Revisiting the Yeast PPR proteins-Application of an iterative hidden markov model algorithm reveals new members of the rapidly evolving family

Molecular Biology and Evolution

Volumn 28, Issue 10, 2011, Pages 2935-2948

  Lipinski, Kamil A ^a   Puchta, Olga ^a   Surendranath, Vineeth ^c   Kudla, Marek ^a   Golik, Pawel ^a,b  

^a UNIVERSITY OF WARSAW   (Poland)

^b INSTITUTE OF BIOCHEMISTRY AND BIOPHYSICS   (Poland)

^c MAX PLANCK INSTITUTE OF MOLECULAR CELL BIOLOGY AND GENETICS   (Germany)

Author keywords

hidden Markov model; mitochondria; pentatricopeptide repeats; PPR proteins; RNA binding; yeast

Indexed keywords

RNA BINDING PROTEIN;

ARTICLE; FUNGUS; GENE EXPRESSION; METAZOON; MITOCHONDRION; NONHUMAN; PHYLOGENY; PROTEIN INTERACTION; PROTEIN MOTIF; RNA PROCESSING; SACCHAROMYCES CEREVISIAE; YEAST;

ALGORITHMS; AMINO ACID SEQUENCE; CLUSTER ANALYSIS; EVOLUTION, MOLECULAR; GENOME, MITOCHONDRIAL; GENOMICS; MARKOV CHAINS; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA-BINDING PROTEINS; SACCHAROMYCES CEREVISIAE PROTEINS; SEQUENCE ALIGNMENT;

ANIMALIA; EMBRYOPHYTA; EUKARYOTA; FUNGI; METAZOA; SACCHAROMYCES CEREVISIAE;

EID: 80053201287     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msr120     Document Type: Article

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