Journal    
DOI: 10.1002/ijc.26204     Document Type: Article
Times cited : (73)

References (50)
  • 1
    • 77950938389 scopus 로고    scopus 로고
    • Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments
    • Bernard HU, Burk RD, Chen Z, van Doorslaer K, Hausen H, de Villiers EM,. Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments. Virology 2010; 401: 70-9.
    • (2010) Virology , vol.401 , pp. 70-79
    • Bernard, H.U.1    Burk, R.D.2    Chen, Z.3    Van Doorslaer, K.4    Hausen, H.5    De Villiers, E.M.6
  • 4
    • 36348982759 scopus 로고    scopus 로고
    • Identification and characterization of two novel human papillomaviruses (HPVs) by overlapping PCR: HPV102 and HPV106
    • DOI 10.1099/vir.0.83178-0
    • Chen Z, Schiffman M, Herrero R, Burk RD,. Identification and characterization of two novel human papillomaviruses (HPVs) by overlapping PCR: HPV102 and HPV106. J Gen Virol 2007; 88: 2952-5. (Pubitemid 350138976)
    • (2007) Journal of General Virology , vol.88 , Issue.11 , pp. 2952-2955
    • Chen, Z.1    Schiffman, M.2    Herrero, R.3    Burk, R.D.4
  • 5
    • 33947725274 scopus 로고    scopus 로고
    • Human papillomavirus (HPV) types 101 and 103 isolated from cervicovaginal cells lack an E6 open reading frame (ORF) and are related to gamma-papillomaviruses
    • DOI 10.1016/j.virol.2006.10.022, PII S0042682206007793
    • Chen Z, Schiffman M, Herrero R, Desalle R, Burk RD,. Human papillomavirus (HPV) types 101 and 103 isolated from cervicovaginal cells lack an E6 open reading frame (ORF) and are related to gamma-papillomaviruses. Virology 2007; 360: 447-53. (Pubitemid 46505022)
    • (2007) Virology , vol.360 , Issue.2 , pp. 447-453
    • Chen, Z.1    Schiffman, M.2    Herrero, R.3    DeSalle, R.4    Burk, R.D.5
  • 6
    • 63149124929 scopus 로고    scopus 로고
    • E7 oncoprotein of novel human papillomavirus type 108 lacking the E6 gene induces dysplasia in organotypic keratinocyte cultures
    • Nobre RJ, Herraez-Hernandez E, Fei JW, Langbein L, Kaden S, Grone HJ, de Villiers EM,. E7 oncoprotein of novel human papillomavirus type 108 lacking the E6 gene induces dysplasia in organotypic keratinocyte cultures. J Virol 2009; 83: 2907-16.
    • (2009) J Virol , vol.83 , pp. 2907-2916
    • Nobre, R.J.1    Herraez-Hernandez, E.2    Fei, J.W.3    Langbein, L.4    Kaden, S.5    Grone, H.J.6    De Villiers, E.M.7
  • 7
    • 54449098227 scopus 로고    scopus 로고
    • Four novel human betapapillomaviruses of species 2 preferentially found in actinic keratosis
    • Vasiljevic N, Hazard K, Dillner J, Forslund O,. Four novel human betapapillomaviruses of species 2 preferentially found in actinic keratosis. J Gen Virol 2008; 89: 2467-74.
    • (2008) J Gen Virol , vol.89 , pp. 2467-2474
    • Vasiljevic, N.1    Hazard, K.2    Dillner, J.3    Forslund, O.4
  • 8
    • 75749116659 scopus 로고    scopus 로고
    • Three novel papillomaviruses (HPV109, HPV112 and HPV114) and their presence in cutaneous and mucosal samples
    • Ekstrom J, Forslund O, Dillner J,. Three novel papillomaviruses (HPV109, HPV112 and HPV114) and their presence in cutaneous and mucosal samples. Virology 2010; 397: 331-6.
    • (2010) Virology , vol.397 , pp. 331-336
    • Ekstrom, J.1    Forslund, O.2    Dillner, J.3
  • 10
    • 0033503596 scopus 로고    scopus 로고
    • Papillomaviruses in non-melanoma skin cancer: Epidemiological aspects
    • DOI 10.1006/scbi.1999.0143
    • Kiviat NB,. Papillomaviruses in non-melanoma skin cancer: epidemiological aspects. Semin Cancer Biol 1999; 9: 397-403. (Pubitemid 30184509)
    • (1999) Seminars in Cancer Biology , vol.9 , Issue.6 , pp. 397-403
    • Kiviat, N.B.1
  • 11
    • 0033795921 scopus 로고    scopus 로고
    • Incidence of skin cancer in 5356 patients following organ transplantation
    • Lindelof B, Sigurgeirsson B, Gabel H, Stern RS,. Incidence of skin cancer in 5356 patients following organ transplantation. Br J Dermatol 2000; 143: 513-9.
    • (2000) Br J Dermatol , vol.143 , pp. 513-519
    • Lindelof, B.1    Sigurgeirsson, B.2    Gabel, H.3    Stern, R.S.4
  • 12
    • 70349256093 scopus 로고    scopus 로고
    • Cancer incidence and risk factors after solid organ transplantation
    • Vajdic CM, van Leeuwen MT,. Cancer incidence and risk factors after solid organ transplantation. Int J Cancer 2009; 125: 1747-54.
    • (2009) Int J Cancer , vol.125 , pp. 1747-1754
    • Vajdic, C.M.1    Van Leeuwen, M.T.2
  • 17
    • 0032962425 scopus 로고    scopus 로고
    • Identification of DNA sequences of both genital and cutaneous HPV types in a small number of keratoacanthomas of nonimmunosuppressed patients
    • DOI 10.1159/000018086
    • Stockfleth E, Meinke B, Arndt R, Christophers E, Meyer T,. Identification of DNA sequences of both genital and cutaneous HPV types in a small number of keratoacanthomas of nonimmunosuppressed patients. Dermatology 1999; 198: 122-5. (Pubitemid 29204592)
    • (1999) Dermatology , vol.198 , Issue.2 , pp. 122-125
    • Stockfleth, E.1    Meinke, B.2    Arndt, R.3    Christophers, E.4    Meyer, T.5
  • 19
    • 0023818793 scopus 로고
    • Malignant transformations of solar keratoses to squamous cell carcinoma
    • Marks R, Rennie G, Selwood TS,. Malignant transformation of solar keratoses to squamous cell carcinoma. Lancet 1988; 1: 795-7. (Pubitemid 18094914)
    • (1988) Lancet , vol.1 , Issue.8589 , pp. 795-797
    • Marks, R.1    Rennie, G.2    Selwood, T.S.3
  • 20
    • 27144510955 scopus 로고    scopus 로고
    • Non-melanoma skin cancer: What drives tumor development and progression?
    • DOI 10.1093/carcin/bgi123
    • Boukamp P,. Non-melanoma skin cancer: what drives tumor development and progression? Carcinogenesis 2005; 26: 1657-67. (Pubitemid 41487981)
    • (2005) Carcinogenesis , vol.26 , Issue.10 , pp. 1657-1667
    • Boukamp, P.1
  • 21
    • 1542318591 scopus 로고    scopus 로고
    • Keratoacanthoma: A clinico-pathologic enigma
    • Skin Cancer
    • Schwartz RA,. Keratoacanthoma: a clinico-pathologic enigma. Dermatol Surg 2004; 30: 326-33; discussion 33. (Pubitemid 38313991)
    • (2004) Dermatologic Surgery , vol.30 , Issue.2 , pp. 326-333
    • Schwartz, R.A.1    Humphreys, T.2
  • 27
    • 0042563179 scopus 로고    scopus 로고
    • Nucleotide sequence and phylogenetic classification of candidate human papilloma virus type 92
    • DOI 10.1016/S0042-6822(03)00391-X
    • Forslund O, Antonsson A, Higgins G, Ly H, Delius H, Hunziker A, de Villiers EM,. Nucleotide sequence and phylogenetic classification of candidate human papilloma virus type 92. Virology 2003; 312: 255-60. (Pubitemid 36960003)
    • (2003) Virology , vol.312 , Issue.2 , pp. 255-260
    • Forslund, O.1    Antonsson, A.2    Higgins, G.3    Ly, H.4    Delius, H.5    Hunziker, A.6    De Villiers, E.-M.7
  • 31
    • 39749113080 scopus 로고    scopus 로고
    • Clonal integration of a polyomavirus in human Merkel cell carcinoma
    • DOI 10.1126/science.1152586
    • Feng H, Shuda M, Chang Y, Moore PS,. Clonal integration of a polyomavirus in human Merkel cell carcinoma. Science 2008; 319: 1096-100. (Pubitemid 351300792)
    • (2008) Science , vol.319 , Issue.5866 , pp. 1096-1100
    • Feng, H.1    Shuda, M.2    Chang, Y.3    Moore, P.S.4
  • 32
    • 0032859819 scopus 로고    scopus 로고
    • A broad range of human papillomavirus types detected with a general PCR method suitable for analysis of cutaneous tumours and normal skin
    • Forslund O, Antonsson A, Nordin P, Stenquist B, Hansson BG,. A broad range of human papillomavirus types detected with a general PCR method suitable for analysis of cutaneous tumours and normal skin. J Gen Virol 1999; 80 (Pt 9): 2437-43. (Pubitemid 29408373)
    • (1999) Journal of General Virology , vol.80 , Issue.9 , pp. 2437-2443
    • Forslund, O.1    Antonsson, A.2    Nordin, P.3    Stenquist, B.4    Hansson, B.G.5
  • 34
    • 3042631307 scopus 로고    scopus 로고
    • Genome sequence assembly using trace signals and additional sequence information, computer science and biology
    • Germany
    • Chevreux B, Wetter, T., and, Suhai, S., Genome sequence assembly using trace signals and additional sequence information, computer science and biology. Proceedings of the German Conference on Bioinformatics (GCB) 1999;12: 45-56, Germany.
    • (1999) Proceedings of the German Conference on Bioinformatics (GCB) , vol.12 , pp. 45-56
    • Chevreux, B.1    Wetter, T.2    Suhai, S.3
  • 35
    • 79951480123 scopus 로고    scopus 로고
    • R Development Core Team. Vienna, Austria, R Foundation for statistical computing.
    • R Development Core Team. R: a language and environment for statistical computing. Vienna, Austria, 2010. R Foundation for statistical computing.
    • (2010) R: A Language and Environment for Statistical Computing
  • 36
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck JP, Ronquist F,. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 2001; 17: 754-5. (Pubitemid 32851390)
    • (2001) Bioinformatics , vol.17 , Issue.8 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 37
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • DOI 10.1093/bioinformatics/btg180
    • Ronquist F, Huelsenbeck JP,. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003; 19: 1572-4. (Pubitemid 37038874)
    • (2003) Bioinformatics , vol.19 , Issue.12 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 38
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • Posada D, Crandall KA,. MODELTEST: testing the model of DNA substitution. Bioinformatics 1998; 14: 817-8. (Pubitemid 28552116)
    • (1998) Bioinformatics , vol.14 , Issue.9 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 39
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • DOI 10.1080/10635150390235520
    • Guindon S, Gascuel O,. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 2003; 52: 696-704. (Pubitemid 37365050)
    • (2003) Systematic Biology , vol.52 , Issue.5 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 40
    • 35048888421 scopus 로고    scopus 로고
    • Genetic diversity of cutaneous human papillomaviruses
    • DOI 10.1099/vir.0.82911-0
    • Forslund O,. Genetic diversity of cutaneous human papillomaviruses. J Gen Virol 2007; 88: 2662-9. (Pubitemid 47555018)
    • (2007) Journal of General Virology , vol.88 , Issue.10 , pp. 2662-2669
    • Forslund, O.1
  • 41
    • 0034466769 scopus 로고    scopus 로고
    • The ubiquity and impressive genomic diversity of human skin papillomaviruses suggest a commensalic nature of these viruses
    • DOI 10.1128/JVI.74.24.11636-11641.2000
    • Antonsson A, Forslund O, Ekberg H, Sterner G, Hansson BG,. The ubiquity and impressive genomic diversity of human skin papillomaviruses suggest a commensalic nature of these viruses. J Virol 2000; 74: 11636-41. (Pubitemid 32222312)
    • (2000) Journal of Virology , vol.74 , Issue.24 , pp. 11636-11641
    • Antonsson, A.1    Forslund, O.2    Ekberg, H.3    Sterner, G.4    Hansson, B.G.5
  • 43
    • 0037949471 scopus 로고    scopus 로고
    • A broad spectrum of human papillomavirus types is present in the skin of Australian patients with non-melanoma skin cancers and solar keratosis
    • DOI 10.1046/j.1365-2133.2003.05376.x
    • Forslund O, Ly H, Reid C, Higgins G,. A broad spectrum of human papillomavirus types is present in the skin of Australian patients with non-melanoma skin cancers and solar keratosis. Br J Dermatol 2003; 149: 64-73. (Pubitemid 36966512)
    • (2003) British Journal of Dermatology , vol.149 , Issue.1 , pp. 64-73
    • Forslund, O.1    Ly, H.2    Reid, C.3    Higgins, G.4
  • 44
    • 0038392722 scopus 로고    scopus 로고
    • Improved detection of cutaneous human papillomavirus DNA by single tube nested 'hanging droplet' PCR
    • DOI 10.1016/S0166-0934(03)00109-5
    • Forslund O, Ly H, Higgins G,. Improved detection of cutaneous human papillomavirus DNA by single tube nested "hanging droplet" PCR. J Virol Methods 2003; 110: 129-36. (Pubitemid 36645255)
    • (2003) Journal of Virological Methods , vol.110 , Issue.2 , pp. 129-136
    • Forslund, O.1    Ly, H.2    Higgins, G.3
  • 45
    • 34247246290 scopus 로고    scopus 로고
    • Human papillomavirus subtypes are not uncommon
    • DOI 10.1016/j.virol.2007.03.004, PII S004268220700147X
    • Hazard K, Andersson K, Dillner J, Forslund O,. Human Papillomavirus subtypes are not uncommon. Virology 2007; 362: 6-9. (Pubitemid 46617701)
    • (2007) Virology , vol.362 , Issue.1 , pp. 6-9
    • Hazard, K.1    Andersson, K.2    Dillner, J.3    Forslund, O.4
  • 48
    • 0037341278 scopus 로고    scopus 로고
    • Human papillomavirus-associated digital squamous cell carcinoma: Literature review and report of 21 new cases
    • DOI 10.1067/mjd.2003.184
    • Alam M, Caldwell JB, Eliezri YD,. Human papillomavirus-associated digital squamous cell carcinoma: literature review and report of 21 new cases. J Am Acad Dermatol 2003; 48: 385-93. (Pubitemid 36337075)
    • (2003) Journal of the American Academy of Dermatology , vol.48 , Issue.3 , pp. 385-393
    • Alam, M.1    Caldwell, J.B.2    Eliezri, Y.D.3
  • 49
    • 0242442472 scopus 로고    scopus 로고
    • The Prevalence of Human Papillomavirus Genotypes in Nonmelanoma Skin Cancers of Nonimmunosuppressed Individuals Identifies High-Risk Genital Types as Possible Risk Factors
    • Iftner A, Klug SJ, Garbe C, Blum A, Stancu A, Wilczynski SP, Iftner T,. The prevalence of human papillomavirus genotypes in nonmelanoma skin cancers of nonimmunosuppressed individuals identifies high-risk genital types as possible risk factors. Cancer Res 2003; 63: 7515-9. (Pubitemid 37413496)
    • (2003) Cancer Research , vol.63 , Issue.21 , pp. 7515-7519
    • Iftner, A.1    Klug, S.J.2    Garbe, C.3    Blum, A.4    Stancu, A.5    Wilczynski, S.P.6    Iftner, T.7
  • 50
    • 72649088376 scopus 로고    scopus 로고
    • Diversity of human papillomavirus types in periungual squamous cell carcinoma
    • Kreuter A, Gambichler T, Pfister H, Wieland U,. Diversity of human papillomavirus types in periungual squamous cell carcinoma. Br J Dermatol 2009; 161: 1262-9.
    • (2009) Br J Dermatol , vol.161 , pp. 1262-1269
    • Kreuter, A.1    Gambichler, T.2    Pfister, H.3    Wieland, U.4


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