Performance of hybrid programming models for multiscale cardiac simulations: Preparing for petascale computation

IEEE Transactions on Biomedical Engineering

Volumn 58, Issue 10 PART 2, 2011, Pages 2965-2969

  Pope, Bernard J ^a   Fitch, Blake G ^b   Pitman, Michael C ^b   Rice, John J ^b   Reumann, Matthias ^c,d  

^a Victorian Life Sciences Computation Initiative   (Australia)

^b IBM T J WATSON RESEARCH CENTER   (United States)

^c IBM Australia   (Australia)

^d UNIVERSITY OF MELBOURNE   (Australia)

Author keywords

High performance computing (HPC); hybrid programming models; multiphysics cardiac model; multiscale

Indexed keywords

CARDIAC SIMULATION; CODE COMPLEXITY; COMMUNICATION PHASIS; COMPUTATIONALLY EFFICIENT; HIGH PERFORMANCE COMPUTING SYSTEMS; HIGH-PERFORMANCE COMPUTING; HUMAN DISEASE; HYBRID MODEL; HYBRID PROGRAMMING MODEL; MEDICAL SCIENCE; MESSAGE PASSING INTERFACE; MPI PROCESS; MULTI-PHYSICS; MULTI-THREADING; MULTIPHYSICS MODEL; MULTISCALE MODELS; MULTISCALES; ORDERS OF MAGNITUDE; PETASCALE; PROCESSOR CORES; PTHREADS;

APPLICATION PROGRAMMING INTERFACES (API); COMPUTER PROGRAMMING; COMPUTER SIMULATION; COMPUTER SOFTWARE SELECTION AND EVALUATION; HEART; MESSAGE PASSING; MULTITASKING; REAL TIME SYSTEMS;

PHYSIOLOGICAL MODELS;

ALGORITHM; ARTICLE; COMPUTER PROGRAM; EVALUATION; HEART; HUMAN; INTERMETHOD COMPARISON; MESSAGE PASSING INTERFACE; MULTITHREADING; PERFORMANCE; SIMULATION;

COMPUTER SIMULATION; COMPUTING METHODOLOGIES; FEMALE; HUMANS; MODELS, CARDIOVASCULAR; MYOCYTES, CARDIAC; SOFTWARE; VISIBLE HUMAN PROJECTS;

EID: 80053140672     PISSN: 00189294     EISSN: 15582531     Source Type: Journal    
DOI: 10.1109/TBME.2011.2161580     Document Type: Article

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